RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
USHBP1-202ENST00000324554 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
USHBP1-202ENST00000324554 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
USHBP1-202ENST00000324554 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
USHBP1-202ENST00000324554 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
USHBP1-202ENST00000324554 FMN2Q9NZ56 1722 aa20.16■□□□□ 0.82
USHBP1-202ENST00000324554 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
USHBP1-202ENST00000324554 SULT6B1Q6IMI4 303 aa20.14■□□□□ 0.82
USHBP1-202ENST00000324554 TTC21AQ8NDW8 1320 aa20.14■□□□□ 0.81
USHBP1-202ENST00000324554 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
USHBP1-202ENST00000324554 FOXO3O43524 673 aa20.13■□□□□ 0.81
USHBP1-202ENST00000324554 SIRT2Q8IXJ6 389 aa20.13■□□□□ 0.81
USHBP1-202ENST00000324554 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
USHBP1-202ENST00000324554 MAP3K19Q56UN5 1328 aa20.13■□□□□ 0.81
USHBP1-202ENST00000324554 ADGRL3Q9HAR2 1447 aa20.13■□□□□ 0.81
USHBP1-202ENST00000324554 PSME1Q06323 249 aa20.13■□□□□ 0.81
USHBP1-202ENST00000324554 ANKRD45Q5TZF3 282 aa20.12■□□□□ 0.81
USHBP1-202ENST00000324554 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
USHBP1-202ENST00000324554 PEAK1Q9H792 1746 aa20.11■□□□□ 0.81
USHBP1-202ENST00000324554 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
USHBP1-202ENST00000324554 RGPD1P0DJD0 1748 aa20.1■□□□□ 0.81
USHBP1-202ENST00000324554 AMPHP49418 695 aa20.1■□□□□ 0.81
USHBP1-202ENST00000324554 LMOD2Q6P5Q4 547 aa20.1■□□□□ 0.81
USHBP1-202ENST00000324554 PIK3C2AO00443 1686 aa20.09■□□□□ 0.81
USHBP1-202ENST00000324554 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
USHBP1-202ENST00000324554 MCM4P33991 863 aa20.09■□□□□ 0.81
USHBP1-202ENST00000324554 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
USHBP1-202ENST00000324554 RBM25P49756 843 aaKnown RBP20.08■□□□□ 0.81
USHBP1-202ENST00000324554 CHMP5Q9NZZ3 219 aa20.08■□□□□ 0.81
USHBP1-202ENST00000324554 CHL1O00533 1208 aa20.07■□□□□ 0.8
USHBP1-202ENST00000324554 KRT24Q2M2I5 525 aa20.07■□□□□ 0.8
USHBP1-202ENST00000324554 MCM10Q7L590 875 aa20.07■□□□□ 0.8
USHBP1-202ENST00000324554 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
USHBP1-202ENST00000324554 DDX17Q92841 729 aaKnown RBP20.06■□□□□ 0.8
USHBP1-202ENST00000324554 HSCBQ8IWL3 235 aa20.06■□□□□ 0.8
USHBP1-202ENST00000324554 RGS12O14924 1447 aa20.05■□□□□ 0.8
USHBP1-202ENST00000324554 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
USHBP1-202ENST00000324554 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
USHBP1-202ENST00000324554 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
USHBP1-202ENST00000324554 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
USHBP1-202ENST00000324554 INTS3Q68E01 1043 aaKnown RBP20.04■□□□□ 0.8
USHBP1-202ENST00000324554 NCOA3Q9Y6Q9 1424 aa20.04■□□□□ 0.8
USHBP1-202ENST00000324554 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
USHBP1-202ENST00000324554 DDIT3P35638 169 aa20.02■□□□□ 0.8
USHBP1-202ENST00000324554 CRB1P82279 1406 aa20.02■□□□□ 0.8
USHBP1-202ENST00000324554 STRCP1A6NGW2 1772 aa20.02■□□□□ 0.79
USHBP1-202ENST00000324554 GZF1Q9H116 711 aaPredicted RBP20.02■□□□□ 0.79
USHBP1-202ENST00000324554 L1TD1Q5T7N2 865 aaKnown RBP20.01■□□□□ 0.79
USHBP1-202ENST00000324554 KIF2CQ99661 725 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 NWD1Q149M9 1564 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 ATF3P18847 181 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 TBC1D9Q6ZT07 1266 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 SNX21Q969T3 373 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 ARXQ96QS3 562 aa20.01■□□□□ 0.79
USHBP1-202ENST00000324554 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-202ENST00000324554 ATP10DQ9P241 1426 aa20■□□□□ 0.79
USHBP1-202ENST00000324554 DCTPP1Q9H773 170 aa20■□□□□ 0.79
USHBP1-202ENST00000324554 FLT4P35916 1363 aa20■□□□□ 0.79
USHBP1-202ENST00000324554 HOXC9P31274 260 aa20■□□□□ 0.79
USHBP1-202ENST00000324554 EYA1Q99502 592 aa20■□□□□ 0.79
USHBP1-202ENST00000324554 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
USHBP1-202ENST00000324554 TRAK2O60296 914 aa19.99■□□□□ 0.79
USHBP1-202ENST00000324554 FSD2A1L4K1 749 aa19.98■□□□□ 0.79
USHBP1-202ENST00000324554 PTPRCP08575 1304 aa19.98■□□□□ 0.79
USHBP1-202ENST00000324554 KRT28Q7Z3Y7 464 aa19.98■□□□□ 0.79
USHBP1-202ENST00000324554 MSH6P52701 1360 aa19.98■□□□□ 0.79
USHBP1-202ENST00000324554 MARF1Q9Y4F3 1742 aaKnown RBP19.98■□□□□ 0.79
USHBP1-202ENST00000324554 LMTK3Q96Q04 1460 aa19.97■□□□□ 0.79
USHBP1-202ENST00000324554 KDRP35968 1356 aa19.97■□□□□ 0.79
USHBP1-202ENST00000324554 XRCC6P12956 609 aaKnown RBP eCLIP19.97■□□□□ 0.79
USHBP1-202ENST00000324554 MTHFSDQ2M296 383 aaKnown RBP19.97■□□□□ 0.79
USHBP1-202ENST00000324554 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
USHBP1-202ENST00000324554 ANKRD44Q8N8A2 993 aa19.97■□□□□ 0.79
USHBP1-202ENST00000324554 GSPT1P15170 499 aaKnown RBP19.97■□□□□ 0.79
USHBP1-202ENST00000324554 C1orf167Q5SNV9 1468 aa19.97■□□□□ 0.79
USHBP1-202ENST00000324554 CD2BP2O95400 341 aaKnown RBP19.96■□□□□ 0.79
USHBP1-202ENST00000324554 PLEKHM2Q8IWE5 1019 aa19.96■□□□□ 0.79
USHBP1-202ENST00000324554 GOLGA6L3A6NEY3 463 aa19.96■□□□□ 0.79
USHBP1-202ENST00000324554 CDC45O75419 566 aa19.95■□□□□ 0.78
USHBP1-202ENST00000324554 CEP85Q6P2H3 762 aa19.95■□□□□ 0.78
USHBP1-202ENST00000324554 RPAP2Q8IXW5 612 aaPredicted RBP19.95■□□□□ 0.78
USHBP1-202ENST00000324554 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
USHBP1-202ENST00000324554 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
USHBP1-202ENST00000324554 ZNF335Q9H4Z2 1342 aaPredicted RBP19.95■□□□□ 0.78
USHBP1-202ENST00000324554 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
USHBP1-202ENST00000324554 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
USHBP1-202ENST00000324554 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
USHBP1-202ENST00000324554 HSP90AB1P08238 724 aaKnown RBP19.93■□□□□ 0.78
USHBP1-202ENST00000324554 MEIS3Q99687 375 aa19.93■□□□□ 0.78
USHBP1-202ENST00000324554 TNPO1Q92973 898 aaKnown RBP19.93■□□□□ 0.78
USHBP1-202ENST00000324554 RBM42Q9BTD8 480 aaKnown RBP19.93■□□□□ 0.78
USHBP1-202ENST00000324554 PANK2Q9BZ23 570 aa19.93■□□□□ 0.78
USHBP1-202ENST00000324554 TSPYL4Q9UJ04 414 aa19.93■□□□□ 0.78
USHBP1-202ENST00000324554 DDX11L8A8MPP1 907 aa19.92■□□□□ 0.78
USHBP1-202ENST00000324554 GCP02774 474 aa19.92■□□□□ 0.78
USHBP1-202ENST00000324554 TTC22Q5TAA0 569 aa19.92■□□□□ 0.78
USHBP1-202ENST00000324554 C16orf71Q8IYS4 520 aaPredicted RBP19.92■□□□□ 0.78
USHBP1-202ENST00000324554 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
USHBP1-202ENST00000324554 GAS2L2Q8NHY3 880 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms