RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 EID1Q9Y6B2 187 aa23.39■■□□□ 1.33
SPSB1-201ENST00000328089 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
SPSB1-201ENST00000328089 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
SPSB1-201ENST00000328089 MAP4K4O95819 1239 aaPredicted RBP23.38■■□□□ 1.33
SPSB1-201ENST00000328089 SDSP20132 328 aa23.38■■□□□ 1.33
SPSB1-201ENST00000328089 CPSF1Q10570 1443 aaKnown RBP23.38■■□□□ 1.33
SPSB1-201ENST00000328089 TNRQ92752 1358 aa23.38■■□□□ 1.33
SPSB1-201ENST00000328089 ANXA1P04083 346 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 RBM25P49756 843 aaKnown RBP23.37■■□□□ 1.33
SPSB1-201ENST00000328089 CHL1O00533 1208 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 PKP1Q13835 747 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 TRIM6-TRIM34B2RNG4 842 aa23.37■■□□□ 1.33
SPSB1-201ENST00000328089 ABTB2Q8N961 1025 aa23.36■■□□□ 1.33
SPSB1-201ENST00000328089 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
SPSB1-201ENST00000328089 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
SPSB1-201ENST00000328089 IL1RAPL2Q9NP60 686 aa23.35■■□□□ 1.33
SPSB1-201ENST00000328089 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
SPSB1-201ENST00000328089 ATP7BP35670 1465 aa23.34■■□□□ 1.33
SPSB1-201ENST00000328089 TTC22Q5TAA0 569 aa23.33■■□□□ 1.33
SPSB1-201ENST00000328089 RRAGDQ9NQL2 400 aaPredicted RBP23.33■■□□□ 1.33
SPSB1-201ENST00000328089 MED14O60244 1454 aa23.33■■□□□ 1.32
SPSB1-201ENST00000328089 ANKRD44Q8N8A2 993 aa23.33■■□□□ 1.32
SPSB1-201ENST00000328089 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
SPSB1-201ENST00000328089 ZGPATQ8N5A5 531 aaKnown RBP23.32■■□□□ 1.32
SPSB1-201ENST00000328089 TMEM2Q9UHN6 1383 aa23.31■■□□□ 1.32
SPSB1-201ENST00000328089 MCTP1Q6DN14 999 aa23.31■■□□□ 1.32
SPSB1-201ENST00000328089 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
SPSB1-201ENST00000328089 PNMA6EA0A0J9YXQ4 647 aa23.29■■□□□ 1.32
SPSB1-201ENST00000328089 LARP6Q9BRS8 491 aaKnown RBP23.29■■□□□ 1.32
SPSB1-201ENST00000328089 KCNA6P17658 529 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
SPSB1-201ENST00000328089 GAS2L3Q86XJ1 694 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 GBP4Q96PP9 640 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
SPSB1-201ENST00000328089 DDX49Q9Y6V7 483 aaKnown RBP23.28■■□□□ 1.32
SPSB1-201ENST00000328089 PTCH1Q13635 1447 aa23.28■■□□□ 1.32
SPSB1-201ENST00000328089 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
SPSB1-201ENST00000328089 TRHP20396 242 aaPredicted RBP23.27■■□□□ 1.32
SPSB1-201ENST00000328089 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
SPSB1-201ENST00000328089 NUTM1Q86Y26 1132 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 ANO2Q9NQ90 1003 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
SPSB1-201ENST00000328089 AATKQ6ZMQ8 1374 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
SPSB1-201ENST00000328089 FLIIQ13045 1269 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 CASC1Q6TDU7 716 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
SPSB1-201ENST00000328089 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
SPSB1-201ENST00000328089 UPF3BQ9BZI7 483 aaKnown RBP23.25■■□□□ 1.31
SPSB1-201ENST00000328089 NEK4P51957 841 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 USP26Q9BXU7 913 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 SNX21Q969T3 373 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 GRPEL1Q9HAV7 217 aa23.24■■□□□ 1.31
SPSB1-201ENST00000328089 HMMRO75330 724 aa23.23■■□□□ 1.31
SPSB1-201ENST00000328089 GNAI2P04899 355 aa23.23■■□□□ 1.31
SPSB1-201ENST00000328089 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
SPSB1-201ENST00000328089 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
SPSB1-201ENST00000328089 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 KCNQ3O43525 872 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 HDGFL1Q5TGJ6 251 aa23.22■■□□□ 1.31
SPSB1-201ENST00000328089 KIF20BQ96Q89 1820 aa23.21■■□□□ 1.31
SPSB1-201ENST00000328089 PDE1AP54750 535 aa23.21■■□□□ 1.31
SPSB1-201ENST00000328089 CAVIN1Q6NZI2 390 aaKnown RBP23.21■■□□□ 1.31
SPSB1-201ENST00000328089 VIRMAQ69YN4 1812 aaKnown RBP23.21■■□□□ 1.31
SPSB1-201ENST00000328089 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
SPSB1-201ENST00000328089 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
SPSB1-201ENST00000328089 USP6P35125 1406 aa23.2■■□□□ 1.3
SPSB1-201ENST00000328089 HAP1P54257 671 aaPredicted RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 UNC5CLQ8IV45 518 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 PRPF40AO75400 957 aaKnown RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 ESCO1Q5FWF5 840 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 MPRIPQ6WCQ1 1025 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 GOLGA6L22H0YM25 854 aa23.19■■□□□ 1.3
SPSB1-201ENST00000328089 NAP1L5Q96NT1 182 aaPredicted RBP23.19■■□□□ 1.3
SPSB1-201ENST00000328089 SURF6O75683 361 aaKnown RBP23.18■■□□□ 1.3
SPSB1-201ENST00000328089 RBM27Q9P2N5 1060 aaKnown RBP23.18■■□□□ 1.3
SPSB1-201ENST00000328089 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
SPSB1-201ENST00000328089 BAG4O95429 457 aaKnown RBP23.17■■□□□ 1.3
SPSB1-201ENST00000328089 HOXC9P31274 260 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 ADAMTS13Q76LX8 1427 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 PTPRCP08575 1304 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 RABEP1Q15276 862 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 PALD1Q9ULE6 856 aa23.17■■□□□ 1.3
SPSB1-201ENST00000328089 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
SPSB1-201ENST00000328089 ATP10DQ9P241 1426 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 ST18O60284 1047 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 FAM43AQ8N2R8 423 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 TRIM44Q96DX7 344 aaPredicted RBP23.16■■□□□ 1.3
SPSB1-201ENST00000328089 DIP2BQ9P265 1576 aa23.16■■□□□ 1.3
SPSB1-201ENST00000328089 UBTFL1P0CB47 393 aaPredicted RBP23.15■■□□□ 1.3
SPSB1-201ENST00000328089 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
SPSB1-201ENST00000328089 ERC2O15083 957 aa23.15■■□□□ 1.3
SPSB1-201ENST00000328089 CCT4P50991 539 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms