RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CCDC69A6NI79 296 aa19.29■□□□□ 0.68
SMAD3-201ENST00000327367 CCDC183Q5T5S1 534 aa19.29■□□□□ 0.68
SMAD3-201ENST00000327367 TBC1D2BQ9UPU7 963 aa19.29■□□□□ 0.68
SMAD3-201ENST00000327367 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
SMAD3-201ENST00000327367 MAP9Q49MG5 647 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 ANKRD1Q15327 319 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 MICALCLQ6ZW33 695 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 CABP2Q9NPB3 220 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 HIP1O00291 1037 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 ZSCAN12O43309 604 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 RSPH14Q9UHP6 348 aa19.28■□□□□ 0.68
SMAD3-201ENST00000327367 ATP2B2Q01814 1243 aa19.27■□□□□ 0.68
SMAD3-201ENST00000327367 GNAI3P08754 354 aa19.27■□□□□ 0.68
SMAD3-201ENST00000327367 DYNC1I1O14576 645 aa19.27■□□□□ 0.67
SMAD3-201ENST00000327367 PDE3AQ14432 1141 aa19.27■□□□□ 0.67
SMAD3-201ENST00000327367 TXLNBQ8N3L3 684 aa19.27■□□□□ 0.67
SMAD3-201ENST00000327367 PPP2R1AP30153 589 aa19.26■□□□□ 0.67
SMAD3-201ENST00000327367 BLOC1S2Q6QNY1 142 aa19.26■□□□□ 0.67
SMAD3-201ENST00000327367 CCDC91Q7Z6B0 441 aa19.26■□□□□ 0.67
SMAD3-201ENST00000327367 LUZP1Q86V48 1076 aa19.26■□□□□ 0.67
SMAD3-201ENST00000327367 TOP1P11387 765 aaKnown RBP19.26■□□□□ 0.67
SMAD3-201ENST00000327367 CEP135Q66GS9 1140 aa19.25■□□□□ 0.67
SMAD3-201ENST00000327367 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
SMAD3-201ENST00000327367 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
SMAD3-201ENST00000327367 KIF2AO00139 706 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-201ENST00000327367 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
SMAD3-201ENST00000327367 MVPQ14764 893 aaKnown RBP19.24■□□□□ 0.67
SMAD3-201ENST00000327367 TMC6Q7Z403 805 aa19.24■□□□□ 0.67
SMAD3-201ENST00000327367 TRIM22Q8IYM9 498 aa19.24■□□□□ 0.67
SMAD3-201ENST00000327367 RNF216Q9NWF9 866 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-201ENST00000327367 SPA17Q15506 151 aa19.24■□□□□ 0.67
SMAD3-201ENST00000327367 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.24■□□□□ 0.674e-8■□□□□ 10.4
SMAD3-201ENST00000327367 V9GYY5 206 aaPredicted RBP19.24■□□□□ 0.67
SMAD3-201ENST00000327367 MATR3P43243 847 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■■□□ 17.3
SMAD3-201ENST00000327367 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
SMAD3-201ENST00000327367 CCDC30Q5VVM6 783 aa19.23■□□□□ 0.67
SMAD3-201ENST00000327367 MAATS1Q7Z4T9 603 aa19.23■□□□□ 0.67
SMAD3-201ENST00000327367 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
SMAD3-201ENST00000327367 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
SMAD3-201ENST00000327367 SMARCA5O60264 1052 aaPredicted RBP19.22■□□□□ 0.67
SMAD3-201ENST00000327367 CCDC175P0C221 793 aa19.22■□□□□ 0.67
SMAD3-201ENST00000327367 PRKAR2BP31323 418 aa19.22■□□□□ 0.67
SMAD3-201ENST00000327367 ISM2Q6H9L7 571 aa19.22■□□□□ 0.67
SMAD3-201ENST00000327367 PANK2Q9BZ23 570 aa19.22■□□□□ 0.67
SMAD3-201ENST00000327367 NUTM1Q86Y26 1132 aa19.22■□□□□ 0.67
SMAD3-201ENST00000327367 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
SMAD3-201ENST00000327367 ZNF397Q8NF99 534 aaPredicted RBP19.22■□□□□ 0.67
SMAD3-201ENST00000327367 BMS1Q14692 1282 aaKnown RBP19.21■□□□□ 0.67
SMAD3-201ENST00000327367 MICALL1Q8N3F8 863 aa19.21■□□□□ 0.67
SMAD3-201ENST00000327367 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
SMAD3-201ENST00000327367 HLTFQ14527 1009 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMAD3-201ENST00000327367 BIN1O00499 593 aa19.21■□□□□ 0.67
SMAD3-201ENST00000327367 ERCC6Q03468 1493 aa19.21■□□□□ 0.67
SMAD3-201ENST00000327367 SPECC1Q5M775 1068 aa19.21■□□□□ 0.67
SMAD3-201ENST00000327367 KRT222Q8N1A0 295 aa19.2■□□□□ 0.66
SMAD3-201ENST00000327367 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
SMAD3-201ENST00000327367 AACSQ86V21 672 aa19.2■□□□□ 0.66
SMAD3-201ENST00000327367 PUS7Q96PZ0 661 aaKnown RBP19.2■□□□□ 0.66
SMAD3-201ENST00000327367 SMG6Q86US8 1419 aaKnown RBP19.2■□□□□ 0.66
SMAD3-201ENST00000327367 GSTTP1A0A1W2PQM5 241 aa19.2■□□□□ 0.66
SMAD3-201ENST00000327367 VGLL3A8MV65 326 aa19.19■□□□□ 0.66
SMAD3-201ENST00000327367 FKBP4Q02790 459 aaKnown RBP eCLIP19.19■□□□□ 0.66
SMAD3-201ENST00000327367 CTNNBL1Q8WYA6 563 aaPredicted RBP19.19■□□□□ 0.66
SMAD3-201ENST00000327367 ANO10Q9NW15 660 aa19.19■□□□□ 0.66
SMAD3-201ENST00000327367 SMC1AQ14683 1233 aaKnown RBP19.19■□□□□ 0.66
SMAD3-201ENST00000327367 C20orf194Q5TEA3 1177 aa19.19■□□□□ 0.66
SMAD3-201ENST00000327367 NOL7Q9UMY1 257 aaKnown RBP19.19■□□□□ 0.66
SMAD3-201ENST00000327367 CCDC158Q5M9N0 1113 aa19.18■□□□□ 0.66
SMAD3-201ENST00000327367 ZSCAN31Q96LW9 406 aaPredicted RBP19.18■□□□□ 0.66
SMAD3-201ENST00000327367 TMCO5BA8MYB1 307 aa19.18■□□□□ 0.66
SMAD3-201ENST00000327367 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.17■□□□□ 0.661e-6■□□□□ 9.2
SMAD3-201ENST00000327367 MCM3P25205 808 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 IMMTQ16891 758 aaKnown RBP19.17■□□□□ 0.66
SMAD3-201ENST00000327367 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 CLGNO14967 610 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 CEP57Q86XR8 500 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 C10orf67Q8IYJ2 551 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 ATF7IPQ6VMQ6 1270 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 CNNM1Q9NRU3 951 aa19.17■□□□□ 0.66
SMAD3-201ENST00000327367 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
SMAD3-201ENST00000327367 CCDC160A6NGH7 325 aa19.16■□□□□ 0.66
SMAD3-201ENST00000327367 VGFO15240 615 aaPredicted RBP19.16■□□□□ 0.66
SMAD3-201ENST00000327367 SLC3A2P08195 630 aaKnown RBP19.16■□□□□ 0.66
SMAD3-201ENST00000327367 PSME1Q06323 249 aa19.15■□□□□ 0.66
SMAD3-201ENST00000327367 PRPF40BQ6NWY9 871 aaKnown RBP19.15■□□□□ 0.66
SMAD3-201ENST00000327367 GCOM1H8Y6P7 765 aaPredicted RBP19.15■□□□□ 0.66
SMAD3-201ENST00000327367 MYZAPP0CAP1 466 aa19.15■□□□□ 0.66
SMAD3-201ENST00000327367 MACROD2A1Z1Q3 448 aa19.15■□□□□ 0.66
SMAD3-201ENST00000327367 MCM6Q14566 821 aa19.15■□□□□ 0.66
SMAD3-201ENST00000327367 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
SMAD3-201ENST00000327367 CCDC12Q8WUD4 166 aaPredicted RBP19.15■□□□□ 0.66
SMAD3-201ENST00000327367 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
SMAD3-201ENST00000327367 CACNA2D4Q7Z3S7 1137 aa19.14■□□□□ 0.66
SMAD3-201ENST00000327367 CCDC97Q96F63 343 aaPredicted RBP19.14■□□□□ 0.65
SMAD3-201ENST00000327367 TFIP11Q9UBB9 837 aaKnown RBP19.14■□□□□ 0.65
SMAD3-201ENST00000327367 TTC31Q49AM3 519 aaPredicted RBP19.13■□□□□ 0.65
SMAD3-201ENST00000327367 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
SMAD3-201ENST00000327367 CARMIL2Q6F5E8 1435 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms