RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLN8-201ENST00000331222 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 CCDC144CPQ8IYA2 1237 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 JAKMIP1Q96N16 626 aaKnown RBP12.44□□□□□ -0.42
CLN8-201ENST00000331222 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 CEP57L1Q8IYX8 460 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 DRC1Q96MC2 740 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 MKNK2Q9HBH9 465 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 HIP1O00291 1037 aa12.43□□□□□ -0.42
CLN8-201ENST00000331222 CCDC112Q8NEF3 446 aa12.43□□□□□ -0.42
CLN8-201ENST00000331222 IGHMBP2P38935 993 aaKnown RBP12.43□□□□□ -0.42
CLN8-201ENST00000331222 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
CLN8-201ENST00000331222 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
CLN8-201ENST00000331222 PPFIA3O75145 1194 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 MMRN2Q9H8L6 949 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 CWC15Q9P013 229 aaKnown RBP12.42□□□□□ -0.42
CLN8-201ENST00000331222 VAT1LQ9HCJ6 419 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 AFAP1Q8N556 730 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
CLN8-201ENST00000331222 COMMD10Q9Y6G5 202 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
CLN8-201ENST00000331222 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
CLN8-201ENST00000331222 NOL7Q9UMY1 257 aaKnown RBP12.42□□□□□ -0.42
CLN8-201ENST00000331222 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
CLN8-201ENST00000331222 DESP17661 470 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 ZBTB9Q96C00 473 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 TERF1P54274 439 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
CLN8-201ENST00000331222 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
CLN8-201ENST00000331222 AIDAQ96BJ3 306 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 KIAA0754O94854 1291 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 UBE4AQ14139 1066 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 FILIP1Q7Z7B0 1213 aa12.41□□□□□ -0.42
CLN8-201ENST00000331222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLN8-201ENST00000331222 LETM1O95202 739 aaPredicted RBP12.4□□□□□ -0.42
CLN8-201ENST00000331222 VTI1AQ96AJ9 217 aa12.4□□□□□ -0.42
CLN8-201ENST00000331222 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
CLN8-201ENST00000331222 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
CLN8-201ENST00000331222 DZIP1Q86YF9 867 aaKnown RBP12.4□□□□□ -0.42
CLN8-201ENST00000331222 CCDC178Q5BJE1 867 aa12.4□□□□□ -0.42
CLN8-201ENST00000331222 RANBP6O60518 1105 aaKnown RBP12.4□□□□□ -0.42
CLN8-201ENST00000331222 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
CLN8-201ENST00000331222 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 BRPF3Q9ULD4 1205 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 EZRP15311 586 aaKnown RBP12.39□□□□□ -0.43
CLN8-201ENST00000331222 GPTP24298 496 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 PUF60Q9UHX1 559 aaKnown RBP12.39□□□□□ -0.43
CLN8-201ENST00000331222 PDCP20941 246 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 MYD88Q99836 296 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 LUC7LQ9NQ29 371 aaKnown RBP12.39□□□□□ -0.43
CLN8-201ENST00000331222 KIF7Q2M1P5 1343 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 JMYQ8N9B5 988 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
CLN8-201ENST00000331222 NF2P35240 595 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 TRIM21P19474 475 aaKnown RBP12.38□□□□□ -0.43
CLN8-201ENST00000331222 BLOC1S2Q6QNY1 142 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 ZNF354CQ86Y25 554 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 RPGRQ92834 1020 aaKnown RBP12.38□□□□□ -0.43
CLN8-201ENST00000331222 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
CLN8-201ENST00000331222 RAB11FIP4Q86YS3 637 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 PPP4R3AQ6IN85 833 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
CLN8-201ENST00000331222 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLN8-201ENST00000331222 TNIP1Q15025 636 aa12.37□□□□□ -0.43
CLN8-201ENST00000331222 USP8P40818 1118 aa12.37□□□□□ -0.43
CLN8-201ENST00000331222 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
CLN8-201ENST00000331222 SAMM50Q9Y512 469 aa12.37□□□□□ -0.43
CLN8-201ENST00000331222 EXOC6BQ9Y2D4 811 aa12.37□□□□□ -0.43
CLN8-201ENST00000331222 MCM10Q7L590 875 aa12.37□□□□□ -0.43
CLN8-201ENST00000331222 JAKMIP3Q5VZ66 844 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 FERMT3Q86UX7 667 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 CFAP100Q494V2 611 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 CAVIN4Q5BKX8 364 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
CLN8-201ENST00000331222 MAP2K1Q02750 393 aaPredicted RBP12.36□□□□□ -0.43
CLN8-201ENST00000331222 TMOD3Q9NYL9 352 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 STARD3NLO95772 234 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 C6orf229H3BNL8 230 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
CLN8-201ENST00000331222 KRT85P78386 507 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 CCDC83Q8IWF9 413 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 FERMT2Q96AC1 680 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 CCP110O43303 1012 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 ANKRD1Q15327 319 aa12.35□□□□□ -0.43
CLN8-201ENST00000331222 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
CLN8-201ENST00000331222 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms