RNA–Protein interactions for RNA: ENST00000328834.9

CNOT10-201, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT10, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-201ENST00000328834 USP26Q9BXU7 913 aa18.33■□□□□ 0.53
CNOT10-201ENST00000328834 PIK3R4Q99570 1358 aa18.33■□□□□ 0.52
CNOT10-201ENST00000328834 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
CNOT10-201ENST00000328834 CCDC61Q9Y6R9 512 aa18.33■□□□□ 0.52
CNOT10-201ENST00000328834 NEO1Q92859 1461 aa18.33■□□□□ 0.52
CNOT10-201ENST00000328834 TSPOAP1O95153 1857 aa18.33■□□□□ 0.52
CNOT10-201ENST00000328834 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
CNOT10-201ENST00000328834 CLTCQ00610 1675 aaKnown RBP18.32■□□□□ 0.52
CNOT10-201ENST00000328834 ESPNB1AK53 854 aa18.31■□□□□ 0.52
CNOT10-201ENST00000328834 ZNF428Q96B54 188 aa18.31■□□□□ 0.52
CNOT10-201ENST00000328834 ANKRD44Q8N8A2 993 aa18.31■□□□□ 0.52
CNOT10-201ENST00000328834 A2ML1A8K2U0 1454 aa18.31■□□□□ 0.52
CNOT10-201ENST00000328834 TRIM44Q96DX7 344 aaPredicted RBP18.31■□□□□ 0.52
CNOT10-201ENST00000328834 SLC26A8Q96RN1 970 aa18.3■□□□□ 0.52
CNOT10-201ENST00000328834 NSFL1CQ9UNZ2 370 aaKnown RBP18.3■□□□□ 0.52
CNOT10-201ENST00000328834 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
CNOT10-201ENST00000328834 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
CNOT10-201ENST00000328834 EDC4Q6P2E9 1401 aaKnown RBP18.3■□□□□ 0.52
CNOT10-201ENST00000328834 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.3■□□□□ 0.52
CNOT10-201ENST00000328834 RGS12O14924 1447 aa18.29■□□□□ 0.52
CNOT10-201ENST00000328834 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
CNOT10-201ENST00000328834 ACEP12821 1306 aa18.29■□□□□ 0.52
CNOT10-201ENST00000328834 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
CNOT10-201ENST00000328834 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
CNOT10-201ENST00000328834 CLCN1P35523 988 aa18.28■□□□□ 0.52
CNOT10-201ENST00000328834 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
CNOT10-201ENST00000328834 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
CNOT10-201ENST00000328834 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
CNOT10-201ENST00000328834 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
CNOT10-201ENST00000328834 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.52
CNOT10-201ENST00000328834 LARP6Q9BRS8 491 aaKnown RBP18.27■□□□□ 0.52
CNOT10-201ENST00000328834 ATP7BP35670 1465 aa18.27■□□□□ 0.52
CNOT10-201ENST00000328834 CDC42BPGQ6DT37 1551 aa18.27■□□□□ 0.52
CNOT10-201ENST00000328834 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
CNOT10-201ENST00000328834 CHL1O00533 1208 aa18.27■□□□□ 0.51
CNOT10-201ENST00000328834 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.51
CNOT10-201ENST00000328834 ZDHHC9Q9Y397 364 aa18.27■□□□□ 0.51
CNOT10-201ENST00000328834 MPNDQ8N594 471 aa18.26■□□□□ 0.51
CNOT10-201ENST00000328834 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
CNOT10-201ENST00000328834 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
CNOT10-201ENST00000328834 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
CNOT10-201ENST00000328834 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
CNOT10-201ENST00000328834 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
CNOT10-201ENST00000328834 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
CNOT10-201ENST00000328834 ROBO2Q9HCK4 1378 aa18.25■□□□□ 0.51
CNOT10-201ENST00000328834 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
CNOT10-201ENST00000328834 RABEP1Q15276 862 aa18.25■□□□□ 0.51
CNOT10-201ENST00000328834 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
CNOT10-201ENST00000328834 NEK4P51957 841 aa18.24■□□□□ 0.51
CNOT10-201ENST00000328834 CEBPAP49715 358 aaPredicted RBP18.23■□□□□ 0.51
CNOT10-201ENST00000328834 UNC5CLQ8IV45 518 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 GPT2Q8TD30 523 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
CNOT10-201ENST00000328834 GDPD2Q9HCC8 539 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 LMBRD1Q9NUN5 540 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 RBSNQ9H1K0 784 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 IL25Q9H293 177 aa18.23■□□□□ 0.51
CNOT10-201ENST00000328834 GOLGA6L22H0YM25 854 aa18.22■□□□□ 0.51
CNOT10-201ENST00000328834 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
CNOT10-201ENST00000328834 ESF1Q9H501 851 aaKnown RBP18.22■□□□□ 0.51
CNOT10-201ENST00000328834 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
CNOT10-201ENST00000328834 ZSCAN23Q3MJ62 389 aa18.22■□□□□ 0.51
CNOT10-201ENST00000328834 PDE1AP54750 535 aa18.22■□□□□ 0.51
CNOT10-201ENST00000328834 RBM33Q96EV2 1170 aaKnown RBP18.21■□□□□ 0.51
CNOT10-201ENST00000328834 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
CNOT10-201ENST00000328834 RPAP2Q8IXW5 612 aaPredicted RBP18.2■□□□□ 0.5
CNOT10-201ENST00000328834 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
CNOT10-201ENST00000328834 SKOR2Q2VWA4 1001 aaPredicted RBP18.2■□□□□ 0.5
CNOT10-201ENST00000328834 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
CNOT10-201ENST00000328834 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
CNOT10-201ENST00000328834 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
CNOT10-201ENST00000328834 SYCE3A1L190 88 aa18.19■□□□□ 0.5
CNOT10-201ENST00000328834 LTKP29376 864 aa18.19■□□□□ 0.5
CNOT10-201ENST00000328834 NUTM1Q86Y26 1132 aa18.19■□□□□ 0.5
CNOT10-201ENST00000328834 DLC1Q96QB1 1528 aa18.19■□□□□ 0.5
CNOT10-201ENST00000328834 ERC2O15083 957 aa18.18■□□□□ 0.5
CNOT10-201ENST00000328834 ANXA1P04083 346 aa18.18■□□□□ 0.5
CNOT10-201ENST00000328834 EYA1Q99502 592 aa18.18■□□□□ 0.5
CNOT10-201ENST00000328834 TMEM63CQ9P1W3 806 aa18.18■□□□□ 0.5
CNOT10-201ENST00000328834 ST18O60284 1047 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 LRRFIP2Q9Y608 721 aaKnown RBP18.17■□□□□ 0.5
CNOT10-201ENST00000328834 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
CNOT10-201ENST00000328834 AMPHP49418 695 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 ARID3AQ99856 593 aa18.17■□□□□ 0.5
CNOT10-201ENST00000328834 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
CNOT10-201ENST00000328834 PHAXQ9H814 394 aaKnown RBP18.16■□□□□ 0.5
CNOT10-201ENST00000328834 CRB1P82279 1406 aa18.16■□□□□ 0.5
CNOT10-201ENST00000328834 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
CNOT10-201ENST00000328834 PEAK1Q9H792 1746 aa18.14■□□□□ 0.5
CNOT10-201ENST00000328834 EIF2S2P20042 333 aaKnown RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms