RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 IFNL2Q8IZJ0 200 aa10.66□□□□□ -0.7
PDLIM5-201ENST00000317968 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
PDLIM5-201ENST00000317968 ADGRB2O60241 1585 aa10.66□□□□□ -0.7
PDLIM5-201ENST00000317968 TRIM34Q9BYJ4 488 aa10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 STRN4Q9NRL3 753 aa10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 XPCQ01831 940 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 HOXB7P09629 217 aa10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 HSP90AB4PQ58FF6 505 aa10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■■■□ 20.7
PDLIM5-201ENST00000317968 PTPRCP08575 1304 aa10.65□□□□□ -0.7
PDLIM5-201ENST00000317968 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.71
PDLIM5-201ENST00000317968 COG6Q9Y2V7 657 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 ADAMTSL3P82987 1691 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 AMOTL1Q8IY63 956 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 EYA1Q99502 592 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 RNF123Q5XPI4 1314 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 BECN1Q14457 450 aa10.64□□□□□ -0.71
PDLIM5-201ENST00000317968 PPP1R1BQ9UD71 204 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 MAP3K5Q99683 1374 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 MVPQ14764 893 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 C1orf167Q5SNV9 1468 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 MCCP23508 829 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-201ENST00000317968 ARHGEF25Q86VW2 580 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 OVOS2A0A0J9YW53 1432 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 OVOS2Q6IE36 1432 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 TEX13AQ9BXU3 409 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 ITSN1Q15811 1721 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 CABP4P57796 275 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 KIAA0232Q92628 1395 aa10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 LRRFIP1Q32MZ4 808 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-201ENST00000317968 PLIN1O60240 522 aa10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 CWC22Q9HCG8 908 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 GCC1Q96CN9 775 aa10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 BTBD11A6QL63 1104 aa10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 CTDP1Q9Y5B0 961 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 MYO5BQ9ULV0 1848 aa10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 SLC4A10Q6U841 1118 aa10.61□□□□□ -0.71
PDLIM5-201ENST00000317968 RPAP2Q8IXW5 612 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-201ENST00000317968 RGS3P49796 1198 aa10.6□□□□□ -0.71
PDLIM5-201ENST00000317968 PLEKHG2Q9H7P9 1386 aa10.6□□□□□ -0.71
PDLIM5-201ENST00000317968 SSH1Q8WYL5 1049 aa10.6□□□□□ -0.71
PDLIM5-201ENST00000317968 PLEKHF1Q96S99 279 aa10.6□□□□□ -0.71
PDLIM5-201ENST00000317968 SPATA31A3Q5VYP0 1347 aa10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 BCAR3O75815 825 aa10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
PDLIM5-201ENST00000317968 CHL1O00533 1208 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 EIF2S2P20042 333 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 KIF6Q6ZMV9 814 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 ZNF142P52746 1687 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 MTHFSDQ2M296 383 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 MCM10Q7L590 875 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 HYPKQ9NX55 129 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 IL2RBP14784 551 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 FMNL2Q96PY5 1086 aa10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 C9orf78Q9NZ63 289 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-201ENST00000317968 NCAPD2Q15021 1401 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 PHACTR3Q96KR7 559 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 SRCIN1Q9C0H9 1055 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 ZCRB1Q8TBF4 217 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 PCDH11XQ9BZA7 1347 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 PCDH11YQ9BZA8 1340 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 EXOC5O00471 708 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
PDLIM5-201ENST00000317968 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
PDLIM5-201ENST00000317968 UBTFL1P0CB47 393 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-201ENST00000317968 GNAI2P04899 355 aa10.56□□□□□ -0.72
PDLIM5-201ENST00000317968 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-201ENST00000317968 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
PDLIM5-201ENST00000317968 USP19O94966 1318 aa10.56□□□□□ -0.72
PDLIM5-201ENST00000317968 FAM161AQ3B820 660 aa10.55□□□□□ -0.72
PDLIM5-201ENST00000317968 ZNF335Q9H4Z2 1342 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-201ENST00000317968 RIC3Q7Z5B4 369 aa10.55□□□□□ -0.72
PDLIM5-201ENST00000317968 VAMP4O75379 141 aa10.55□□□□□ -0.72
PDLIM5-201ENST00000317968 MYOM1P52179 1685 aa10.55□□□□□ -0.72
PDLIM5-201ENST00000317968 FBLN1P23142 703 aa10.55□□□□□ -0.72
PDLIM5-201ENST00000317968 STARD3NLO95772 234 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms