RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 DEFB132Q7Z7B7 95 aa25.53■■□□□ 1.68
MRPL54-201ENST00000330133 APBA3O96018 575 aa25.52■■□□□ 1.68
MRPL54-201ENST00000330133 SPG7Q9UQ90 795 aa25.52■■□□□ 1.68
MRPL54-201ENST00000330133 BCL11BQ9C0K0 894 aaPredicted RBP25.51■■□□□ 1.67
MRPL54-201ENST00000330133 SULT6B1Q6IMI4 303 aa25.5■■□□□ 1.67
MRPL54-201ENST00000330133 EP400Q96L91 3159 aa25.5■■□□□ 1.67
MRPL54-201ENST00000330133 PCDH11XQ9BZA7 1347 aa25.49■■□□□ 1.67
MRPL54-201ENST00000330133 PCDH11YQ9BZA8 1340 aa25.49■■□□□ 1.67
MRPL54-201ENST00000330133 ACSBG1Q96GR2 724 aa25.49■■□□□ 1.67
MRPL54-201ENST00000330133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.49■■□□□ 1.67
MRPL54-201ENST00000330133 PARD3Q8TEW0 1356 aa25.48■■□□□ 1.67
MRPL54-201ENST00000330133 EN1Q05925 392 aaPredicted RBP25.48■■□□□ 1.67
MRPL54-201ENST00000330133 RALBP1Q15311 655 aa25.48■■□□□ 1.67
MRPL54-201ENST00000330133 RGPD1P0DJD0 1748 aa25.47■■□□□ 1.67
MRPL54-201ENST00000330133 AEBP1Q8IUX7 1158 aa25.47■■□□□ 1.67
MRPL54-201ENST00000330133 U2SURPO15042 1029 aaKnown RBP25.45■■□□□ 1.66
MRPL54-201ENST00000330133 PLEKHO1Q53GL0 409 aaPredicted RBP25.45■■□□□ 1.66
MRPL54-201ENST00000330133 PLEKHG2Q9H7P9 1386 aa25.44■■□□□ 1.66
MRPL54-201ENST00000330133 KCNQ2O43526 872 aa25.44■■□□□ 1.66
MRPL54-201ENST00000330133 NUDCQ9Y266 331 aa25.44■■□□□ 1.66
MRPL54-201ENST00000330133 CYP27B1O15528 508 aa25.43■■□□□ 1.66
MRPL54-201ENST00000330133 HMOX1P09601 288 aa25.43■■□□□ 1.66
MRPL54-201ENST00000330133 AMOTQ4VCS5 1084 aa25.43■■□□□ 1.66
MRPL54-201ENST00000330133 PTF1AQ7RTS3 328 aa25.43■■□□□ 1.66
MRPL54-201ENST00000330133 CAMKK2Q96RR4 588 aa25.42■■□□□ 1.66
MRPL54-201ENST00000330133 KDRP35968 1356 aa25.42■■□□□ 1.66
MRPL54-201ENST00000330133 COL3A1P02461 1466 aaPredicted RBP25.41■■□□□ 1.66
MRPL54-201ENST00000330133 EZH2Q15910 746 aaKnown RBP25.41■■□□□ 1.66
MRPL54-201ENST00000330133 IFNL2Q8IZJ0 200 aa25.41■■□□□ 1.66
MRPL54-201ENST00000330133 PLSCR1O15162 318 aa25.4■■□□□ 1.66
MRPL54-201ENST00000330133 PRIM1P49642 420 aaKnown RBP25.4■■□□□ 1.66
MRPL54-201ENST00000330133 SYTL4Q96C24 671 aaPredicted RBP25.4■■□□□ 1.66
MRPL54-201ENST00000330133 TNS1Q9HBL0 1735 aaKnown RBP25.39■■□□□ 1.65
MRPL54-201ENST00000330133 PHKG2P15735 406 aa25.38■■□□□ 1.65
MRPL54-201ENST00000330133 NKX1-1Q15270 411 aaPredicted RBP25.38■■□□□ 1.65
MRPL54-201ENST00000330133 ZNF530Q6P9A1 599 aaPredicted RBP25.37■■□□□ 1.65
MRPL54-201ENST00000330133 SBF2Q86WG5 1849 aa25.36■■□□□ 1.65
MRPL54-201ENST00000330133 SHANK3Q9BYB0 1731 aa25.36■■□□□ 1.65
MRPL54-201ENST00000330133 MYBBP1AQ9BQG0 1328 aaKnown RBP25.36■■□□□ 1.65
MRPL54-201ENST00000330133 PKD1L3Q7Z443 1732 aa25.35■■□□□ 1.65
MRPL54-201ENST00000330133 HSP90AB1P08238 724 aaKnown RBP25.35■■□□□ 1.65
MRPL54-201ENST00000330133 C1orf141Q5JVX7 400 aa25.35■■□□□ 1.65
MRPL54-201ENST00000330133 U2AF1L5P0DN76 240 aaPredicted RBP25.34■■□□□ 1.65
MRPL54-201ENST00000330133 U2AF1Q01081 240 aaKnown RBP eCLIP25.34■■□□□ 1.65
MRPL54-201ENST00000330133 PRKRIP1Q9H875 184 aaPredicted RBP25.33■■□□□ 1.65
MRPL54-201ENST00000330133 NHSQ6T4R5 1651 aa25.32■■□□□ 1.64
MRPL54-201ENST00000330133 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
MRPL54-201ENST00000330133 DCAF5Q96JK2 942 aa25.3■■□□□ 1.64
MRPL54-201ENST00000330133 TXNRD1Q16881 649 aa25.29■■□□□ 1.64
MRPL54-201ENST00000330133 FCHSD2O94868 740 aa25.28■■□□□ 1.64
MRPL54-201ENST00000330133 MTHFSDQ2M296 383 aaKnown RBP25.28■■□□□ 1.64
MRPL54-201ENST00000330133 AKAP4Q5JQC9 854 aa25.28■■□□□ 1.64
MRPL54-201ENST00000330133 RSPH6AQ9H0K4 717 aa25.28■■□□□ 1.64
MRPL54-201ENST00000330133 PRKAR2BP31323 418 aa25.27■■□□□ 1.64
MRPL54-201ENST00000330133 NBPF14Q5TI25 921 aa25.27■■□□□ 1.64
MRPL54-201ENST00000330133 PROM2Q8N271 834 aa25.27■■□□□ 1.64
MRPL54-201ENST00000330133 KAT6BQ8WYB5 2073 aa25.26■■□□□ 1.63
MRPL54-201ENST00000330133 ERVV-2B6SEH9 535 aa25.26■■□□□ 1.63
MRPL54-201ENST00000330133 TMOD3Q9NYL9 352 aa25.26■■□□□ 1.63
MRPL54-201ENST00000330133 DOT1LQ8TEK3 1739 aa25.26■■□□□ 1.63
MRPL54-201ENST00000330133 GAS2L2Q8NHY3 880 aa25.25■■□□□ 1.63
MRPL54-201ENST00000330133 PIGBQ92521 554 aa25.24■■□□□ 1.63
MRPL54-201ENST00000330133 CABP4P57796 275 aa25.23■■□□□ 1.63
MRPL54-201ENST00000330133 SMARCC1Q92922 1105 aaPredicted RBP25.23■■□□□ 1.63
MRPL54-201ENST00000330133 BTAF1O14981 1849 aa25.22■■□□□ 1.63
MRPL54-201ENST00000330133 ANP32CO43423 234 aa25.22■■□□□ 1.63
MRPL54-201ENST00000330133 NEFMP07197 916 aa25.22■■□□□ 1.63
MRPL54-201ENST00000330133 PNNQ9H307 717 aaKnown RBP25.22■■□□□ 1.63
MRPL54-201ENST00000330133 SLC27A3Q5K4L6 730 aa25.21■■□□□ 1.63
MRPL54-201ENST00000330133 PHACTR3Q96KR7 559 aa25.21■■□□□ 1.63
MRPL54-201ENST00000330133 RGPD3A6NKT7 1758 aaPredicted RBP25.21■■□□□ 1.63
MRPL54-201ENST00000330133 RGPD4Q7Z3J3 1758 aa25.21■■□□□ 1.63
MRPL54-201ENST00000330133 KDM6AO15550 1401 aaPredicted RBP25.2■■□□□ 1.62
MRPL54-201ENST00000330133 R3HDM1Q15032 1099 aaKnown RBP25.19■■□□□ 1.62
MRPL54-201ENST00000330133 RREB1Q92766 1687 aa25.18■■□□□ 1.62
MRPL54-201ENST00000330133 PSDA5PKW4 1024 aaPredicted RBP25.18■■□□□ 1.62
MRPL54-201ENST00000330133 RNMTO43148 476 aaKnown RBP25.18■■□□□ 1.62
MRPL54-201ENST00000330133 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
MRPL54-201ENST00000330133 LGR6Q9HBX8 967 aa25.17■■□□□ 1.62
MRPL54-201ENST00000330133 CCNL1Q9UK58 526 aaPredicted RBP25.17■■□□□ 1.62
MRPL54-201ENST00000330133 TOGARAM1Q9Y4F4 1720 aa25.17■■□□□ 1.62
MRPL54-201ENST00000330133 PALLDQ8WX93 1383 aa25.17■■□□□ 1.62
MRPL54-201ENST00000330133 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.62
MRPL54-201ENST00000330133 LRRC4BQ9NT99 713 aa25.16■■□□□ 1.62
MRPL54-201ENST00000330133 STK32BQ9NY57 414 aa25.16■■□□□ 1.62
MRPL54-201ENST00000330133 ASAP1Q9ULH1 1129 aa25.16■■□□□ 1.62
MRPL54-201ENST00000330133 HMGB2P26583 209 aaKnown RBP25.15■■□□□ 1.62
MRPL54-201ENST00000330133 NFATC2IPQ8NCF5 419 aa25.15■■□□□ 1.62
MRPL54-201ENST00000330133 MAP3K5Q99683 1374 aa25.15■■□□□ 1.62
MRPL54-201ENST00000330133 ATG3Q9NT62 314 aa25.14■■□□□ 1.62
MRPL54-201ENST00000330133 NUP188Q5SRE5 1749 aa25.14■■□□□ 1.61
MRPL54-201ENST00000330133 KCNQ4P56696 695 aa25.13■■□□□ 1.61
MRPL54-201ENST00000330133 SLC52A2Q9HAB3 445 aa25.13■■□□□ 1.61
MRPL54-201ENST00000330133 ANO8Q9HCE9 1232 aaPredicted RBP25.13■■□□□ 1.61
MRPL54-201ENST00000330133 MAPK8IP3Q9UPT6 1336 aa25.12■■□□□ 1.61
MRPL54-201ENST00000330133 PLEKHF1Q96S99 279 aa25.12■■□□□ 1.61
MRPL54-201ENST00000330133 ITGB4P16144 1822 aa25.12■■□□□ 1.61
MRPL54-201ENST00000330133 SLC15A2Q16348 729 aa25.11■■□□□ 1.61
MRPL54-201ENST00000330133 RTF1Q92541 710 aaKnown RBP25.11■■□□□ 1.61
MRPL54-201ENST00000330133 IL17REQ8NFR9 667 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms