RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
MKS1-201ENST00000313863 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
MKS1-201ENST00000313863 ATP10DQ9P241 1426 aa17.04■□□□□ 0.32
MKS1-201ENST00000313863 TPM2P07951 284 aa17.03■□□□□ 0.32
MKS1-201ENST00000313863 NME9Q86XW9 330 aa17.03■□□□□ 0.32
MKS1-201ENST00000313863 HMMRO75330 724 aa17.03■□□□□ 0.32
MKS1-201ENST00000313863 WAPLQ7Z5K2 1190 aa17.03■□□□□ 0.32
MKS1-201ENST00000313863 SIRT1Q96EB6 747 aa17.03■□□□□ 0.32
MKS1-201ENST00000313863 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.32
MKS1-201ENST00000313863 FBLN1P23142 703 aa17.02■□□□□ 0.32
MKS1-201ENST00000313863 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
MKS1-201ENST00000313863 ERBB4Q15303 1308 aa17.01■□□□□ 0.31
MKS1-201ENST00000313863 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
MKS1-201ENST00000313863 ZSCAN30Q86W11 494 aa17.01■□□□□ 0.31
MKS1-201ENST00000313863 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
MKS1-201ENST00000313863 MCTP1Q6DN14 999 aa17■□□□□ 0.31
MKS1-201ENST00000313863 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
MKS1-201ENST00000313863 RTL1A6NKG5 1358 aa17■□□□□ 0.31
MKS1-201ENST00000313863 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
MKS1-201ENST00000313863 RGS12O14924 1447 aa16.99■□□□□ 0.31
MKS1-201ENST00000313863 CHL1O00533 1208 aa16.99■□□□□ 0.31
MKS1-201ENST00000313863 SDSP20132 328 aa16.99■□□□□ 0.31
MKS1-201ENST00000313863 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
MKS1-201ENST00000313863 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
MKS1-201ENST00000313863 TECPR2O15040 1411 aa16.99■□□□□ 0.31
MKS1-201ENST00000313863 CPS1P31327 1500 aa16.98■□□□□ 0.31
MKS1-201ENST00000313863 ERC2O15083 957 aa16.98■□□□□ 0.31
MKS1-201ENST00000313863 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
MKS1-201ENST00000313863 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
MKS1-201ENST00000313863 MCM2P49736 904 aa16.98■□□□□ 0.31
MKS1-201ENST00000313863 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
MKS1-201ENST00000313863 MSH6P52701 1360 aa16.97■□□□□ 0.31
MKS1-201ENST00000313863 OSBPL3Q9H4L5 887 aa16.97■□□□□ 0.31
MKS1-201ENST00000313863 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
MKS1-201ENST00000313863 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
MKS1-201ENST00000313863 ZSCAN23Q3MJ62 389 aa16.96■□□□□ 0.31
MKS1-201ENST00000313863 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.96■□□□□ 0.31
MKS1-201ENST00000313863 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
MKS1-201ENST00000313863 HDGFP51858 240 aaKnown RBP16.95■□□□□ 0.3
MKS1-201ENST00000313863 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
MKS1-201ENST00000313863 CAVIN1Q6NZI2 390 aaKnown RBP16.95■□□□□ 0.3
MKS1-201ENST00000313863 CCT4P50991 539 aaKnown RBP16.95■□□□□ 0.3
MKS1-201ENST00000313863 TERF1P54274 439 aa16.95■□□□□ 0.3
MKS1-201ENST00000313863 MCCP23508 829 aa16.94■□□□□ 0.3
MKS1-201ENST00000313863 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
MKS1-201ENST00000313863 RGPD1P0DJD0 1748 aa16.94■□□□□ 0.3
MKS1-201ENST00000313863 MBD3O95983 291 aa16.93■□□□□ 0.3
MKS1-201ENST00000313863 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
MKS1-201ENST00000313863 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
MKS1-201ENST00000313863 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
MKS1-201ENST00000313863 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
MKS1-201ENST00000313863 PKNOX2Q96KN3 472 aa16.93■□□□□ 0.3
MKS1-201ENST00000313863 TTC21BQ7Z4L5 1316 aa16.93■□□□□ 0.3
MKS1-201ENST00000313863 OFD1O75665 1012 aa16.92■□□□□ 0.3
MKS1-201ENST00000313863 TUBGCP6Q96RT7 1819 aa16.92■□□□□ 0.3
MKS1-201ENST00000313863 OTUD7AQ8TE49 926 aaPredicted RBP16.92■□□□□ 0.3
MKS1-201ENST00000313863 MEIS3Q99687 375 aa16.92■□□□□ 0.3
MKS1-201ENST00000313863 ARHGEF10O15013 1369 aa16.91■□□□□ 0.3
MKS1-201ENST00000313863 METP08581 1390 aa16.91■□□□□ 0.3
MKS1-201ENST00000313863 SMARCA5O60264 1052 aaPredicted RBP16.9■□□□□ 0.3
MKS1-201ENST00000313863 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
MKS1-201ENST00000313863 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 SSH2Q76I76 1423 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 MCM5P33992 734 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 PDE1AP54750 535 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 ANAPC15P60006 121 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 PDLIM2Q96JY6 352 aa16.9■□□□□ 0.3
MKS1-201ENST00000313863 CRB1P82279 1406 aa16.89■□□□□ 0.3
MKS1-201ENST00000313863 LRSAM1Q6UWE0 723 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 OVOS2A0A0J9YW53 1432 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 OVOS2Q6IE36 1432 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 APBB1O00213 710 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 GNAI2P04899 355 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 MCM10Q7L590 875 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.29
MKS1-201ENST00000313863 NOL7Q9UMY1 257 aaKnown RBP16.89■□□□□ 0.29
MKS1-201ENST00000313863 DIP2BQ9P265 1576 aa16.88■□□□□ 0.29
MKS1-201ENST00000313863 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
MKS1-201ENST00000313863 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
MKS1-201ENST00000313863 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
MKS1-201ENST00000313863 INTS4Q96HW7 963 aaKnown RBP16.88■□□□□ 0.29
MKS1-201ENST00000313863 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
MKS1-201ENST00000313863 N4BP2Q86UW6 1770 aaPredicted RBP16.88■□□□□ 0.29
MKS1-201ENST00000313863 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
MKS1-201ENST00000313863 RBSNQ9H1K0 784 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 ZNF500O60304 480 aaPredicted RBP16.87■□□□□ 0.29
MKS1-201ENST00000313863 GNAI3P08754 354 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 NEK4P51957 841 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 PKP1Q13835 747 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 GPT2Q8TD30 523 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
MKS1-201ENST00000313863 CUL4AQ13619 759 aa16.86■□□□□ 0.29
MKS1-201ENST00000313863 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
MKS1-201ENST00000313863 ESYT1Q9BSJ8 1104 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms