RNA–Protein interactions for RNA: ENST00000315781.9

SNAP47-201, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-201ENST00000315781 SNX21Q969T3 373 aa23.29■■□□□ 1.32
SNAP47-201ENST00000315781 MCM4P33991 863 aa23.29■■□□□ 1.32
SNAP47-201ENST00000315781 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
SNAP47-201ENST00000315781 ANKRD44Q8N8A2 993 aa23.28■■□□□ 1.32
SNAP47-201ENST00000315781 PLEKHM2Q8IWE5 1019 aa23.28■■□□□ 1.32
SNAP47-201ENST00000315781 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
SNAP47-201ENST00000315781 PTPRCP08575 1304 aa23.28■■□□□ 1.32
SNAP47-201ENST00000315781 SLC4A2P04920 1241 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 FLT4P35916 1363 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 MSH6P52701 1360 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 TBX22Q9Y458 520 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 SBNO1A3KN83 1393 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 CDC45O75419 566 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 GSPT1P15170 499 aaKnown RBP23.27■■□□□ 1.32
SNAP47-201ENST00000315781 AMPHP49418 695 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 KIF2CQ99661 725 aa23.27■■□□□ 1.32
SNAP47-201ENST00000315781 ATP10DQ9P241 1426 aa23.26■■□□□ 1.31
SNAP47-201ENST00000315781 CEP85Q6P2H3 762 aa23.26■■□□□ 1.31
SNAP47-201ENST00000315781 TSPYL4Q9UJ04 414 aa23.26■■□□□ 1.31
SNAP47-201ENST00000315781 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
SNAP47-201ENST00000315781 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
SNAP47-201ENST00000315781 NCOA3Q9Y6Q9 1424 aa23.25■■□□□ 1.31
SNAP47-201ENST00000315781 C16orf71Q8IYS4 520 aaPredicted RBP23.25■■□□□ 1.31
SNAP47-201ENST00000315781 MEIS3Q99687 375 aa23.25■■□□□ 1.31
SNAP47-201ENST00000315781 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
SNAP47-201ENST00000315781 EYA1Q99502 592 aa23.23■■□□□ 1.31
SNAP47-201ENST00000315781 SLIT1O75093 1534 aa23.23■■□□□ 1.31
SNAP47-201ENST00000315781 ARHGAP23Q9P227 1491 aa23.23■■□□□ 1.31
SNAP47-201ENST00000315781 DIP2AQ14689 1571 aa23.22■■□□□ 1.31
SNAP47-201ENST00000315781 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
SNAP47-201ENST00000315781 APBB1O00213 710 aa23.21■■□□□ 1.31
SNAP47-201ENST00000315781 DDIT3P35638 169 aa23.21■■□□□ 1.31
SNAP47-201ENST00000315781 TTC22Q5TAA0 569 aa23.21■■□□□ 1.31
SNAP47-201ENST00000315781 KDRP35968 1356 aa23.21■■□□□ 1.31
SNAP47-201ENST00000315781 FMN2Q9NZ56 1722 aa23.21■■□□□ 1.31
SNAP47-201ENST00000315781 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.31
SNAP47-201ENST00000315781 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
SNAP47-201ENST00000315781 NLRP6P59044 892 aa23.2■■□□□ 1.3
SNAP47-201ENST00000315781 G2E3Q7L622 706 aa23.2■■□□□ 1.3
SNAP47-201ENST00000315781 OTUD7AQ8TE49 926 aaPredicted RBP23.2■■□□□ 1.3
SNAP47-201ENST00000315781 CEP170BQ9Y4F5 1589 aaPredicted RBP23.2■■□□□ 1.3
SNAP47-201ENST00000315781 SLC4A10Q6U841 1118 aa23.2■■□□□ 1.3
SNAP47-201ENST00000315781 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
SNAP47-201ENST00000315781 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
SNAP47-201ENST00000315781 RBM42Q9BTD8 480 aaKnown RBP23.2■■□□□ 1.3
SNAP47-201ENST00000315781 RGPD8O14715 1765 aaPredicted RBP23.19■■□□□ 1.3
SNAP47-201ENST00000315781 F6X3S4 739 aa23.19■■□□□ 1.3
SNAP47-201ENST00000315781 SMARCA5O60264 1052 aaPredicted RBP23.19■■□□□ 1.3
SNAP47-201ENST00000315781 NUTM2GQ5VZR2 741 aa23.19■■□□□ 1.3
SNAP47-201ENST00000315781 GZF1Q9H116 711 aaPredicted RBP23.18■■□□□ 1.3
SNAP47-201ENST00000315781 HSP90AA1P07900 732 aaKnown RBP23.18■■□□□ 1.3
SNAP47-201ENST00000315781 PIK3C2AO00443 1686 aa23.17■■□□□ 1.3
SNAP47-201ENST00000315781 TRAK2O60296 914 aa23.16■■□□□ 1.3
SNAP47-201ENST00000315781 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
SNAP47-201ENST00000315781 K7ELQ4 463 aaPredicted RBP23.15■■□□□ 1.3
SNAP47-201ENST00000315781 L1TD1Q5T7N2 865 aaKnown RBP23.15■■□□□ 1.3
SNAP47-201ENST00000315781 CCT4P50991 539 aaKnown RBP23.15■■□□□ 1.3
SNAP47-201ENST00000315781 CIZ1Q9ULV3 898 aaPredicted RBP23.15■■□□□ 1.3
SNAP47-201ENST00000315781 DDX11L8A8MPP1 907 aa23.14■■□□□ 1.3
SNAP47-201ENST00000315781 EIF5BO60841 1220 aaKnown RBP23.14■■□□□ 1.29
SNAP47-201ENST00000315781 HMMRO75330 724 aa23.14■■□□□ 1.29
SNAP47-201ENST00000315781 KCNA6P17658 529 aa23.14■■□□□ 1.29
SNAP47-201ENST00000315781 TNPO1Q92973 898 aaKnown RBP23.14■■□□□ 1.29
SNAP47-201ENST00000315781 STK31Q9BXU1 1019 aa23.14■■□□□ 1.29
SNAP47-201ENST00000315781 HOXC9P31274 260 aa23.13■■□□□ 1.29
SNAP47-201ENST00000315781 ARXQ96QS3 562 aa23.13■■□□□ 1.29
SNAP47-201ENST00000315781 SDSP20132 328 aa23.13■■□□□ 1.29
SNAP47-201ENST00000315781 GNAT3A8MTJ3 354 aa23.12■■□□□ 1.29
SNAP47-201ENST00000315781 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
SNAP47-201ENST00000315781 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
SNAP47-201ENST00000315781 LTV1Q96GA3 475 aaPredicted RBP23.11■■□□□ 1.29
SNAP47-201ENST00000315781 ANKARQ7Z5J8 1434 aa23.11■■□□□ 1.29
SNAP47-201ENST00000315781 GOLGA6L3A6NEY3 463 aa23.1■■□□□ 1.29
SNAP47-201ENST00000315781 RAB3GAP1Q15042 981 aa23.1■■□□□ 1.29
SNAP47-201ENST00000315781 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
SNAP47-201ENST00000315781 CASC1Q6TDU7 716 aa23.09■■□□□ 1.29
SNAP47-201ENST00000315781 USP26Q9BXU7 913 aa23.09■■□□□ 1.29
SNAP47-201ENST00000315781 XRN1Q8IZH2 1706 aaKnown RBP23.09■■□□□ 1.29
SNAP47-201ENST00000315781 GNAI2P04899 355 aa23.09■■□□□ 1.29
SNAP47-201ENST00000315781 FLIIQ13045 1269 aa23.08■■□□□ 1.29
SNAP47-201ENST00000315781 FKBP5Q13451 457 aaPredicted RBP23.08■■□□□ 1.29
SNAP47-201ENST00000315781 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.29
SNAP47-201ENST00000315781 FER1L4A9Z1Z3 1794 aa23.08■■□□□ 1.29
SNAP47-201ENST00000315781 RABEP1Q15276 862 aa23.08■■□□□ 1.29
SNAP47-201ENST00000315781 C14orf37Q86TY3 774 aa23.08■■□□□ 1.29
SNAP47-201ENST00000315781 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
SNAP47-201ENST00000315781 FSD2A1L4K1 749 aa23.06■■□□□ 1.28
SNAP47-201ENST00000315781 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
SNAP47-201ENST00000315781 MAP3K5Q99683 1374 aa23.06■■□□□ 1.28
SNAP47-201ENST00000315781 EXOC6BQ9Y2D4 811 aa23.05■■□□□ 1.28
SNAP47-201ENST00000315781 NWD1Q149M9 1564 aa23.05■■□□□ 1.28
SNAP47-201ENST00000315781 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
SNAP47-201ENST00000315781 USHBP1Q8N6Y0 703 aa23.04■■□□□ 1.28
SNAP47-201ENST00000315781 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
SNAP47-201ENST00000315781 PDE1AP54750 535 aa23.03■■□□□ 1.28
SNAP47-201ENST00000315781 TAF7Q15545 349 aaPredicted RBP23.03■■□□□ 1.28
SNAP47-201ENST00000315781 GNAI3P08754 354 aa23.03■■□□□ 1.28
SNAP47-201ENST00000315781 MARF1Q9Y4F3 1742 aaKnown RBP23.02■■□□□ 1.28
SNAP47-201ENST00000315781 OSBPL3Q9H4L5 887 aa23.01■■□□□ 1.27
SNAP47-201ENST00000315781 REC8O95072 547 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms