RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 UBAC1Q9BSL1 405 aa19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 EXOC6BQ9Y2D4 811 aa19.6■□□□□ 0.73
NSMCE3-201ENST00000332303 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
NSMCE3-201ENST00000332303 GLRX3O76003 335 aaKnown RBP19.59■□□□□ 0.73
NSMCE3-201ENST00000332303 LUC7LQ9NQ29 371 aaKnown RBP19.59■□□□□ 0.73
NSMCE3-201ENST00000332303 MCM4P33991 863 aa19.59■□□□□ 0.73
NSMCE3-201ENST00000332303 TDO2P48775 406 aa19.58■□□□□ 0.73
NSMCE3-201ENST00000332303 SPC24Q8NBT2 197 aa19.58■□□□□ 0.73
NSMCE3-201ENST00000332303 SPATA32Q96LK8 384 aa19.58■□□□□ 0.73
NSMCE3-201ENST00000332303 PPFIBP1Q86W92 1011 aa19.58■□□□□ 0.72
NSMCE3-201ENST00000332303 ALDH1L2Q3SY69 923 aa19.58■□□□□ 0.72
NSMCE3-201ENST00000332303 SYCP1Q15431 976 aa19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 CCDC141Q6ZP82 1450 aa19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 STARD3NLO95772 234 aa19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 SSH1Q8WYL5 1049 aa19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 BCL11BQ9C0K0 894 aaPredicted RBP19.57■□□□□ 0.72
NSMCE3-201ENST00000332303 CEP57L1Q8IYX8 460 aa19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 LARP1Q6PKG0 1096 aaKnown RBP19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 NUTM2BA6NNL0 878 aaPredicted RBP19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 NUTM2EB1AL46 878 aaPredicted RBP19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 NUTM2AQ8IVF1 878 aaPredicted RBP19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.56■□□□□ 0.72
NSMCE3-201ENST00000332303 RARSP54136 660 aaKnown RBP19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 STK11IPQ8N1F8 1099 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 LRP2BPQ9P2M1 347 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 XPCQ01831 940 aaPredicted RBP19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 GRPEL1Q9HAV7 217 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 TMEM132AQ24JP5 1023 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 RAI14Q9P0K7 980 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 IDH1O75874 414 aaKnown RBP19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 IGHMBP2P38935 993 aaKnown RBP19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 MCM10Q7L590 875 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 BRPF3Q9ULD4 1205 aa19.55■□□□□ 0.72
NSMCE3-201ENST00000332303 DCTN1Q14203 1278 aa19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 WAPLQ7Z5K2 1190 aa19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 MX1P20591 662 aa19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 NOM1Q5C9Z4 860 aaKnown RBP19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 BMP2KQ9NSY1 1161 aaPredicted RBP19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 TAF7Q15545 349 aaPredicted RBP19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 WASF1Q92558 559 aa19.54■□□□□ 0.72
NSMCE3-201ENST00000332303 IMMTQ16891 758 aaKnown RBP19.53■□□□□ 0.72
NSMCE3-201ENST00000332303 CBFA2T2O43439 604 aa19.53■□□□□ 0.72
NSMCE3-201ENST00000332303 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
NSMCE3-201ENST00000332303 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
NSMCE3-201ENST00000332303 NUTM1Q86Y26 1132 aa19.53■□□□□ 0.72
NSMCE3-201ENST00000332303 ZHX3Q9H4I2 956 aa19.53■□□□□ 0.72
NSMCE3-201ENST00000332303 U3KPZ7 1027 aaPredicted RBP19.52■□□□□ 0.72
NSMCE3-201ENST00000332303 TXLNBQ8N3L3 684 aa19.52■□□□□ 0.72
NSMCE3-201ENST00000332303 AIDAQ96BJ3 306 aa19.52■□□□□ 0.72
NSMCE3-201ENST00000332303 AKAP2Q9Y2D5 859 aa19.52■□□□□ 0.72
NSMCE3-201ENST00000332303 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
NSMCE3-201ENST00000332303 HMGB2P26583 209 aaKnown RBP19.52■□□□□ 0.71
NSMCE3-201ENST00000332303 WWC2Q6AWC2 1192 aa19.51■□□□□ 0.71
NSMCE3-201ENST00000332303 DEF6Q9H4E7 631 aa19.51■□□□□ 0.71
NSMCE3-201ENST00000332303 PDCL3Q9H2J4 239 aa19.51■□□□□ 0.71
NSMCE3-201ENST00000332303 MAGI1Q96QZ7 1491 aaPredicted RBP19.51■□□□□ 0.71
NSMCE3-201ENST00000332303 CASTP20810 708 aaKnown RBP19.51■□□□□ 0.71
NSMCE3-201ENST00000332303 METTL24Q5JXM2 366 aa19.5■□□□□ 0.71
NSMCE3-201ENST00000332303 CCDC112Q8NEF3 446 aa19.5■□□□□ 0.71
NSMCE3-201ENST00000332303 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
NSMCE3-201ENST00000332303 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
NSMCE3-201ENST00000332303 ABCF2Q9UG63 623 aa19.5■□□□□ 0.71
NSMCE3-201ENST00000332303 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
NSMCE3-201ENST00000332303 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
NSMCE3-201ENST00000332303 ARHGEF11O15085 1522 aa19.49■□□□□ 0.71
NSMCE3-201ENST00000332303 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
NSMCE3-201ENST00000332303 NME9Q86XW9 330 aa19.49■□□□□ 0.71
NSMCE3-201ENST00000332303 CWC15Q9P013 229 aaKnown RBP19.49■□□□□ 0.71
NSMCE3-201ENST00000332303 TANGO6Q9C0B7 1094 aa19.49■□□□□ 0.71
NSMCE3-201ENST00000332303 RBM5P52756 815 aaKnown RBP eCLIP19.48■□□□□ 0.71
NSMCE3-201ENST00000332303 ZSCAN29Q8IWY8 852 aaPredicted RBP19.48■□□□□ 0.71
NSMCE3-201ENST00000332303 IFIT1P09914 478 aaKnown RBP19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 H0YHG0 523 aa19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 SSBP05455 408 aaKnown RBP eCLIP19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 ZNF652Q9Y2D9 606 aa19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 ERLIN2O94905 339 aa19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 FILIP1Q7Z7B0 1213 aa19.47■□□□□ 0.71
NSMCE3-201ENST00000332303 C11orf95C9JLR9 678 aaPredicted RBP19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 MAP3K11Q16584 847 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 AXDND1Q5T1B0 1012 aaPredicted RBP19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 MPNDQ8N594 471 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 PHF8Q9UPP1 1060 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 SMTNL1A8MU46 457 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 EMILIN1Q9Y6C2 1016 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 FERMT3Q86UX7 667 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 ZNF287Q9HBT7 754 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 CD109Q6YHK3 1445 aa19.46■□□□□ 0.71
NSMCE3-201ENST00000332303 DNAAF4Q8WXU2 420 aa19.45■□□□□ 0.7
NSMCE3-201ENST00000332303 BOLA2Q9H3K6 86 aa19.45■□□□□ 0.7
NSMCE3-201ENST00000332303 TMOD3Q9NYL9 352 aa19.45■□□□□ 0.7
NSMCE3-201ENST00000332303 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
NSMCE3-201ENST00000332303 NKTRP30414 1462 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms