RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 MARCH6O60337 910 aa19.75■□□□□ 0.75
CLIP4-201ENST00000320081 FLIIQ13045 1269 aa19.75■□□□□ 0.75
CLIP4-201ENST00000320081 TRIM29Q14134 588 aa19.75■□□□□ 0.75
CLIP4-201ENST00000320081 CAMK4Q16566 473 aa19.75■□□□□ 0.75
CLIP4-201ENST00000320081 DHX16O60231 1041 aaKnown RBP19.75■□□□□ 0.75
CLIP4-201ENST00000320081 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
CLIP4-201ENST00000320081 RBM27Q9P2N5 1060 aaKnown RBP19.74■□□□□ 0.75
CLIP4-201ENST00000320081 POLKQ9UBT6 870 aa19.74■□□□□ 0.75
CLIP4-201ENST00000320081 PZPP20742 1482 aa19.74■□□□□ 0.75
CLIP4-201ENST00000320081 ACEP12821 1306 aa19.74■□□□□ 0.75
CLIP4-201ENST00000320081 CABP4P57796 275 aa19.73■□□□□ 0.75
CLIP4-201ENST00000320081 NINLQ9Y2I6 1382 aa19.73■□□□□ 0.75
CLIP4-201ENST00000320081 TATP17735 454 aaPredicted RBP19.73■□□□□ 0.75
CLIP4-201ENST00000320081 TSPY26PQ9H489 355 aa19.73■□□□□ 0.75
CLIP4-201ENST00000320081 PRDM11Q9NQV5 511 aa19.73■□□□□ 0.75
CLIP4-201ENST00000320081 MBD3O95983 291 aa19.72■□□□□ 0.75
CLIP4-201ENST00000320081 PI4KAP2A4QPH2 592 aa19.72■□□□□ 0.75
CLIP4-201ENST00000320081 PI4KAP1Q8N8J0 262 aa19.72■□□□□ 0.75
CLIP4-201ENST00000320081 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
CLIP4-201ENST00000320081 GUCY1B3Q02153 619 aa19.71■□□□□ 0.75
CLIP4-201ENST00000320081 TTLL5Q6EMB2 1281 aa19.71■□□□□ 0.75
CLIP4-201ENST00000320081 BLOC1S2Q6QNY1 142 aa19.71■□□□□ 0.75
CLIP4-201ENST00000320081 ATP5J2-PTCD1G3V325 749 aa19.71■□□□□ 0.75
CLIP4-201ENST00000320081 PSMA5P28066 241 aa19.7■□□□□ 0.74
CLIP4-201ENST00000320081 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.7■□□□□ 0.74
CLIP4-201ENST00000320081 CCDC34Q96HJ3 373 aa19.7■□□□□ 0.74
CLIP4-201ENST00000320081 PKNOX2Q96KN3 472 aa19.7■□□□□ 0.74
CLIP4-201ENST00000320081 PDRG1Q9NUG6 133 aa19.69■□□□□ 0.74
CLIP4-201ENST00000320081 OTUD7AQ8TE49 926 aaPredicted RBP19.69■□□□□ 0.74
CLIP4-201ENST00000320081 SDSP20132 328 aa19.69■□□□□ 0.74
CLIP4-201ENST00000320081 FAM135AQ9P2D6 1515 aa19.69■□□□□ 0.74
CLIP4-201ENST00000320081 CHRNA2Q15822 529 aa19.68■□□□□ 0.74
CLIP4-201ENST00000320081 PIBF1Q8WXW3 757 aa19.68■□□□□ 0.74
CLIP4-201ENST00000320081 CNNM1Q9NRU3 951 aa19.68■□□□□ 0.74
CLIP4-201ENST00000320081 TFIP11Q9UBB9 837 aaKnown RBP19.68■□□□□ 0.74
CLIP4-201ENST00000320081 ME1P48163 572 aa19.68■□□□□ 0.74
CLIP4-201ENST00000320081 RAB11FIP4Q86YS3 637 aa19.68■□□□□ 0.74
CLIP4-201ENST00000320081 CCDC82Q8N4S0 544 aa19.68■□□□□ 0.74
CLIP4-201ENST00000320081 PPP1R42Q7Z4L9 355 aa19.67■□□□□ 0.74
CLIP4-201ENST00000320081 MCM2P49736 904 aa19.67■□□□□ 0.74
CLIP4-201ENST00000320081 FILIP1Q7Z7B0 1213 aa19.67■□□□□ 0.74
CLIP4-201ENST00000320081 PDILTQ8N807 584 aa19.67■□□□□ 0.74
CLIP4-201ENST00000320081 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
CLIP4-201ENST00000320081 MYD88Q99836 296 aa19.67■□□□□ 0.74
CLIP4-201ENST00000320081 WDR33Q9C0J8 1336 aaKnown RBP19.66■□□□□ 0.74
CLIP4-201ENST00000320081 BMP2KLQ5H9B9 411 aa19.66■□□□□ 0.74
CLIP4-201ENST00000320081 ANKLE2Q86XL3 938 aa19.66■□□□□ 0.74
CLIP4-201ENST00000320081 KINO60870 393 aaKnown RBP19.66■□□□□ 0.74
CLIP4-201ENST00000320081 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
CLIP4-201ENST00000320081 LRRFIP1Q32MZ4 808 aaKnown RBP19.66■□□□□ 0.74
CLIP4-201ENST00000320081 RAPGEF6Q8TEU7 1601 aa19.66■□□□□ 0.74
CLIP4-201ENST00000320081 CWC22Q9HCG8 908 aaKnown RBP19.66■□□□□ 0.74
CLIP4-201ENST00000320081 SNRKQ9NRH2 765 aa19.66■□□□□ 0.74
CLIP4-201ENST00000320081 CFAP65Q6ZU64 1925 aaKnown RBP19.65■□□□□ 0.74
CLIP4-201ENST00000320081 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
CLIP4-201ENST00000320081 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
CLIP4-201ENST00000320081 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
CLIP4-201ENST00000320081 BRPF1P55201 1214 aaPredicted RBP19.65■□□□□ 0.74
CLIP4-201ENST00000320081 MAGI3Q5TCQ9 1506 aa19.65■□□□□ 0.74
CLIP4-201ENST00000320081 SMC2O95347 1197 aa19.65■□□□□ 0.74
CLIP4-201ENST00000320081 KIF1BPQ96EK5 621 aa19.65■□□□□ 0.74
CLIP4-201ENST00000320081 VAMP4O75379 141 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 NUCB1Q02818 461 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 CCDC173Q0VFZ6 552 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 FAM177A1Q8N128 213 aaPredicted RBP19.64■□□□□ 0.73
CLIP4-201ENST00000320081 TPM3P06753 285 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 PCMTD1Q96MG8 357 aaPredicted RBP19.64■□□□□ 0.73
CLIP4-201ENST00000320081 PHF8Q9UPP1 1060 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 RAB11FIP3O75154 756 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
CLIP4-201ENST00000320081 STK38Q15208 465 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 CKAP2LQ8IYA6 745 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 DNAAF4Q8WXU2 420 aa19.64■□□□□ 0.73
CLIP4-201ENST00000320081 IDH1O75874 414 aaKnown RBP19.63■□□□□ 0.73
CLIP4-201ENST00000320081 ZBTB3Q9H5J0 574 aa19.63■□□□□ 0.73
CLIP4-201ENST00000320081 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
CLIP4-201ENST00000320081 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
CLIP4-201ENST00000320081 TNMDQ9H2S6 317 aa19.63■□□□□ 0.73
CLIP4-201ENST00000320081 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
CLIP4-201ENST00000320081 BAG4O95429 457 aaKnown RBP19.62■□□□□ 0.73
CLIP4-201ENST00000320081 KRT85P78386 507 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 UBE2Q2Q8WVN8 375 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 ERICH2A1L162 156 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 TEX14Q8IWB6 1497 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 ABCC11Q96J66 1382 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 PDCP20941 246 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 ZGPATQ8N5A5 531 aaKnown RBP19.62■□□□□ 0.73
CLIP4-201ENST00000320081 LRRC2Q9BYS8 371 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 USP25Q9UHP3 1055 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 TTC39AQ5SRH9 613 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 NECAB1Q8N987 351 aa19.62■□□□□ 0.73
CLIP4-201ENST00000320081 PA2G4Q9UQ80 394 aaKnown RBP19.62■□□□□ 0.73
CLIP4-201ENST00000320081 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
CLIP4-201ENST00000320081 XRCC6P12956 609 aaKnown RBP eCLIP19.61■□□□□ 0.73
CLIP4-201ENST00000320081 BICDL1Q6ZP65 573 aa19.61■□□□□ 0.73
CLIP4-201ENST00000320081 G2E3Q7L622 706 aa19.61■□□□□ 0.73
CLIP4-201ENST00000320081 PLCH2O75038 1416 aa19.61■□□□□ 0.73
CLIP4-201ENST00000320081 CCDC57Q2TAC2 916 aa19.61■□□□□ 0.73
CLIP4-201ENST00000320081 ERC1Q8IUD2 1116 aa19.61■□□□□ 0.73
CLIP4-201ENST00000320081 SPATA32Q96LK8 384 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms