RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
CLSTN3-202ENST00000331148 TMPOP42166 694 aaKnown RBP22.37■■□□□ 1.17
CLSTN3-202ENST00000331148 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.37■■□□□ 1.17
CLSTN3-202ENST00000331148 IL16Q14005 1332 aa22.36■■□□□ 1.17
CLSTN3-202ENST00000331148 NCKAP5LQ9HCH0 1330 aa22.36■■□□□ 1.17
CLSTN3-202ENST00000331148 CAVIN1Q6NZI2 390 aaKnown RBP22.36■■□□□ 1.17
CLSTN3-202ENST00000331148 PLEKHF1Q96S99 279 aa22.36■■□□□ 1.17
CLSTN3-202ENST00000331148 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
CLSTN3-202ENST00000331148 ANKRD45Q5TZF3 282 aa22.35■■□□□ 1.17
CLSTN3-202ENST00000331148 RBSNQ9H1K0 784 aa22.35■■□□□ 1.17
CLSTN3-202ENST00000331148 UQCRHLA0A096LP55 91 aa22.34■■□□□ 1.17
CLSTN3-202ENST00000331148 UQCRHP07919 91 aa22.34■■□□□ 1.17
CLSTN3-202ENST00000331148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLSTN3-202ENST00000331148 CDC42BPGQ6DT37 1551 aa22.34■■□□□ 1.17
CLSTN3-202ENST00000331148 XPCQ01831 940 aaPredicted RBP22.33■■□□□ 1.17
CLSTN3-202ENST00000331148 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
CLSTN3-202ENST00000331148 LMBRD1Q9NUN5 540 aa22.33■■□□□ 1.17
CLSTN3-202ENST00000331148 EDC4Q6P2E9 1401 aaKnown RBP22.33■■□□□ 1.17
CLSTN3-202ENST00000331148 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.16
CLSTN3-202ENST00000331148 NPHP4O75161 1426 aaPredicted RBP22.32■■□□□ 1.16
CLSTN3-202ENST00000331148 CHD2O14647 1828 aaKnown RBP22.32■■□□□ 1.16
CLSTN3-202ENST00000331148 KIF20BQ96Q89 1820 aa22.32■■□□□ 1.16
CLSTN3-202ENST00000331148 NUTM2FA1L443 756 aa22.32■■□□□ 1.16
CLSTN3-202ENST00000331148 CYP2E1P05181 493 aaPredicted RBP22.32■■□□□ 1.16
CLSTN3-202ENST00000331148 NUCB2P80303 420 aa22.32■■□□□ 1.16
CLSTN3-202ENST00000331148 CDC45O75419 566 aa22.31■■□□□ 1.16
CLSTN3-202ENST00000331148 ALDH1L2Q3SY69 923 aa22.31■■□□□ 1.16
CLSTN3-202ENST00000331148 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
CLSTN3-202ENST00000331148 U2SURPO15042 1029 aaKnown RBP22.3■■□□□ 1.16
CLSTN3-202ENST00000331148 ZKSCAN5Q9Y2L8 839 aa22.3■■□□□ 1.16
CLSTN3-202ENST00000331148 PRIM1P49642 420 aaKnown RBP22.29■■□□□ 1.16
CLSTN3-202ENST00000331148 RABEP1Q15276 862 aa22.29■■□□□ 1.16
CLSTN3-202ENST00000331148 TOPAZ1Q8N9V7 1692 aa22.29■■□□□ 1.16
CLSTN3-202ENST00000331148 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
CLSTN3-202ENST00000331148 ITSN1Q15811 1721 aa22.29■■□□□ 1.16
CLSTN3-202ENST00000331148 CSPP1Q1MSJ5 1256 aa22.28■■□□□ 1.16
CLSTN3-202ENST00000331148 MON2Q7Z3U7 1717 aa22.28■■□□□ 1.16
CLSTN3-202ENST00000331148 DYNC1I1O14576 645 aa22.28■■□□□ 1.16
CLSTN3-202ENST00000331148 MTERF4Q7Z6M4 381 aaKnown RBP22.28■■□□□ 1.16
CLSTN3-202ENST00000331148 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.16
CLSTN3-202ENST00000331148 MCM5P33992 734 aa22.27■■□□□ 1.16
CLSTN3-202ENST00000331148 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
CLSTN3-202ENST00000331148 ACEP12821 1306 aa22.27■■□□□ 1.16
CLSTN3-202ENST00000331148 ZBTB7BO15156 539 aaPredicted RBP22.26■■□□□ 1.15
CLSTN3-202ENST00000331148 C1orf115Q9H7X2 142 aa22.26■■□□□ 1.15
CLSTN3-202ENST00000331148 PKP1Q13835 747 aa22.26■■□□□ 1.15
CLSTN3-202ENST00000331148 NME9Q86XW9 330 aa22.24■■□□□ 1.15
CLSTN3-202ENST00000331148 SMAP1Q8IYB5 467 aaPredicted RBP22.24■■□□□ 1.15
CLSTN3-202ENST00000331148 GPT2Q8TD30 523 aa22.24■■□□□ 1.15
CLSTN3-202ENST00000331148 RBM27Q9P2N5 1060 aaKnown RBP22.24■■□□□ 1.15
CLSTN3-202ENST00000331148 AK9Q5TCS8 1911 aa22.24■■□□□ 1.15
CLSTN3-202ENST00000331148 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
CLSTN3-202ENST00000331148 SASS6Q6UVJ0 657 aa22.23■■□□□ 1.15
CLSTN3-202ENST00000331148 CHMP4BQ9H444 224 aaKnown RBP22.23■■□□□ 1.15
CLSTN3-202ENST00000331148 CCDC39Q9UFE4 941 aa22.23■■□□□ 1.15
CLSTN3-202ENST00000331148 GSPT1P15170 499 aaKnown RBP22.23■■□□□ 1.15
CLSTN3-202ENST00000331148 PRPF40AO75400 957 aaKnown RBP22.22■■□□□ 1.15
CLSTN3-202ENST00000331148 SIRT2Q8IXJ6 389 aa22.22■■□□□ 1.15
CLSTN3-202ENST00000331148 LRSAM1Q6UWE0 723 aa22.21■■□□□ 1.15
CLSTN3-202ENST00000331148 CWC22Q9HCG8 908 aaKnown RBP22.21■■□□□ 1.15
CLSTN3-202ENST00000331148 COG3Q96JB2 828 aa22.2■■□□□ 1.15
CLSTN3-202ENST00000331148 ANKARQ7Z5J8 1434 aa22.2■■□□□ 1.15
CLSTN3-202ENST00000331148 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.14
CLSTN3-202ENST00000331148 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
CLSTN3-202ENST00000331148 USP6P35125 1406 aa22.19■■□□□ 1.14
CLSTN3-202ENST00000331148 ZNF428Q96B54 188 aa22.19■■□□□ 1.14
CLSTN3-202ENST00000331148 ZRANB1Q9UGI0 708 aa22.19■■□□□ 1.14
CLSTN3-202ENST00000331148 ARID3AQ99856 593 aa22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 TMEM63CQ9P1W3 806 aa22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 FMN2Q9NZ56 1722 aa22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 CFAP44Q96MT7 982 aa22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 USP26Q9BXU7 913 aa22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 POLKQ9UBT6 870 aa22.18■■□□□ 1.14
CLSTN3-202ENST00000331148 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 SYCE3A1L190 88 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 ARHGAP45Q92619 1136 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 RBM33Q96EV2 1170 aaKnown RBP22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 PNPLA6Q8IY17 1366 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 NALCNQ8IZF0 1738 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 PLEKHM2Q8IWE5 1019 aa22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 ZGPATQ8N5A5 531 aaKnown RBP22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 MRPL50Q8N5N7 158 aaKnown RBP22.17■■□□□ 1.14
CLSTN3-202ENST00000331148 FBLN1P23142 703 aa22.16■■□□□ 1.14
CLSTN3-202ENST00000331148 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
CLSTN3-202ENST00000331148 MAP2P11137 1827 aaKnown RBP22.15■■□□□ 1.14
CLSTN3-202ENST00000331148 AATKQ6ZMQ8 1374 aa22.15■■□□□ 1.14
CLSTN3-202ENST00000331148 ABCC4O15439 1325 aa22.15■■□□□ 1.14
CLSTN3-202ENST00000331148 TTC22Q5TAA0 569 aa22.15■■□□□ 1.14
CLSTN3-202ENST00000331148 NWD1Q149M9 1564 aa22.14■■□□□ 1.14
CLSTN3-202ENST00000331148 SSH2Q76I76 1423 aa22.14■■□□□ 1.13
CLSTN3-202ENST00000331148 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.13
CLSTN3-202ENST00000331148 PODXL2Q9NZ53 605 aa22.14■■□□□ 1.13
CLSTN3-202ENST00000331148 ADGRL3Q9HAR2 1447 aa22.13■■□□□ 1.13
CLSTN3-202ENST00000331148 ST18O60284 1047 aa22.13■■□□□ 1.13
CLSTN3-202ENST00000331148 NSFL1CQ9UNZ2 370 aaKnown RBP22.13■■□□□ 1.13
CLSTN3-202ENST00000331148 TTC21AQ8NDW8 1320 aa22.13■■□□□ 1.13
CLSTN3-202ENST00000331148 INTS3Q68E01 1043 aaKnown RBP22.12■■□□□ 1.13
CLSTN3-202ENST00000331148 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms