RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
CD46-202ENST00000322918 USP35Q9P2H5 1018 aa11.62□□□□□ -0.55
CD46-202ENST00000322918 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
CD46-202ENST00000322918 MVPQ14764 893 aaKnown RBP11.61□□□□□ -0.55
CD46-202ENST00000322918 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
CD46-202ENST00000322918 ARHGEF25Q86VW2 580 aa11.61□□□□□ -0.55
CD46-202ENST00000322918 SLAIN2Q9P270 581 aa11.61□□□□□ -0.55
CD46-202ENST00000322918 ZNF530Q6P9A1 599 aaPredicted RBP11.61□□□□□ -0.55
CD46-202ENST00000322918 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
CD46-202ENST00000322918 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
CD46-202ENST00000322918 SLC4A10Q6U841 1118 aa11.6□□□□□ -0.55
CD46-202ENST00000322918 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
CD46-202ENST00000322918 ARHGEF10O15013 1369 aa11.6□□□□□ -0.55
CD46-202ENST00000322918 EIF2S2P20042 333 aaKnown RBP11.6□□□□□ -0.55
CD46-202ENST00000322918 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
CD46-202ENST00000322918 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
CD46-202ENST00000322918 LMTK3Q96Q04 1460 aa11.6□□□□□ -0.55
CD46-202ENST00000322918 IPO8O15397 1037 aaKnown RBP11.59□□□□□ -0.55
CD46-202ENST00000322918 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
CD46-202ENST00000322918 MST1RQ04912 1400 aa11.59□□□□□ -0.55
CD46-202ENST00000322918 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.56
CD46-202ENST00000322918 STRN4Q9NRL3 753 aa11.58□□□□□ -0.56
CD46-202ENST00000322918 KIF16BQ96L93 1317 aa11.58□□□□□ -0.56
CD46-202ENST00000322918 STRCP1A6NGW2 1772 aa11.58□□□□□ -0.56
CD46-202ENST00000322918 F6X3S4 739 aa11.58□□□□□ -0.56
CD46-202ENST00000322918 CHL1O00533 1208 aa11.58□□□□□ -0.56
CD46-202ENST00000322918 KDM2BQ8NHM5 1336 aa11.58□□□□□ -0.56
CD46-202ENST00000322918 KCNQ3O43525 872 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 PRDM11Q9NQV5 511 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 APBB1O00213 710 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 ANXA1P04083 346 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 CT47B1P0C2W7 299 aaPredicted RBP11.57□□□□□ -0.56
CD46-202ENST00000322918 PDE4AP27815 886 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 TEFQ10587 303 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
CD46-202ENST00000322918 G2E3Q7L622 706 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
CD46-202ENST00000322918 C1orf141Q5JVX7 400 aa11.56□□□□□ -0.56
CD46-202ENST00000322918 ALDH1L2Q3SY69 923 aa11.55□□□□□ -0.56
CD46-202ENST00000322918 RAPGEF4Q8WZA2 1011 aa11.55□□□□□ -0.56
CD46-202ENST00000322918 DDX19BQ9UMR2 479 aa11.55□□□□□ -0.56
CD46-202ENST00000322918 KDRP35968 1356 aa11.55□□□□□ -0.56
CD46-202ENST00000322918 KIAA0232Q92628 1395 aa11.55□□□□□ -0.56
CD46-202ENST00000322918 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
CD46-202ENST00000322918 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
CD46-202ENST00000322918 MAP3K5Q99683 1374 aa11.55□□□□□ -0.56
CD46-202ENST00000322918 PIP4K2BP78356 416 aa11.54□□□□□ -0.56
CD46-202ENST00000322918 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
CD46-202ENST00000322918 MS4A1P11836 297 aa11.54□□□□□ -0.56
CD46-202ENST00000322918 TAF7Q15545 349 aaPredicted RBP11.54□□□□□ -0.56
CD46-202ENST00000322918 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
CD46-202ENST00000322918 ERBB3P21860 1342 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 SLC39A6Q13433 755 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 FKBP5Q13451 457 aaPredicted RBP11.53□□□□□ -0.56
CD46-202ENST00000322918 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
CD46-202ENST00000322918 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 LTN1O94822 1766 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 CRB1P82279 1406 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 NWD1Q149M9 1564 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
CD46-202ENST00000322918 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.53□□□□□ -0.56
CD46-202ENST00000322918 NFAT5O94916 1531 aa11.52□□□□□ -0.56
CD46-202ENST00000322918 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.56
CD46-202ENST00000322918 USP19O94966 1318 aa11.52□□□□□ -0.57
CD46-202ENST00000322918 A0A0G2JS52 829 aa11.52□□□□□ -0.57
CD46-202ENST00000322918 EVA1CP58658 441 aa11.51□□□□□ -0.57
CD46-202ENST00000322918 HDGFL1Q5TGJ6 251 aa11.51□□□□□ -0.57
CD46-202ENST00000322918 MARF1Q9Y4F3 1742 aaKnown RBP11.51□□□□□ -0.57
CD46-202ENST00000322918 PIP4K2AP48426 406 aaPredicted RBP11.51□□□□□ -0.57
CD46-202ENST00000322918 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
CD46-202ENST00000322918 LNPKQ9C0E8 428 aa11.51□□□□□ -0.57
CD46-202ENST00000322918 ZBTB40Q9NUA8 1239 aa11.51□□□□□ -0.57
CD46-202ENST00000322918 RTL1A6NKG5 1358 aa11.51□□□□□ -0.57
CD46-202ENST00000322918 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
CD46-202ENST00000322918 RGPD2P0DJD1 1756 aa11.5□□□□□ -0.57
CD46-202ENST00000322918 TATP17735 454 aaPredicted RBP11.5□□□□□ -0.57
CD46-202ENST00000322918 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
CD46-202ENST00000322918 STRCQ7RTU9 1775 aa11.5□□□□□ -0.57
CD46-202ENST00000322918 KIF24Q5T7B8 1368 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
CD46-202ENST00000322918 AKAP4Q5JQC9 854 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 ADAMTS2O95450 1211 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 MEIS3Q99687 375 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 PXDNQ92626 1479 aa11.49□□□□□ -0.57
CD46-202ENST00000322918 NUTM2BA6NNL0 878 aaPredicted RBP11.49□□□□□ -0.57
CD46-202ENST00000322918 NUTM2EB1AL46 878 aaPredicted RBP11.49□□□□□ -0.57
CD46-202ENST00000322918 RNMTO43148 476 aaKnown RBP11.49□□□□□ -0.57
CD46-202ENST00000322918 ANP32AP39687 249 aaKnown RBP11.49□□□□□ -0.57
CD46-202ENST00000322918 NUTM2AQ8IVF1 878 aaPredicted RBP11.49□□□□□ -0.57
CD46-202ENST00000322918 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
CD46-202ENST00000322918 AIMP1Q12904 312 aaKnown RBP11.48□□□□□ -0.57
CD46-202ENST00000322918 ANKRD45Q5TZF3 282 aa11.48□□□□□ -0.57
CD46-202ENST00000322918 MED1Q15648 1581 aaPredicted RBP11.48□□□□□ -0.57
CD46-202ENST00000322918 RTL5Q5HYW3 569 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms