RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.58■□□□□ 0.89
SSH1-201ENST00000326470 RIMS2Q9UQ26 1411 aa20.58■□□□□ 0.89
SSH1-201ENST00000326470 ST18O60284 1047 aa20.58■□□□□ 0.88
SSH1-201ENST00000326470 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
SSH1-201ENST00000326470 CASC1Q6TDU7 716 aa20.57■□□□□ 0.88
SSH1-201ENST00000326470 RPAP2Q8IXW5 612 aaPredicted RBP20.57■□□□□ 0.88
SSH1-201ENST00000326470 PDLIM2Q96JY6 352 aa20.57■□□□□ 0.88
SSH1-201ENST00000326470 RBSNQ9H1K0 784 aa20.57■□□□□ 0.88
SSH1-201ENST00000326470 CDK12Q9NYV4 1490 aaPredicted RBP20.57■□□□□ 0.88
SSH1-201ENST00000326470 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
SSH1-201ENST00000326470 SDSP20132 328 aa20.57■□□□□ 0.88
SSH1-201ENST00000326470 PDCL3Q9H2J4 239 aa20.57■□□□□ 0.88
SSH1-201ENST00000326470 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
SSH1-201ENST00000326470 NOL7Q9UMY1 257 aaKnown RBP20.56■□□□□ 0.88
SSH1-201ENST00000326470 ZGPATQ8N5A5 531 aaKnown RBP20.55■□□□□ 0.88
SSH1-201ENST00000326470 ZMYND15Q9H091 742 aa20.55■□□□□ 0.88
SSH1-201ENST00000326470 PREX1Q8TCU6 1659 aa20.55■□□□□ 0.88
SSH1-201ENST00000326470 CPSF1Q10570 1443 aaKnown RBP20.54■□□□□ 0.88
SSH1-201ENST00000326470 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
SSH1-201ENST00000326470 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
SSH1-201ENST00000326470 CEP85Q6P2H3 762 aa20.54■□□□□ 0.88
SSH1-201ENST00000326470 ZDHHC9Q9Y397 364 aa20.54■□□□□ 0.88
SSH1-201ENST00000326470 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
SSH1-201ENST00000326470 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
SSH1-201ENST00000326470 REC8O95072 547 aa20.54■□□□□ 0.88
SSH1-201ENST00000326470 GPT2Q8TD30 523 aa20.54■□□□□ 0.88
SSH1-201ENST00000326470 ZNF500O60304 480 aaPredicted RBP20.53■□□□□ 0.88
SSH1-201ENST00000326470 PKNOX2Q96KN3 472 aa20.53■□□□□ 0.88
SSH1-201ENST00000326470 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
SSH1-201ENST00000326470 RGS12O14924 1447 aa20.52■□□□□ 0.88
SSH1-201ENST00000326470 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.88
SSH1-201ENST00000326470 HAP1P54257 671 aaPredicted RBP20.52■□□□□ 0.87
SSH1-201ENST00000326470 DLC1Q96QB1 1528 aa20.51■□□□□ 0.87
SSH1-201ENST00000326470 DCTN1Q14203 1278 aa20.51■□□□□ 0.87
SSH1-201ENST00000326470 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.51■□□□□ 0.87
SSH1-201ENST00000326470 RTL1A6NKG5 1358 aa20.5■□□□□ 0.87
SSH1-201ENST00000326470 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
SSH1-201ENST00000326470 NME9Q86XW9 330 aa20.5■□□□□ 0.87
SSH1-201ENST00000326470 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
SSH1-201ENST00000326470 ERC2O15083 957 aa20.49■□□□□ 0.87
SSH1-201ENST00000326470 LRSAM1Q6UWE0 723 aa20.49■□□□□ 0.87
SSH1-201ENST00000326470 WAPLQ7Z5K2 1190 aa20.49■□□□□ 0.87
SSH1-201ENST00000326470 TMEM63CQ9P1W3 806 aa20.48■□□□□ 0.87
SSH1-201ENST00000326470 MSH6P52701 1360 aa20.48■□□□□ 0.87
SSH1-201ENST00000326470 PTPRCP08575 1304 aa20.47■□□□□ 0.87
SSH1-201ENST00000326470 MCM5P33992 734 aa20.47■□□□□ 0.87
SSH1-201ENST00000326470 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
SSH1-201ENST00000326470 ZKSCAN5Q9Y2L8 839 aa20.47■□□□□ 0.87
SSH1-201ENST00000326470 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
SSH1-201ENST00000326470 APBB1O00213 710 aa20.46■□□□□ 0.87
SSH1-201ENST00000326470 MEIS3Q99687 375 aa20.46■□□□□ 0.87
SSH1-201ENST00000326470 R3HCC1Q9Y3T6 440 aaKnown RBP20.46■□□□□ 0.87
SSH1-201ENST00000326470 COG3Q96JB2 828 aa20.45■□□□□ 0.86
SSH1-201ENST00000326470 SYCE3A1L190 88 aa20.45■□□□□ 0.86
SSH1-201ENST00000326470 CHL1O00533 1208 aa20.45■□□□□ 0.86
SSH1-201ENST00000326470 MBD3O95983 291 aa20.45■□□□□ 0.86
SSH1-201ENST00000326470 RRS1Q15050 365 aaKnown RBP20.45■□□□□ 0.86
SSH1-201ENST00000326470 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
SSH1-201ENST00000326470 KIAA0232Q92628 1395 aa20.45■□□□□ 0.86
SSH1-201ENST00000326470 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
SSH1-201ENST00000326470 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
SSH1-201ENST00000326470 NSFL1CQ9UNZ2 370 aaKnown RBP20.44■□□□□ 0.86
SSH1-201ENST00000326470 HMMRO75330 724 aa20.43■□□□□ 0.86
SSH1-201ENST00000326470 MCM2P49736 904 aa20.43■□□□□ 0.86
SSH1-201ENST00000326470 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
SSH1-201ENST00000326470 TMX3Q96JJ7 454 aa20.43■□□□□ 0.86
SSH1-201ENST00000326470 CHAMP1Q96JM3 812 aa20.43■□□□□ 0.86
SSH1-201ENST00000326470 CSPP1Q1MSJ5 1256 aa20.43■□□□□ 0.86
SSH1-201ENST00000326470 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
SSH1-201ENST00000326470 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
SSH1-201ENST00000326470 PDE1AP54750 535 aa20.42■□□□□ 0.86
SSH1-201ENST00000326470 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
SSH1-201ENST00000326470 NEK4P51957 841 aa20.42■□□□□ 0.86
SSH1-201ENST00000326470 SPATA31D1Q6ZQQ2 1576 aa20.41■□□□□ 0.86
SSH1-201ENST00000326470 BRD1O95696 1058 aa20.41■□□□□ 0.86
SSH1-201ENST00000326470 MLECQ14165 292 aa20.41■□□□□ 0.86
SSH1-201ENST00000326470 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
SSH1-201ENST00000326470 CUL4AQ13619 759 aa20.4■□□□□ 0.86
SSH1-201ENST00000326470 CPS1P31327 1500 aa20.39■□□□□ 0.86
SSH1-201ENST00000326470 RBM10P98175 930 aaKnown RBP20.39■□□□□ 0.85
SSH1-201ENST00000326470 FOXD4L5Q5VV16 416 aaPredicted RBP20.38■□□□□ 0.85
SSH1-201ENST00000326470 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
SSH1-201ENST00000326470 FOXD4L4Q8WXT5 416 aaPredicted RBP20.38■□□□□ 0.85
SSH1-201ENST00000326470 SULT6B1Q6IMI4 303 aa20.38■□□□□ 0.85
SSH1-201ENST00000326470 INTS4Q96HW7 963 aaKnown RBP20.38■□□□□ 0.85
SSH1-201ENST00000326470 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
SSH1-201ENST00000326470 UQCRHLA0A096LP55 91 aa20.37■□□□□ 0.85
SSH1-201ENST00000326470 UQCRHP07919 91 aa20.37■□□□□ 0.85
SSH1-201ENST00000326470 MCM10Q7L590 875 aa20.37■□□□□ 0.85
SSH1-201ENST00000326470 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
SSH1-201ENST00000326470 ESYT1Q9BSJ8 1104 aa20.37■□□□□ 0.85
SSH1-201ENST00000326470 ANAPC15P60006 121 aa20.36■□□□□ 0.85
SSH1-201ENST00000326470 EIF4A2Q14240 407 aaKnown RBP20.36■□□□□ 0.85
SSH1-201ENST00000326470 NRKQ7Z2Y5 1582 aa20.36■□□□□ 0.85
SSH1-201ENST00000326470 MCCP23508 829 aa20.36■□□□□ 0.85
SSH1-201ENST00000326470 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
SSH1-201ENST00000326470 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
SSH1-201ENST00000326470 SALL3Q9BXA9 1300 aa20.35■□□□□ 0.85
SSH1-201ENST00000326470 RNF214Q8ND24 703 aa20.35■□□□□ 0.85
SSH1-201ENST00000326470 CCDC61Q9Y6R9 512 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms