RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 HOXC9P31274 260 aa18.69■□□□□ 0.58
RPUSD2-201ENST00000315616 ABCC4O15439 1325 aa18.68■□□□□ 0.58
RPUSD2-201ENST00000315616 USP54Q70EL1 1684 aa18.68■□□□□ 0.58
RPUSD2-201ENST00000315616 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
RPUSD2-201ENST00000315616 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
RPUSD2-201ENST00000315616 RTN4Q9NQC3 1192 aaKnown RBP18.66■□□□□ 0.58
RPUSD2-201ENST00000315616 SLC4A3P48751 1232 aa18.65■□□□□ 0.58
RPUSD2-201ENST00000315616 C14orf37Q86TY3 774 aa18.65■□□□□ 0.58
RPUSD2-201ENST00000315616 KIF24Q5T7B8 1368 aa18.65■□□□□ 0.58
RPUSD2-201ENST00000315616 KIAA0232Q92628 1395 aa18.65■□□□□ 0.58
RPUSD2-201ENST00000315616 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
RPUSD2-201ENST00000315616 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.58
RPUSD2-201ENST00000315616 NWD1Q149M9 1564 aa18.64■□□□□ 0.58
RPUSD2-201ENST00000315616 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
RPUSD2-201ENST00000315616 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
RPUSD2-201ENST00000315616 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
RPUSD2-201ENST00000315616 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
RPUSD2-201ENST00000315616 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
RPUSD2-201ENST00000315616 SIRT2Q8IXJ6 389 aa18.62■□□□□ 0.57
RPUSD2-201ENST00000315616 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
RPUSD2-201ENST00000315616 NUCB1Q02818 461 aa18.61■□□□□ 0.57
RPUSD2-201ENST00000315616 PSME1Q06323 249 aa18.61■□□□□ 0.57
RPUSD2-201ENST00000315616 LTN1O94822 1766 aa18.6■□□□□ 0.57
RPUSD2-201ENST00000315616 CHMP4BQ9H444 224 aaKnown RBP18.6■□□□□ 0.57
RPUSD2-201ENST00000315616 RGS12O14924 1447 aa18.6■□□□□ 0.57
RPUSD2-201ENST00000315616 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
RPUSD2-201ENST00000315616 ORAI2Q96SN7 254 aa18.6■□□□□ 0.57
RPUSD2-201ENST00000315616 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
RPUSD2-201ENST00000315616 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
RPUSD2-201ENST00000315616 HSPA2P54652 639 aa18.58■□□□□ 0.56
RPUSD2-201ENST00000315616 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
RPUSD2-201ENST00000315616 NFAT5O94916 1531 aa18.58■□□□□ 0.56
RPUSD2-201ENST00000315616 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
RPUSD2-201ENST00000315616 USHBP1Q8N6Y0 703 aa18.57■□□□□ 0.56
RPUSD2-201ENST00000315616 IP6K1Q92551 441 aa18.57■□□□□ 0.56
RPUSD2-201ENST00000315616 LNPKQ9C0E8 428 aa18.57■□□□□ 0.56
RPUSD2-201ENST00000315616 GNAT3A8MTJ3 354 aa18.57■□□□□ 0.56
RPUSD2-201ENST00000315616 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
RPUSD2-201ENST00000315616 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
RPUSD2-201ENST00000315616 IL17REQ8NFR9 667 aa18.56■□□□□ 0.56
RPUSD2-201ENST00000315616 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.56■□□□□ 0.56
RPUSD2-201ENST00000315616 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
RPUSD2-201ENST00000315616 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
RPUSD2-201ENST00000315616 GCC1Q96CN9 775 aa18.55■□□□□ 0.56
RPUSD2-201ENST00000315616 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 PTPRCP08575 1304 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 MSH6P52701 1360 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 ANKRD45Q5TZF3 282 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 G2E3Q7L622 706 aa18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 DAXXQ9UER7 740 aaPredicted RBP18.54■□□□□ 0.56
RPUSD2-201ENST00000315616 GSE1Q14687 1217 aa18.53■□□□□ 0.56
RPUSD2-201ENST00000315616 TBC1D32Q96NH3 1257 aa18.53■□□□□ 0.56
RPUSD2-201ENST00000315616 MAP3K5Q99683 1374 aa18.52■□□□□ 0.56
RPUSD2-201ENST00000315616 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.56
RPUSD2-201ENST00000315616 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.55
RPUSD2-201ENST00000315616 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
RPUSD2-201ENST00000315616 RGPD2P0DJD1 1756 aa18.51■□□□□ 0.55
RPUSD2-201ENST00000315616 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
RPUSD2-201ENST00000315616 GCP02774 474 aa18.5■□□□□ 0.55
RPUSD2-201ENST00000315616 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
RPUSD2-201ENST00000315616 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
RPUSD2-201ENST00000315616 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
RPUSD2-201ENST00000315616 F6X3S4 739 aa18.48■□□□□ 0.55
RPUSD2-201ENST00000315616 ATP10DQ9P241 1426 aa18.48■□□□□ 0.55
RPUSD2-201ENST00000315616 PHRF1Q9P1Y6 1649 aaKnown RBP18.48■□□□□ 0.55
RPUSD2-201ENST00000315616 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
RPUSD2-201ENST00000315616 MEIS3Q99687 375 aa18.48■□□□□ 0.55
RPUSD2-201ENST00000315616 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
RPUSD2-201ENST00000315616 ANKRD44Q8N8A2 993 aa18.47■□□□□ 0.55
RPUSD2-201ENST00000315616 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
RPUSD2-201ENST00000315616 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 KRT28Q7Z3Y7 464 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 C19orf44Q9H6X5 657 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 CEP85Q6P2H3 762 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 SLIT3O75094 1523 aa18.46■□□□□ 0.55
RPUSD2-201ENST00000315616 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.54
RPUSD2-201ENST00000315616 TRPM3Q9HCF6 1732 aaPredicted RBP18.46■□□□□ 0.54
RPUSD2-201ENST00000315616 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
RPUSD2-201ENST00000315616 SLC4A10Q6U841 1118 aa18.45■□□□□ 0.54
RPUSD2-201ENST00000315616 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
RPUSD2-201ENST00000315616 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
RPUSD2-201ENST00000315616 RPAP2Q8IXW5 612 aaPredicted RBP18.45■□□□□ 0.54
RPUSD2-201ENST00000315616 STK31Q9BXU1 1019 aa18.45■□□□□ 0.54
RPUSD2-201ENST00000315616 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
RPUSD2-201ENST00000315616 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
RPUSD2-201ENST00000315616 AXIN2Q9Y2T1 843 aa18.44■□□□□ 0.54
RPUSD2-201ENST00000315616 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
RPUSD2-201ENST00000315616 FLIIQ13045 1269 aa18.42■□□□□ 0.54
RPUSD2-201ENST00000315616 STRCP1A6NGW2 1772 aa18.42■□□□□ 0.54
RPUSD2-201ENST00000315616 CCT4P50991 539 aaKnown RBP18.42■□□□□ 0.54
RPUSD2-201ENST00000315616 NFKBIBQ15653 356 aa18.42■□□□□ 0.54
RPUSD2-201ENST00000315616 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
RPUSD2-201ENST00000315616 BECN1Q14457 450 aa18.41■□□□□ 0.54
RPUSD2-201ENST00000315616 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
RPUSD2-201ENST00000315616 PLEKHM2Q8IWE5 1019 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms