RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TWISTNBQ3B726 338 aaPredicted RBP19.13■□□□□ 0.65
TPM3-205ENST00000328159 RTF1Q92541 710 aaKnown RBP19.13■□□□□ 0.65
TPM3-205ENST00000328159 RGPD2P0DJD1 1756 aa19.12■□□□□ 0.65
TPM3-205ENST00000328159 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
TPM3-205ENST00000328159 C8orf58Q8NAV2 365 aa19.12■□□□□ 0.65
TPM3-205ENST00000328159 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
TPM3-205ENST00000328159 MED1Q15648 1581 aaPredicted RBP19.11■□□□□ 0.65
TPM3-205ENST00000328159 ELL2O00472 640 aaPredicted RBP19.11■□□□□ 0.65
TPM3-205ENST00000328159 PLEKHG5O94827 1062 aa19.11■□□□□ 0.65
TPM3-205ENST00000328159 MRPL50Q8N5N7 158 aaKnown RBP19.11■□□□□ 0.65
TPM3-205ENST00000328159 NPHP3Q7Z494 1330 aa19.1■□□□□ 0.65
TPM3-205ENST00000328159 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
TPM3-205ENST00000328159 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
TPM3-205ENST00000328159 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
TPM3-205ENST00000328159 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
TPM3-205ENST00000328159 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
TPM3-205ENST00000328159 GNAT3A8MTJ3 354 aa19.09■□□□□ 0.65
TPM3-205ENST00000328159 ZNF335Q9H4Z2 1342 aaPredicted RBP19.08■□□□□ 0.65
TPM3-205ENST00000328159 PXDNQ92626 1479 aa19.08■□□□□ 0.65
TPM3-205ENST00000328159 MAP3K5Q99683 1374 aa19.08■□□□□ 0.64
TPM3-205ENST00000328159 IGHDP01880 384 aa19.07■□□□□ 0.64
TPM3-205ENST00000328159 TNS3Q68CZ2 1445 aa19.07■□□□□ 0.64
TPM3-205ENST00000328159 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 HAP1P54257 671 aaPredicted RBP19.06■□□□□ 0.64
TPM3-205ENST00000328159 ITPRIPQ8IWB1 547 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 TMEM57Q8N5G2 664 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 LRRC59Q96AG4 307 aaKnown RBP19.06■□□□□ 0.64
TPM3-205ENST00000328159 NCAPD2Q15021 1401 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
TPM3-205ENST00000328159 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
TPM3-205ENST00000328159 ANKRD24Q8TF21 1146 aa19.05■□□□□ 0.64
TPM3-205ENST00000328159 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
TPM3-205ENST00000328159 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
TPM3-205ENST00000328159 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
TPM3-205ENST00000328159 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
TPM3-205ENST00000328159 CRYBG1Q9Y4K1 1723 aa19.03■□□□□ 0.64
TPM3-205ENST00000328159 SPATA31A3Q5VYP0 1347 aa19.03■□□□□ 0.64
TPM3-205ENST00000328159 ZC3H6P61129 1189 aaKnown RBP19.03■□□□□ 0.64
TPM3-205ENST00000328159 MIS18AQ9NYP9 233 aa19.03■□□□□ 0.64
TPM3-205ENST00000328159 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
TPM3-205ENST00000328159 IL17REQ8NFR9 667 aa19.02■□□□□ 0.64
TPM3-205ENST00000328159 COL18A1P39060 1754 aa19.01■□□□□ 0.63
TPM3-205ENST00000328159 LMO7Q8WWI1 1683 aa19.01■□□□□ 0.63
TPM3-205ENST00000328159 API5Q9BZZ5 524 aaKnown RBP19■□□□□ 0.63
TPM3-205ENST00000328159 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
TPM3-205ENST00000328159 SLAIN2Q9P270 581 aa19■□□□□ 0.63
TPM3-205ENST00000328159 PLEKHO1Q53GL0 409 aaPredicted RBP18.99■□□□□ 0.63
TPM3-205ENST00000328159 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
TPM3-205ENST00000328159 ABCC4O15439 1325 aa18.99■□□□□ 0.63
TPM3-205ENST00000328159 CABLES1Q8TDN4 633 aa18.98■□□□□ 0.63
TPM3-205ENST00000328159 ERBB3P21860 1342 aa18.98■□□□□ 0.63
TPM3-205ENST00000328159 TAF7Q15545 349 aaPredicted RBP18.98■□□□□ 0.63
TPM3-205ENST00000328159 AMOTQ4VCS5 1084 aa18.98■□□□□ 0.63
TPM3-205ENST00000328159 ZBTB40Q9NUA8 1239 aa18.98■□□□□ 0.63
TPM3-205ENST00000328159 ABCC6O95255 1503 aa18.98■□□□□ 0.63
TPM3-205ENST00000328159 PDE4AP27815 886 aa18.97■□□□□ 0.63
TPM3-205ENST00000328159 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
TPM3-205ENST00000328159 AKAP4Q5JQC9 854 aa18.96■□□□□ 0.63
TPM3-205ENST00000328159 ZNF530Q6P9A1 599 aaPredicted RBP18.96■□□□□ 0.63
TPM3-205ENST00000328159 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
TPM3-205ENST00000328159 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
TPM3-205ENST00000328159 FAM208AQ9UK61 1670 aaKnown RBP18.95■□□□□ 0.62
TPM3-205ENST00000328159 BACH2Q9BYV9 841 aa18.95■□□□□ 0.62
TPM3-205ENST00000328159 VIRMAQ69YN4 1812 aaKnown RBP18.94■□□□□ 0.62
TPM3-205ENST00000328159 CPDO75976 1380 aa18.94■□□□□ 0.62
TPM3-205ENST00000328159 RGS3P49796 1198 aa18.94■□□□□ 0.62
TPM3-205ENST00000328159 HDAC1Q13547 482 aaPredicted RBP18.93■□□□□ 0.62
TPM3-205ENST00000328159 SOS1Q07889 1333 aaPredicted RBP18.93■□□□□ 0.62
TPM3-205ENST00000328159 ZBTB7BO15156 539 aaPredicted RBP18.93■□□□□ 0.62
TPM3-205ENST00000328159 LGR6Q9HBX8 967 aa18.93■□□□□ 0.62
TPM3-205ENST00000328159 PTPRCP08575 1304 aa18.93■□□□□ 0.62
TPM3-205ENST00000328159 RGS12O14924 1447 aa18.92■□□□□ 0.62
TPM3-205ENST00000328159 KDM3BQ7LBC6 1761 aa18.92■□□□□ 0.62
TPM3-205ENST00000328159 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
TPM3-205ENST00000328159 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
TPM3-205ENST00000328159 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
TPM3-205ENST00000328159 CHRNA2Q15822 529 aa18.91■□□□□ 0.62
TPM3-205ENST00000328159 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
TPM3-205ENST00000328159 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
TPM3-205ENST00000328159 PDZRN3Q9UPQ7 1066 aa18.91■□□□□ 0.62
TPM3-205ENST00000328159 CACNA1FO60840 1977 aa18.9■□□□□ 0.62
TPM3-205ENST00000328159 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
TPM3-205ENST00000328159 RNMTO43148 476 aaKnown RBP18.89■□□□□ 0.61
TPM3-205ENST00000328159 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
TPM3-205ENST00000328159 INTS3Q68E01 1043 aaKnown RBP18.89■□□□□ 0.61
TPM3-205ENST00000328159 ABCA3Q99758 1704 aa18.89■□□□□ 0.61
TPM3-205ENST00000328159 TEFQ10587 303 aa18.88■□□□□ 0.61
TPM3-205ENST00000328159 CCDC30Q5VVM6 783 aa18.88■□□□□ 0.61
TPM3-205ENST00000328159 RAPGEF4Q8WZA2 1011 aa18.88■□□□□ 0.61
TPM3-205ENST00000328159 STK31Q9BXU1 1019 aa18.88■□□□□ 0.61
TPM3-205ENST00000328159 ADAMTS7Q9UKP4 1686 aa18.87■□□□□ 0.61
TPM3-205ENST00000328159 TATP17735 454 aaPredicted RBP18.86■□□□□ 0.61
TPM3-205ENST00000328159 FAM161AQ3B820 660 aa18.86■□□□□ 0.61
TPM3-205ENST00000328159 G2E3Q7L622 706 aa18.86■□□□□ 0.61
TPM3-205ENST00000328159 SIPA1L3O60292 1781 aaPredicted RBP18.86■□□□□ 0.61
TPM3-205ENST00000328159 SMC5Q8IY18 1101 aa18.86■□□□□ 0.61
TPM3-205ENST00000328159 MEGF6O75095 1541 aa18.85■□□□□ 0.61
TPM3-205ENST00000328159 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms