RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 IGSF1Q8N6C5 1336 aa23.21■■□□□ 1.31
PUF60-201ENST00000313352 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
PUF60-201ENST00000313352 RGPD1P0DJD0 1748 aa23.21■■□□□ 1.31
PUF60-201ENST00000313352 TATP17735 454 aaPredicted RBP23.2■■□□□ 1.3
PUF60-201ENST00000313352 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
PUF60-201ENST00000313352 SF3B2Q13435 895 aaKnown RBP23.2■■□□□ 1.3
PUF60-201ENST00000313352 COL3A1P02461 1466 aaPredicted RBP23.18■■□□□ 1.3
PUF60-201ENST00000313352 APBA3O96018 575 aa23.17■■□□□ 1.3
PUF60-201ENST00000313352 BCL9O00512 1426 aa23.16■■□□□ 1.3
PUF60-201ENST00000313352 CYP27B1O15528 508 aa23.16■■□□□ 1.3
PUF60-201ENST00000313352 EZH2Q15910 746 aaKnown RBP23.16■■□□□ 1.3
PUF60-201ENST00000313352 SULT6B1Q6IMI4 303 aa23.16■■□□□ 1.3
PUF60-201ENST00000313352 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
PUF60-201ENST00000313352 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
PUF60-201ENST00000313352 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.29
PUF60-201ENST00000313352 DIAPH1O60610 1272 aaKnown RBP23.14■■□□□ 1.29
PUF60-201ENST00000313352 HMOX1P09601 288 aa23.14■■□□□ 1.29
PUF60-201ENST00000313352 BAG6P46379 1132 aa23.14■■□□□ 1.29
PUF60-201ENST00000313352 BCL11BQ9C0K0 894 aaPredicted RBP23.12■■□□□ 1.29
PUF60-201ENST00000313352 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
PUF60-201ENST00000313352 KAT6BQ8WYB5 2073 aa23.11■■□□□ 1.29
PUF60-201ENST00000313352 DOT1LQ8TEK3 1739 aa23.1■■□□□ 1.29
PUF60-201ENST00000313352 NHSQ6T4R5 1651 aa23.1■■□□□ 1.29
PUF60-201ENST00000313352 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
PUF60-201ENST00000313352 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
PUF60-201ENST00000313352 KDRP35968 1356 aa23.09■■□□□ 1.29
PUF60-201ENST00000313352 U2SURPO15042 1029 aaKnown RBP23.09■■□□□ 1.29
PUF60-201ENST00000313352 PRIM1P49642 420 aaKnown RBP23.09■■□□□ 1.29
PUF60-201ENST00000313352 SYTL4Q96C24 671 aaPredicted RBP23.08■■□□□ 1.29
PUF60-201ENST00000313352 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
PUF60-201ENST00000313352 TOGARAM1Q9Y4F4 1720 aa23.07■■□□□ 1.28
PUF60-201ENST00000313352 PROM2Q8N271 834 aa23.06■■□□□ 1.28
PUF60-201ENST00000313352 BTAF1O14981 1849 aa23.06■■□□□ 1.28
PUF60-201ENST00000313352 PHKG2P15735 406 aa23.05■■□□□ 1.28
PUF60-201ENST00000313352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.04■■□□□ 1.28
PUF60-201ENST00000313352 CFAP53Q96M91 514 aa23.03■■□□□ 1.28
PUF60-201ENST00000313352 PLSCR1O15162 318 aa23.02■■□□□ 1.28
PUF60-201ENST00000313352 RALBP1Q15311 655 aa23.02■■□□□ 1.28
PUF60-201ENST00000313352 RREB1Q92766 1687 aa23.02■■□□□ 1.28
PUF60-201ENST00000313352 NKX1-1Q15270 411 aaPredicted RBP23.01■■□□□ 1.27
PUF60-201ENST00000313352 PLEKHO1Q53GL0 409 aaPredicted RBP23.01■■□□□ 1.27
PUF60-201ENST00000313352 ZNF530Q6P9A1 599 aaPredicted RBP23.01■■□□□ 1.27
PUF60-201ENST00000313352 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
PUF60-201ENST00000313352 NUP188Q5SRE5 1749 aa23■■□□□ 1.27
PUF60-201ENST00000313352 MPRIPQ6WCQ1 1025 aa23■■□□□ 1.27
PUF60-201ENST00000313352 PRKRIP1Q9H875 184 aaPredicted RBP23■■□□□ 1.27
PUF60-201ENST00000313352 KCNQ4P56696 695 aa22.99■■□□□ 1.27
PUF60-201ENST00000313352 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
PUF60-201ENST00000313352 ITGB4P16144 1822 aa22.98■■□□□ 1.27
PUF60-201ENST00000313352 PSDA5PKW4 1024 aaPredicted RBP22.98■■□□□ 1.27
PUF60-201ENST00000313352 U2AF1L5P0DN76 240 aaPredicted RBP22.98■■□□□ 1.27
PUF60-201ENST00000313352 U2AF1Q01081 240 aaKnown RBP eCLIP22.98■■□□□ 1.27
PUF60-201ENST00000313352 TXNRD1Q16881 649 aa22.98■■□□□ 1.27
PUF60-201ENST00000313352 AMOTQ4VCS5 1084 aa22.98■■□□□ 1.27
PUF60-201ENST00000313352 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
PUF60-201ENST00000313352 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
PUF60-201ENST00000313352 RSPH6AQ9H0K4 717 aa22.97■■□□□ 1.27
PUF60-201ENST00000313352 MYBBP1AQ9BQG0 1328 aaKnown RBP22.96■■□□□ 1.27
PUF60-201ENST00000313352 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
PUF60-201ENST00000313352 PIGBQ92521 554 aa22.96■■□□□ 1.27
PUF60-201ENST00000313352 RGPD3A6NKT7 1758 aaPredicted RBP22.95■■□□□ 1.27
PUF60-201ENST00000313352 RGPD4Q7Z3J3 1758 aa22.95■■□□□ 1.27
PUF60-201ENST00000313352 LRRC4BQ9NT99 713 aa22.95■■□□□ 1.26
PUF60-201ENST00000313352 PLEKHG2Q9H7P9 1386 aa22.95■■□□□ 1.26
PUF60-201ENST00000313352 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
PUF60-201ENST00000313352 NUDCQ9Y266 331 aa22.94■■□□□ 1.26
PUF60-201ENST00000313352 SRCAPQ6ZRS2 3230 aa22.94■■□□□ 1.26
PUF60-201ENST00000313352 R3HDM1Q15032 1099 aaKnown RBP22.93■■□□□ 1.26
PUF60-201ENST00000313352 LGR6Q9HBX8 967 aa22.93■■□□□ 1.26
PUF60-201ENST00000313352 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
PUF60-201ENST00000313352 DCAF5Q96JK2 942 aa22.91■■□□□ 1.26
PUF60-201ENST00000313352 ASAP1Q9ULH1 1129 aa22.9■■□□□ 1.26
PUF60-201ENST00000313352 CCDC184Q52MB2 194 aa22.89■■□□□ 1.26
PUF60-201ENST00000313352 AKAP4Q5JQC9 854 aa22.89■■□□□ 1.26
PUF60-201ENST00000313352 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.26
PUF60-201ENST00000313352 LY75O60449 1722 aa22.89■■□□□ 1.26
PUF60-201ENST00000313352 FCHSD2O94868 740 aa22.87■■□□□ 1.25
PUF60-201ENST00000313352 PALLDQ8WX93 1383 aa22.87■■□□□ 1.25
PUF60-201ENST00000313352 HSP90AB1P08238 724 aaKnown RBP22.87■■□□□ 1.25
PUF60-201ENST00000313352 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
PUF60-201ENST00000313352 PDGFDQ9GZP0 370 aaPredicted RBP22.87■■□□□ 1.25
PUF60-201ENST00000313352 SCN11AQ9UI33 1791 aa22.86■■□□□ 1.25
PUF60-201ENST00000313352 ATG3Q9NT62 314 aa22.86■■□□□ 1.25
PUF60-201ENST00000313352 VIRMAQ69YN4 1812 aaKnown RBP22.86■■□□□ 1.25
PUF60-201ENST00000313352 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
PUF60-201ENST00000313352 RNMTO43148 476 aaKnown RBP22.85■■□□□ 1.25
PUF60-201ENST00000313352 CABP4P57796 275 aa22.85■■□□□ 1.25
PUF60-201ENST00000313352 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
PUF60-201ENST00000313352 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
PUF60-201ENST00000313352 ZNF827Q17R98 1081 aa22.85■■□□□ 1.25
PUF60-201ENST00000313352 CCNL1Q9UK58 526 aaPredicted RBP22.84■■□□□ 1.25
PUF60-201ENST00000313352 NBPF14Q5TI25 921 aa22.83■■□□□ 1.25
PUF60-201ENST00000313352 IL17REQ8NFR9 667 aa22.83■■□□□ 1.25
PUF60-201ENST00000313352 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
PUF60-201ENST00000313352 ADAMTS7Q9UKP4 1686 aa22.82■■□□□ 1.24
PUF60-201ENST00000313352 MAP3K5Q99683 1374 aa22.82■■□□□ 1.24
PUF60-201ENST00000313352 GNAT3A8MTJ3 354 aa22.8■■□□□ 1.24
PUF60-201ENST00000313352 DCTN1Q14203 1278 aa22.8■■□□□ 1.24
PUF60-201ENST00000313352 SLC15A2Q16348 729 aa22.8■■□□□ 1.24
PUF60-201ENST00000313352 SLC27A3Q5K4L6 730 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms