RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 XIRP1Q702N8 1843 aaKnown RBP25.57■■□□□ 1.68
PDZD3-201ENST00000322712 BRPF1P55201 1214 aaPredicted RBP25.57■■□□□ 1.68
PDZD3-201ENST00000322712 MSH6P52701 1360 aa25.56■■□□□ 1.68
PDZD3-201ENST00000322712 DCCP43146 1447 aa25.56■■□□□ 1.68
PDZD3-201ENST00000322712 CRB1P82279 1406 aa25.56■■□□□ 1.68
PDZD3-201ENST00000322712 NFAT5O94916 1531 aa25.55■■□□□ 1.68
PDZD3-201ENST00000322712 MST1RQ04912 1400 aa25.55■■□□□ 1.68
PDZD3-201ENST00000322712 KIF24Q5T7B8 1368 aa25.55■■□□□ 1.68
PDZD3-201ENST00000322712 ANP32AP39687 249 aaKnown RBP25.55■■□□□ 1.68
PDZD3-201ENST00000322712 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
PDZD3-201ENST00000322712 RTF1Q92541 710 aaKnown RBP25.53■■□□□ 1.68
PDZD3-201ENST00000322712 RWDD1Q9H446 243 aaPredicted RBP25.53■■□□□ 1.68
PDZD3-201ENST00000322712 C8orf34Q49A92 452 aa25.53■■□□□ 1.68
PDZD3-201ENST00000322712 IP6K1Q92551 441 aa25.53■■□□□ 1.68
PDZD3-201ENST00000322712 ZBTB40Q9NUA8 1239 aa25.53■■□□□ 1.68
PDZD3-201ENST00000322712 KIF1AQ12756 1690 aa25.51■■□□□ 1.67
PDZD3-201ENST00000322712 DDX17Q92841 729 aaKnown RBP25.51■■□□□ 1.67
PDZD3-201ENST00000322712 GAS2L2Q8NHY3 880 aa25.51■■□□□ 1.67
PDZD3-201ENST00000322712 PDZRN3Q9UPQ7 1066 aa25.51■■□□□ 1.67
PDZD3-201ENST00000322712 GCP02774 474 aa25.5■■□□□ 1.67
PDZD3-201ENST00000322712 NBPF6Q5VWK0 638 aa25.5■■□□□ 1.67
PDZD3-201ENST00000322712 KRT28Q7Z3Y7 464 aa25.5■■□□□ 1.67
PDZD3-201ENST00000322712 NBPF4Q96M43 638 aa25.5■■□□□ 1.67
PDZD3-201ENST00000322712 RTL1A6NKG5 1358 aa25.49■■□□□ 1.67
PDZD3-201ENST00000322712 FAM161AQ3B820 660 aa25.49■■□□□ 1.67
PDZD3-201ENST00000322712 KCNH5Q8NCM2 988 aa25.48■■□□□ 1.67
PDZD3-201ENST00000322712 ARHGAP45Q92619 1136 aa25.48■■□□□ 1.67
PDZD3-201ENST00000322712 LRRC59Q96AG4 307 aaKnown RBP25.48■■□□□ 1.67
PDZD3-201ENST00000322712 IPO9Q96P70 1041 aaKnown RBP25.47■■□□□ 1.67
PDZD3-201ENST00000322712 TSPYL4Q9UJ04 414 aa25.47■■□□□ 1.67
PDZD3-201ENST00000322712 GNAT3A8MTJ3 354 aa25.46■■□□□ 1.67
PDZD3-201ENST00000322712 ZBTB7BO15156 539 aaPredicted RBP25.45■■□□□ 1.67
PDZD3-201ENST00000322712 C1orf115Q9H7X2 142 aa25.45■■□□□ 1.67
PDZD3-201ENST00000322712 IL17REQ8NFR9 667 aa25.45■■□□□ 1.66
PDZD3-201ENST00000322712 ABCC4O15439 1325 aa25.45■■□□□ 1.66
PDZD3-201ENST00000322712 RGPD2P0DJD1 1756 aa25.45■■□□□ 1.66
PDZD3-201ENST00000322712 HDAC1Q13547 482 aaPredicted RBP25.44■■□□□ 1.66
PDZD3-201ENST00000322712 TRPM3Q9HCF6 1732 aaPredicted RBP25.44■■□□□ 1.66
PDZD3-201ENST00000322712 ARHGEF25Q86VW2 580 aa25.44■■□□□ 1.66
PDZD3-201ENST00000322712 KIAA0232Q92628 1395 aa25.44■■□□□ 1.66
PDZD3-201ENST00000322712 AXIN2Q9Y2T1 843 aa25.41■■□□□ 1.66
PDZD3-201ENST00000322712 MAP3K5Q99683 1374 aa25.41■■□□□ 1.66
PDZD3-201ENST00000322712 NOP58Q9Y2X3 529 aaKnown RBP25.4■■□□□ 1.66
PDZD3-201ENST00000322712 SLIT3O75094 1523 aa25.4■■□□□ 1.66
PDZD3-201ENST00000322712 HTATSF1O43719 755 aaKnown RBP25.39■■□□□ 1.66
PDZD3-201ENST00000322712 API5Q9BZZ5 524 aaKnown RBP25.39■■□□□ 1.66
PDZD3-201ENST00000322712 USP19O94966 1318 aa25.38■■□□□ 1.65
PDZD3-201ENST00000322712 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
PDZD3-201ENST00000322712 SLC4A2P04920 1241 aa25.38■■□□□ 1.65
PDZD3-201ENST00000322712 ZC3H6P61129 1189 aaKnown RBP25.38■■□□□ 1.65
PDZD3-201ENST00000322712 RGS12O14924 1447 aa25.37■■□□□ 1.65
PDZD3-201ENST00000322712 SLAIN2Q9P270 581 aa25.37■■□□□ 1.65
PDZD3-201ENST00000322712 LRRC37A3O60309 1634 aa25.37■■□□□ 1.65
PDZD3-201ENST00000322712 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
PDZD3-201ENST00000322712 PHRF1Q9P1Y6 1649 aaKnown RBP25.36■■□□□ 1.65
PDZD3-201ENST00000322712 G2E3Q7L622 706 aa25.36■■□□□ 1.65
PDZD3-201ENST00000322712 SMC5Q8IY18 1101 aa25.36■■□□□ 1.65
PDZD3-201ENST00000322712 ANKRD24Q8TF21 1146 aa25.36■■□□□ 1.65
PDZD3-201ENST00000322712 NECTIN2Q92692 538 aa25.35■■□□□ 1.65
PDZD3-201ENST00000322712 LGR6Q9HBX8 967 aa25.35■■□□□ 1.65
PDZD3-201ENST00000322712 SEC24BO95487 1268 aa25.34■■□□□ 1.65
PDZD3-201ENST00000322712 HAP1P54257 671 aaPredicted RBP25.34■■□□□ 1.65
PDZD3-201ENST00000322712 BCL11AQ9H165 835 aa25.34■■□□□ 1.65
PDZD3-201ENST00000322712 ALS2Q96Q42 1657 aa25.33■■□□□ 1.65
PDZD3-201ENST00000322712 SIRT2Q8IXJ6 389 aa25.33■■□□□ 1.65
PDZD3-201ENST00000322712 CABLES1Q8TDN4 633 aa25.33■■□□□ 1.65
PDZD3-201ENST00000322712 ZBTB47Q9UFB7 747 aaPredicted RBP25.33■■□□□ 1.65
PDZD3-201ENST00000322712 MED1Q15648 1581 aaPredicted RBP25.32■■□□□ 1.64
PDZD3-201ENST00000322712 TAF7Q15545 349 aaPredicted RBP25.32■■□□□ 1.64
PDZD3-201ENST00000322712 RGPD5Q99666 1765 aa25.31■■□□□ 1.64
PDZD3-201ENST00000322712 INTS3Q68E01 1043 aaKnown RBP25.3■■□□□ 1.64
PDZD3-201ENST00000322712 PXDNQ92626 1479 aa25.3■■□□□ 1.64
PDZD3-201ENST00000322712 F6X3S4 739 aa25.29■■□□□ 1.64
PDZD3-201ENST00000322712 ZNF530Q6P9A1 599 aaPredicted RBP25.28■■□□□ 1.64
PDZD3-201ENST00000322712 MPRIPQ6WCQ1 1025 aa25.28■■□□□ 1.64
PDZD3-201ENST00000322712 LNPKQ9C0E8 428 aa25.28■■□□□ 1.64
PDZD3-201ENST00000322712 VIRMAQ69YN4 1812 aaKnown RBP25.28■■□□□ 1.64
PDZD3-201ENST00000322712 CEMIPQ8WUJ3 1361 aa25.28■■□□□ 1.64
PDZD3-201ENST00000322712 PTPRCP08575 1304 aa25.28■■□□□ 1.64
PDZD3-201ENST00000322712 TNS3Q68CZ2 1445 aa25.27■■□□□ 1.64
PDZD3-201ENST00000322712 CHMP4BQ9H444 224 aaKnown RBP25.27■■□□□ 1.64
PDZD3-201ENST00000322712 NUCB1Q02818 461 aa25.27■■□□□ 1.64
PDZD3-201ENST00000322712 SLC4A10Q6U841 1118 aa25.25■■□□□ 1.63
PDZD3-201ENST00000322712 ERBB3P21860 1342 aa25.24■■□□□ 1.63
PDZD3-201ENST00000322712 SPATA31A3Q5VYP0 1347 aa25.24■■□□□ 1.63
PDZD3-201ENST00000322712 KCNQ3O43525 872 aa25.24■■□□□ 1.63
PDZD3-201ENST00000322712 PLEKHO1Q53GL0 409 aaPredicted RBP25.24■■□□□ 1.63
PDZD3-201ENST00000322712 MEIS3Q99687 375 aa25.24■■□□□ 1.63
PDZD3-201ENST00000322712 AKAP4Q5JQC9 854 aa25.23■■□□□ 1.63
PDZD3-201ENST00000322712 ANKRD45Q5TZF3 282 aa25.23■■□□□ 1.63
PDZD3-201ENST00000322712 CHD1LQ86WJ1 897 aa25.23■■□□□ 1.63
PDZD3-201ENST00000322712 STK31Q9BXU1 1019 aa25.23■■□□□ 1.63
PDZD3-201ENST00000322712 NCAPD2Q15021 1401 aa25.23■■□□□ 1.63
PDZD3-201ENST00000322712 CHRNA2Q15822 529 aa25.22■■□□□ 1.63
PDZD3-201ENST00000322712 CCDC30Q5VVM6 783 aa25.21■■□□□ 1.63
PDZD3-201ENST00000322712 SLC4A3P48751 1232 aa25.21■■□□□ 1.63
PDZD3-201ENST00000322712 FLIIQ13045 1269 aa25.2■■□□□ 1.62
PDZD3-201ENST00000322712 AMOTQ4VCS5 1084 aa25.2■■□□□ 1.62
PDZD3-201ENST00000322712 BABAM1Q9NWV8 329 aa25.2■■□□□ 1.62
PDZD3-201ENST00000322712 NLRP2Q9NX02 1062 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms