RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 ANKRD26Q9UPS8 1709 aa16.23■□□□□ 0.19
CLGN-201ENST00000325617 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
CLGN-201ENST00000325617 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
CLGN-201ENST00000325617 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
CLGN-201ENST00000325617 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
CLGN-201ENST00000325617 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
CLGN-201ENST00000325617 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
CLGN-201ENST00000325617 USP26Q9BXU7 913 aa16.21■□□□□ 0.19
CLGN-201ENST00000325617 NEO1Q92859 1461 aa16.21■□□□□ 0.19
CLGN-201ENST00000325617 ZBTB7CA1YPR0 619 aa16.21■□□□□ 0.19
CLGN-201ENST00000325617 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
CLGN-201ENST00000325617 ACEP12821 1306 aa16.21■□□□□ 0.19
CLGN-201ENST00000325617 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.18
CLGN-201ENST00000325617 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
CLGN-201ENST00000325617 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
CLGN-201ENST00000325617 ANKRD44Q8N8A2 993 aa16.2■□□□□ 0.18
CLGN-201ENST00000325617 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.2■□□□□ 0.18
CLGN-201ENST00000325617 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
CLGN-201ENST00000325617 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
CLGN-201ENST00000325617 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
CLGN-201ENST00000325617 MAP4K4O95819 1239 aaPredicted RBP16.19■□□□□ 0.18
CLGN-201ENST00000325617 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
CLGN-201ENST00000325617 MTHFSDQ2M296 383 aaKnown RBP16.19■□□□□ 0.18
CLGN-201ENST00000325617 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
CLGN-201ENST00000325617 PRPF40AO75400 957 aaKnown RBP16.18■□□□□ 0.18
CLGN-201ENST00000325617 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
CLGN-201ENST00000325617 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
CLGN-201ENST00000325617 CPSF1Q10570 1443 aaKnown RBP16.18■□□□□ 0.18
CLGN-201ENST00000325617 EDC4Q6P2E9 1401 aaKnown RBP16.18■□□□□ 0.18
CLGN-201ENST00000325617 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
CLGN-201ENST00000325617 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
CLGN-201ENST00000325617 ESPNB1AK53 854 aa16.17■□□□□ 0.18
CLGN-201ENST00000325617 CHL1O00533 1208 aa16.17■□□□□ 0.18
CLGN-201ENST00000325617 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
CLGN-201ENST00000325617 TRIM44Q96DX7 344 aaPredicted RBP16.17■□□□□ 0.18
CLGN-201ENST00000325617 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
CLGN-201ENST00000325617 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
CLGN-201ENST00000325617 RTL1A6NKG5 1358 aa16.17■□□□□ 0.18
CLGN-201ENST00000325617 MPNDQ8N594 471 aa16.17■□□□□ 0.18
CLGN-201ENST00000325617 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
CLGN-201ENST00000325617 CLTCQ00610 1675 aaKnown RBP16.16■□□□□ 0.18
CLGN-201ENST00000325617 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
CLGN-201ENST00000325617 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
CLGN-201ENST00000325617 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
CLGN-201ENST00000325617 USHBP1Q8N6Y0 703 aa16.16■□□□□ 0.18
CLGN-201ENST00000325617 RGS12O14924 1447 aa16.15■□□□□ 0.18
CLGN-201ENST00000325617 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
CLGN-201ENST00000325617 IL1RAPL2Q9NP60 686 aa16.15■□□□□ 0.18
CLGN-201ENST00000325617 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
CLGN-201ENST00000325617 CIZ1Q9ULV3 898 aaPredicted RBP16.15■□□□□ 0.18
CLGN-201ENST00000325617 ATP7BP35670 1465 aa16.14■□□□□ 0.17
CLGN-201ENST00000325617 NEK4P51957 841 aa16.14■□□□□ 0.17
CLGN-201ENST00000325617 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
CLGN-201ENST00000325617 ZDHHC9Q9Y397 364 aa16.14■□□□□ 0.17
CLGN-201ENST00000325617 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
CLGN-201ENST00000325617 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
CLGN-201ENST00000325617 LTKP29376 864 aa16.13■□□□□ 0.17
CLGN-201ENST00000325617 CLCN1P35523 988 aa16.13■□□□□ 0.17
CLGN-201ENST00000325617 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
CLGN-201ENST00000325617 RIMS1Q86UR5 1692 aaKnown RBP16.13■□□□□ 0.17
CLGN-201ENST00000325617 NASPP49321 788 aaPredicted RBP16.13■□□□□ 0.17
CLGN-201ENST00000325617 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
CLGN-201ENST00000325617 RABEP1Q15276 862 aa16.13■□□□□ 0.17
CLGN-201ENST00000325617 GDPD2Q9HCC8 539 aa16.13■□□□□ 0.17
CLGN-201ENST00000325617 SETD1BQ9UPS6 1966 aaKnown RBP16.13■□□□□ 0.17
CLGN-201ENST00000325617 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
CLGN-201ENST00000325617 CDK12Q9NYV4 1490 aaPredicted RBP16.13■□□□□ 0.17
CLGN-201ENST00000325617 RTF1Q92541 710 aaKnown RBP16.12■□□□□ 0.17
CLGN-201ENST00000325617 IL25Q9H293 177 aa16.12■□□□□ 0.17
CLGN-201ENST00000325617 PDE1AP54750 535 aa16.12■□□□□ 0.17
CLGN-201ENST00000325617 RNF214Q8ND24 703 aa16.12■□□□□ 0.17
CLGN-201ENST00000325617 CDC42BPGQ6DT37 1551 aa16.12■□□□□ 0.17
CLGN-201ENST00000325617 GOLGA6L22H0YM25 854 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 ANXA1P04083 346 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
CLGN-201ENST00000325617 LMBRD1Q9NUN5 540 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 AMPHP49418 695 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 EYA1Q99502 592 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 RBSNQ9H1K0 784 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 PRIM1P49642 420 aaKnown RBP16.11■□□□□ 0.17
CLGN-201ENST00000325617 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 GPT2Q8TD30 523 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
CLGN-201ENST00000325617 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
CLGN-201ENST00000325617 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
CLGN-201ENST00000325617 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
CLGN-201ENST00000325617 LRRFIP2Q9Y608 721 aaKnown RBP16.09■□□□□ 0.17
CLGN-201ENST00000325617 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.17
CLGN-201ENST00000325617 PHAXQ9H814 394 aaKnown RBP16.08■□□□□ 0.17
CLGN-201ENST00000325617 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.17
CLGN-201ENST00000325617 ERC2O15083 957 aa16.08■□□□□ 0.16
CLGN-201ENST00000325617 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
CLGN-201ENST00000325617 DLC1Q96QB1 1528 aa16.08■□□□□ 0.16
CLGN-201ENST00000325617 SYCE3A1L190 88 aa16.08■□□□□ 0.16
CLGN-201ENST00000325617 KLHL40Q2TBA0 621 aa16.08■□□□□ 0.16
CLGN-201ENST00000325617 ST18O60284 1047 aa16.07■□□□□ 0.16
CLGN-201ENST00000325617 CASC1Q6TDU7 716 aa16.07■□□□□ 0.16
CLGN-201ENST00000325617 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
CLGN-201ENST00000325617 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
CLGN-201ENST00000325617 TMEM63CQ9P1W3 806 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms