RNA–Protein interactions for RNA: ENST00000327470.4

FANCF-201, Transcript of FA complementation group F, humanhuman

APPRIS P1 BASIC

Gene FANCF, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCF-201ENST00000327470 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
FANCF-201ENST00000327470 PDE4CQ08493 712 aa12.91□□□□□ -0.34
FANCF-201ENST00000327470 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
FANCF-201ENST00000327470 CWC27Q6UX04 472 aaKnown RBP12.91□□□□□ -0.34
FANCF-201ENST00000327470 INSRP06213 1382 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 LARP1BQ659C4 914 aaKnown RBP12.9□□□□□ -0.34
FANCF-201ENST00000327470 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
FANCF-201ENST00000327470 ZMYM4Q5VZL5 1548 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 KRT85P78386 507 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 FANCAO15360 1455 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 KDM5BQ9UGL1 1544 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 TRDNQ13061 729 aa12.9□□□□□ -0.34
FANCF-201ENST00000327470 EIF2AK4Q9P2K8 1649 aaKnown RBP12.89□□□□□ -0.35
FANCF-201ENST00000327470 FAM83GA6ND36 823 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 NPC1L1Q9UHC9 1359 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
FANCF-201ENST00000327470 GCC2Q8IWJ2 1684 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
FANCF-201ENST00000327470 RASSF8Q8NHQ8 419 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 SNX21Q969T3 373 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 TRIM29Q14134 588 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 NOM1Q5C9Z4 860 aaKnown RBP12.89□□□□□ -0.35
FANCF-201ENST00000327470 CD109Q6YHK3 1445 aa12.89□□□□□ -0.35
FANCF-201ENST00000327470 TTC22Q5TAA0 569 aa12.88□□□□□ -0.35
FANCF-201ENST00000327470 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
FANCF-201ENST00000327470 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
FANCF-201ENST00000327470 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
FANCF-201ENST00000327470 CCDC112Q8NEF3 446 aa12.88□□□□□ -0.35
FANCF-201ENST00000327470 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
FANCF-201ENST00000327470 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
FANCF-201ENST00000327470 KINO60870 393 aaKnown RBP12.88□□□□□ -0.35
FANCF-201ENST00000327470 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
FANCF-201ENST00000327470 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
FANCF-201ENST00000327470 KDM6BO15054 1643 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 STK3Q13188 491 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 PDRG1Q9NUG6 133 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 ANKRD1Q15327 319 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
FANCF-201ENST00000327470 SIL1Q9H173 461 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 TNMDQ9H2S6 317 aa12.87□□□□□ -0.35
FANCF-201ENST00000327470 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
FANCF-201ENST00000327470 WASHC4Q2M389 1173 aa12.86□□□□□ -0.35
FANCF-201ENST00000327470 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
FANCF-201ENST00000327470 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
FANCF-201ENST00000327470 CWC15Q9P013 229 aaKnown RBP12.86□□□□□ -0.35
FANCF-201ENST00000327470 PTPRCP08575 1304 aa12.86□□□□□ -0.35
FANCF-201ENST00000327470 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
FANCF-201ENST00000327470 AACSQ86V21 672 aa12.85□□□□□ -0.35
FANCF-201ENST00000327470 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
FANCF-201ENST00000327470 SDSP20132 328 aa12.85□□□□□ -0.35
FANCF-201ENST00000327470 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
FANCF-201ENST00000327470 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
FANCF-201ENST00000327470 PES1O00541 588 aaKnown RBP12.85□□□□□ -0.35
FANCF-201ENST00000327470 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
FANCF-201ENST00000327470 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
FANCF-201ENST00000327470 CEP170Q5SW79 1584 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 GLRX3O76003 335 aaKnown RBP12.84□□□□□ -0.35
FANCF-201ENST00000327470 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
FANCF-201ENST00000327470 VAMP4O75379 141 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 FERMT3Q86UX7 667 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 NFXL1Q6ZNB6 911 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 MEIS3Q99687 375 aa12.84□□□□□ -0.35
FANCF-201ENST00000327470 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 TPM1P09493 284 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 TSHZ3Q63HK5 1081 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 ANKRD44Q8N8A2 993 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 NUP62CLQ9H1M0 184 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
FANCF-201ENST00000327470 FLIIQ13045 1269 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 SPATA32Q96LK8 384 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 ESCO1Q5FWF5 840 aa12.83□□□□□ -0.36
FANCF-201ENST00000327470 HOOK1Q9UJC3 728 aaKnown RBP12.83□□□□□ -0.36
FANCF-201ENST00000327470 SKIDA1Q1XH10 827 aa12.82□□□□□ -0.36
FANCF-201ENST00000327470 ZSCAN23Q3MJ62 389 aa12.82□□□□□ -0.36
FANCF-201ENST00000327470 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
FANCF-201ENST00000327470 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
FANCF-201ENST00000327470 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
FANCF-201ENST00000327470 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms