RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
LTBP3-202ENST00000322147 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
LTBP3-202ENST00000322147 RPAP2Q8IXW5 612 aaPredicted RBP22.15■■□□□ 1.14
LTBP3-202ENST00000322147 SPC24Q8NBT2 197 aa22.15■■□□□ 1.14
LTBP3-202ENST00000322147 ACEP12821 1306 aa22.15■■□□□ 1.14
LTBP3-202ENST00000322147 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
LTBP3-202ENST00000322147 ADGBQ8N7X0 1667 aa22.15■■□□□ 1.14
LTBP3-202ENST00000322147 RAD21O60216 631 aa22.15■■□□□ 1.14
LTBP3-202ENST00000322147 A2MP01023 1474 aa22.14■■□□□ 1.14
LTBP3-202ENST00000322147 PIP4K2AP48426 406 aaPredicted RBP22.14■■□□□ 1.14
LTBP3-202ENST00000322147 CCDC8Q9H0W5 538 aaPredicted RBP22.14■■□□□ 1.14
LTBP3-202ENST00000322147 IFT57Q9NWB7 429 aa22.14■■□□□ 1.14
LTBP3-202ENST00000322147 MAGI2Q86UL8 1455 aa22.14■■□□□ 1.13
LTBP3-202ENST00000322147 CCAR2Q8N163 923 aaKnown RBP22.14■■□□□ 1.13
LTBP3-202ENST00000322147 BOLA2Q9H3K6 86 aa22.14■■□□□ 1.13
LTBP3-202ENST00000322147 SPG7Q9UQ90 795 aa22.14■■□□□ 1.13
LTBP3-202ENST00000322147 KIF3AQ9Y496 699 aa22.14■■□□□ 1.13
LTBP3-202ENST00000322147 ITSN2Q9NZM3 1697 aa22.13■■□□□ 1.13
LTBP3-202ENST00000322147 NFXL1Q6ZNB6 911 aa22.13■■□□□ 1.13
LTBP3-202ENST00000322147 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
LTBP3-202ENST00000322147 JAKMIP1Q96N16 626 aaKnown RBP22.13■■□□□ 1.13
LTBP3-202ENST00000322147 PLCH2O75038 1416 aa22.12■■□□□ 1.13
LTBP3-202ENST00000322147 CLSTN1O94985 981 aa22.12■■□□□ 1.13
LTBP3-202ENST00000322147 DISP1Q96F81 1524 aa22.12■■□□□ 1.13
LTBP3-202ENST00000322147 CFAP65Q6ZU64 1925 aaKnown RBP22.11■■□□□ 1.13
LTBP3-202ENST00000322147 ERBB4Q15303 1308 aa22.11■■□□□ 1.13
LTBP3-202ENST00000322147 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
LTBP3-202ENST00000322147 FLIIQ13045 1269 aa22.11■■□□□ 1.13
LTBP3-202ENST00000322147 DDX11Q96FC9 970 aa22.11■■□□□ 1.13
LTBP3-202ENST00000322147 MX1P20591 662 aa22.11■■□□□ 1.13
LTBP3-202ENST00000322147 PDE4CQ08493 712 aa22.11■■□□□ 1.13
LTBP3-202ENST00000322147 SYCE3A1L190 88 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 CCDC173Q0VFZ6 552 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 TRDNQ13061 729 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 PDCL3Q9H2J4 239 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 PIK3C2GO75747 1445 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 SDF4Q9BRK5 362 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 E9PCH4 1651 aa22.1■■□□□ 1.13
LTBP3-202ENST00000322147 RRP12Q5JTH9 1297 aaKnown RBP22.09■■□□□ 1.13
LTBP3-202ENST00000322147 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
LTBP3-202ENST00000322147 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-202ENST00000322147 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
LTBP3-202ENST00000322147 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-202ENST00000322147 RALYLQ86SE5 291 aaKnown RBP22.09■■□□□ 1.13
LTBP3-202ENST00000322147 VPS37DQ86XT2 251 aa22.09■■□□□ 1.13
LTBP3-202ENST00000322147 CABP4P57796 275 aa22.09■■□□□ 1.13
LTBP3-202ENST00000322147 TCEANC2Q96MN5 208 aa22.09■■□□□ 1.13
LTBP3-202ENST00000322147 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
LTBP3-202ENST00000322147 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.13
LTBP3-202ENST00000322147 ANKLE2Q86XL3 938 aa22.08■■□□□ 1.13
LTBP3-202ENST00000322147 PI4KAP1Q8N8J0 262 aa22.08■■□□□ 1.13
LTBP3-202ENST00000322147 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
LTBP3-202ENST00000322147 KIAA0556O60303 1618 aa22.08■■□□□ 1.12
LTBP3-202ENST00000322147 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.12
LTBP3-202ENST00000322147 ZSCAN30Q86W11 494 aa22.08■■□□□ 1.12
LTBP3-202ENST00000322147 GAS2L3Q86XJ1 694 aa22.08■■□□□ 1.12
LTBP3-202ENST00000322147 CHRNA2Q15822 529 aa22.07■■□□□ 1.12
LTBP3-202ENST00000322147 CASTP20810 708 aaKnown RBP22.06■■□□□ 1.12
LTBP3-202ENST00000322147 PRPF40BQ6NWY9 871 aaKnown RBP22.06■■□□□ 1.12
LTBP3-202ENST00000322147 CCDC83Q8IWF9 413 aa22.06■■□□□ 1.12
LTBP3-202ENST00000322147 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.06■■□□□ 1.12
LTBP3-202ENST00000322147 SASS6Q6UVJ0 657 aa22.06■■□□□ 1.12
LTBP3-202ENST00000322147 ATP5J2-PTCD1G3V325 749 aa22.05■■□□□ 1.12
LTBP3-202ENST00000322147 LARP1BQ659C4 914 aaKnown RBP22.05■■□□□ 1.12
LTBP3-202ENST00000322147 CYP46A1Q9Y6A2 500 aa22.05■■□□□ 1.12
LTBP3-202ENST00000322147 AKAP17AQ02040 695 aaKnown RBP22.05■■□□□ 1.12
LTBP3-202ENST00000322147 CPLX2Q6PUV4 134 aaKnown RBP22.05■■□□□ 1.12
LTBP3-202ENST00000322147 OTUD7AQ8TE49 926 aaPredicted RBP22.05■■□□□ 1.12
LTBP3-202ENST00000322147 CIZ1Q9ULV3 898 aaPredicted RBP22.04■■□□□ 1.12
LTBP3-202ENST00000322147 ASXL2Q76L83 1435 aa22.04■■□□□ 1.12
LTBP3-202ENST00000322147 VAMP4O75379 141 aa22.04■■□□□ 1.12
LTBP3-202ENST00000322147 SYNE3Q6ZMZ3 975 aa22.04■■□□□ 1.12
LTBP3-202ENST00000322147 PHF8Q9UPP1 1060 aa22.04■■□□□ 1.12
LTBP3-202ENST00000322147 TPM4P67936 248 aa22.03■■□□□ 1.12
LTBP3-202ENST00000322147 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
LTBP3-202ENST00000322147 TRIM5Q9C035 493 aa22.03■■□□□ 1.12
LTBP3-202ENST00000322147 RBM27Q9P2N5 1060 aaKnown RBP22.03■■□□□ 1.12
LTBP3-202ENST00000322147 SDSP20132 328 aa22.03■■□□□ 1.12
LTBP3-202ENST00000322147 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
LTBP3-202ENST00000322147 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
LTBP3-202ENST00000322147 SLC39A6Q13433 755 aa22.03■■□□□ 1.12
LTBP3-202ENST00000322147 CCDC73Q6ZRK6 1079 aa22.02■■□□□ 1.12
LTBP3-202ENST00000322147 CAMK4Q16566 473 aa22.02■■□□□ 1.12
LTBP3-202ENST00000322147 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.11
LTBP3-202ENST00000322147 PPP1R42Q7Z4L9 355 aa22.02■■□□□ 1.11
LTBP3-202ENST00000322147 SHANK2Q9UPX8 1470 aa22.02■■□□□ 1.11
LTBP3-202ENST00000322147 TRPM1Q7Z4N2 1603 aa22.01■■□□□ 1.11
LTBP3-202ENST00000322147 LRRC59Q96AG4 307 aaKnown RBP22.01■■□□□ 1.11
LTBP3-202ENST00000322147 G3V3G9 751 aa22.01■■□□□ 1.11
LTBP3-202ENST00000322147 DCAF8Q5TAQ9 597 aa22.01■■□□□ 1.11
LTBP3-202ENST00000322147 A0A1W2PP64 1363 aa22.01■■□□□ 1.11
LTBP3-202ENST00000322147 BMP2KLQ5H9B9 411 aa22.01■■□□□ 1.11
LTBP3-202ENST00000322147 VPS53Q5VIR6 699 aa22.01■■□□□ 1.11
LTBP3-202ENST00000322147 TRIM29Q14134 588 aa22■■□□□ 1.11
LTBP3-202ENST00000322147 BLOC1S2Q6QNY1 142 aa22■■□□□ 1.11
LTBP3-202ENST00000322147 MYD88Q99836 296 aa22■■□□□ 1.11
LTBP3-202ENST00000322147 NUCB1Q02818 461 aa22■■□□□ 1.11
LTBP3-202ENST00000322147 NUTM2BA6NNL0 878 aaPredicted RBP21.99■■□□□ 1.11
LTBP3-202ENST00000322147 NUTM2EB1AL46 878 aaPredicted RBP21.99■■□□□ 1.11
LTBP3-202ENST00000322147 GUCY1B3Q02153 619 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms