RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 EID1Q9Y6B2 187 aa23.39■■□□□ 1.33
SPSB1-201ENST00000328089 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
SPSB1-201ENST00000328089 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
SPSB1-201ENST00000328089 MAP4K4O95819 1239 aaPredicted RBP23.38■■□□□ 1.33
SPSB1-201ENST00000328089 SDSP20132 328 aa23.38■■□□□ 1.33
SPSB1-201ENST00000328089 CPSF1Q10570 1443 aaKnown RBP23.38■■□□□ 1.33
SPSB1-201ENST00000328089 TNRQ92752 1358 aa23.38■■□□□ 1.33
SPSB1-201ENST00000328089 ANXA1P04083 346 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 RBM25P49756 843 aaKnown RBP23.37■■□□□ 1.33
SPSB1-201ENST00000328089 CHL1O00533 1208 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 PKP1Q13835 747 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 TRIM6-TRIM34B2RNG4 842 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 ABTB2Q8N961 1025 aa23.36■■□□□ 1.33
SPSB1-201ENST00000328089 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
SPSB1-201ENST00000328089 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
SPSB1-201ENST00000328089 IL1RAPL2Q9NP60 686 aa23.35■■□□□ 1.33
SPSB1-201ENST00000328089 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
SPSB1-201ENST00000328089 ATP7BP35670 1465 aa23.34■■□□□ 1.33
SPSB1-201ENST00000328089 TTC22Q5TAA0 569 aa23.33■■□□□ 1.33
SPSB1-201ENST00000328089 RRAGDQ9NQL2 400 aaPredicted RBP23.33■■□□□ 1.33
SPSB1-201ENST00000328089 MED14O60244 1454 aa23.33■■□□□ 1.32
SPSB1-201ENST00000328089 ANKRD44Q8N8A2 993 aa23.33■■□□□ 1.32
SPSB1-201ENST00000328089 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
SPSB1-201ENST00000328089 ZGPATQ8N5A5 531 aaKnown RBP23.32■■□□□ 1.32
SPSB1-201ENST00000328089 TMEM2Q9UHN6 1383 aa23.31■■□□□ 1.32
SPSB1-201ENST00000328089 MCTP1Q6DN14 999 aa23.31■■□□□ 1.32
SPSB1-201ENST00000328089 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
SPSB1-201ENST00000328089 PNMA6EA0A0J9YXQ4 647 aa23.29■■□□□ 1.32
SPSB1-201ENST00000328089 LARP6Q9BRS8 491 aaKnown RBP23.29■■□□□ 1.32
SPSB1-201ENST00000328089 KCNA6P17658 529 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
SPSB1-201ENST00000328089 GAS2L3Q86XJ1 694 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 GBP4Q96PP9 640 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
SPSB1-201ENST00000328089 DDX49Q9Y6V7 483 aaKnown RBP23.28■■□□□ 1.32
SPSB1-201ENST00000328089 PTCH1Q13635 1447 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
SPSB1-201ENST00000328089 TRHP20396 242 aaPredicted RBP23.27■■□□□ 1.32
SPSB1-201ENST00000328089 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
SPSB1-201ENST00000328089 NUTM1Q86Y26 1132 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 ANO2Q9NQ90 1003 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
SPSB1-201ENST00000328089 AATKQ6ZMQ8 1374 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
SPSB1-201ENST00000328089 FLIIQ13045 1269 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 CASC1Q6TDU7 716 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
SPSB1-201ENST00000328089 UPF3BQ9BZI7 483 aaKnown RBP23.25■■□□□ 1.31
SPSB1-201ENST00000328089 NEK4P51957 841 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 USP26Q9BXU7 913 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 SNX21Q969T3 373 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 HMMRO75330 724 aa23.23■■□□□ 1.31
SPSB1-201ENST00000328089 GNAI2P04899 355 aa23.23■■□□□ 1.31
SPSB1-201ENST00000328089 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
SPSB1-201ENST00000328089 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
SPSB1-201ENST00000328089 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 KCNQ3O43525 872 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 KIF20BQ96Q89 1820 aa23.21■■□□□ 1.31
SPSB1-201ENST00000328089 PDE1AP54750 535 aa23.21■■□□□ 1.31
SPSB1-201ENST00000328089 CAVIN1Q6NZI2 390 aaKnown RBP23.21■■□□□ 1.31
SPSB1-201ENST00000328089 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
SPSB1-201ENST00000328089 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
SPSB1-201ENST00000328089 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
SPSB1-201ENST00000328089 USP6P35125 1406 aa23.2■■□□□ 1.3
SPSB1-201ENST00000328089 HAP1P54257 671 aaPredicted RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 UNC5CLQ8IV45 518 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 ESCO1Q5FWF5 840 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 GOLGA6L22H0YM25 854 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 NAP1L5Q96NT1 182 aaPredicted RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
SPSB1-201ENST00000328089 RBM27Q9P2N5 1060 aaKnown RBP23.18■■□□□ 1.3
SPSB1-201ENST00000328089 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
SPSB1-201ENST00000328089 BAG4O95429 457 aaKnown RBP23.17■■□□□ 1.3
SPSB1-201ENST00000328089 HOXC9P31274 260 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 ADAMTS13Q76LX8 1427 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 PTPRCP08575 1304 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 RABEP1Q15276 862 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 PALD1Q9ULE6 856 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
SPSB1-201ENST00000328089 ATP10DQ9P241 1426 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 ST18O60284 1047 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 FAM43AQ8N2R8 423 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 TRIM44Q96DX7 344 aaPredicted RBP23.16■■□□□ 1.3
SPSB1-201ENST00000328089 DIP2BQ9P265 1576 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 UBTFL1P0CB47 393 aaPredicted RBP23.15■■□□□ 1.3
SPSB1-201ENST00000328089 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
SPSB1-201ENST00000328089 ERC2O15083 957 aa23.15■■□□□ 1.3
SPSB1-201ENST00000328089 CCT4P50991 539 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms