RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CYP2E1P05181 493 aaPredicted RBP22.09■■□□□ 1.13
SPSB4-201ENST00000310546 ATP2B3Q16720 1220 aa22.09■■□□□ 1.13
SPSB4-201ENST00000310546 CFAP53Q96M91 514 aa22.09■■□□□ 1.13
SPSB4-201ENST00000310546 CDK19Q9BWU1 502 aa22.09■■□□□ 1.13
SPSB4-201ENST00000310546 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
SPSB4-201ENST00000310546 TNRQ92752 1358 aa22.09■■□□□ 1.13
SPSB4-201ENST00000310546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.13
SPSB4-201ENST00000310546 GTPBP4Q9BZE4 634 aaKnown RBP22.08■■□□□ 1.13
SPSB4-201ENST00000310546 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
SPSB4-201ENST00000310546 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
SPSB4-201ENST00000310546 YTHDC2Q9H6S0 1430 aaKnown RBP22.08■■□□□ 1.12
SPSB4-201ENST00000310546 SPDYE4A6NLX3 237 aa22.08■■□□□ 1.12
SPSB4-201ENST00000310546 RABEP1Q15276 862 aa22.08■■□□□ 1.12
SPSB4-201ENST00000310546 CT47B1P0C2W7 299 aaPredicted RBP22.07■■□□□ 1.12
SPSB4-201ENST00000310546 METP08581 1390 aa22.07■■□□□ 1.12
SPSB4-201ENST00000310546 PDE4CQ08493 712 aa22.07■■□□□ 1.12
SPSB4-201ENST00000310546 IGSF3O75054 1194 aa22.06■■□□□ 1.12
SPSB4-201ENST00000310546 KIF20AO95235 890 aa22.06■■□□□ 1.12
SPSB4-201ENST00000310546 CDC45O75419 566 aa22.06■■□□□ 1.12
SPSB4-201ENST00000310546 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
SPSB4-201ENST00000310546 C17orf53Q8N3J3 647 aaPredicted RBP22.05■■□□□ 1.12
SPSB4-201ENST00000310546 HMGN5P82970 282 aaKnown RBP22.04■■□□□ 1.12
SPSB4-201ENST00000310546 PRIMPOLQ96LW4 560 aa22.04■■□□□ 1.12
SPSB4-201ENST00000310546 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
SPSB4-201ENST00000310546 ZDHHC9Q9Y397 364 aa22.03■■□□□ 1.12
SPSB4-201ENST00000310546 KIF3AQ9Y496 699 aa22.03■■□□□ 1.12
SPSB4-201ENST00000310546 LETM1O95202 739 aaPredicted RBP22.02■■□□□ 1.12
SPSB4-201ENST00000310546 GTF2E1P29083 439 aaPredicted RBP22.02■■□□□ 1.12
SPSB4-201ENST00000310546 NOLC1Q14978 699 aaKnown RBP eCLIP22.02■■□□□ 1.12
SPSB4-201ENST00000310546 CWC22Q9HCG8 908 aaKnown RBP22.02■■□□□ 1.12
SPSB4-201ENST00000310546 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
SPSB4-201ENST00000310546 GCC1Q96CN9 775 aa22.01■■□□□ 1.11
SPSB4-201ENST00000310546 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
SPSB4-201ENST00000310546 TSPY26PQ9H489 355 aa22■■□□□ 1.11
SPSB4-201ENST00000310546 TTC12Q9H892 705 aaPredicted RBP22■■□□□ 1.11
SPSB4-201ENST00000310546 SOX12O15370 315 aa22■■□□□ 1.11
SPSB4-201ENST00000310546 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
SPSB4-201ENST00000310546 PIBF1Q8WXW3 757 aa21.99■■□□□ 1.11
SPSB4-201ENST00000310546 ST18O60284 1047 aa21.98■■□□□ 1.11
SPSB4-201ENST00000310546 GSPT1P15170 499 aaKnown RBP21.98■■□□□ 1.11
SPSB4-201ENST00000310546 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
SPSB4-201ENST00000310546 FOXD4L6Q3SYB3 417 aaPredicted RBP21.98■■□□□ 1.11
SPSB4-201ENST00000310546 FOXD4L3Q6VB84 417 aaPredicted RBP21.98■■□□□ 1.11
SPSB4-201ENST00000310546 BCL2L12Q9HB09 334 aa21.98■■□□□ 1.11
SPSB4-201ENST00000310546 PDCL2Q8N4E4 241 aa21.97■■□□□ 1.11
SPSB4-201ENST00000310546 MBD3O95983 291 aa21.97■■□□□ 1.11
SPSB4-201ENST00000310546 TMPOP42166 694 aaKnown RBP21.97■■□□□ 1.11
SPSB4-201ENST00000310546 GTF2F1P35269 517 aaKnown RBP eCLIP21.96■■□□□ 1.11
SPSB4-201ENST00000310546 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
SPSB4-201ENST00000310546 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
SPSB4-201ENST00000310546 USP26Q9BXU7 913 aa21.96■■□□□ 1.11
SPSB4-201ENST00000310546 USP25Q9UHP3 1055 aa21.96■■□□□ 1.11
SPSB4-201ENST00000310546 ZRANB1Q9UGI0 708 aa21.96■■□□□ 1.11
SPSB4-201ENST00000310546 A0A1W2PP64 1363 aa21.96■■□□□ 1.11
SPSB4-201ENST00000310546 UBR1Q8IWV7 1749 aa21.95■■□□□ 1.1
SPSB4-201ENST00000310546 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.95■■□□□ 1.1
SPSB4-201ENST00000310546 U2AF2P26368 475 aaKnown RBP eCLIP21.95■■□□□ 1.1
SPSB4-201ENST00000310546 TPRNQ4KMQ1 711 aa21.95■■□□□ 1.1
SPSB4-201ENST00000310546 TMEM2Q9UHN6 1383 aa21.94■■□□□ 1.1
SPSB4-201ENST00000310546 USP32Q8NFA0 1604 aa21.94■■□□□ 1.1
SPSB4-201ENST00000310546 ZBTB7BO15156 539 aaPredicted RBP21.94■■□□□ 1.1
SPSB4-201ENST00000310546 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
SPSB4-201ENST00000310546 NRXN3Q9Y4C0 1643 aa21.94■■□□□ 1.1
SPSB4-201ENST00000310546 SIRT2Q8IXJ6 389 aa21.93■■□□□ 1.1
SPSB4-201ENST00000310546 HDGFP51858 240 aaKnown RBP21.93■■□□□ 1.1
SPSB4-201ENST00000310546 SETD1BQ9UPS6 1966 aaKnown RBP21.93■■□□□ 1.1
SPSB4-201ENST00000310546 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
SPSB4-201ENST00000310546 CGNQ9P2M7 1197 aaKnown RBP21.93■■□□□ 1.1
SPSB4-201ENST00000310546 PLCB2Q00722 1185 aa21.92■■□□□ 1.1
SPSB4-201ENST00000310546 CEP170BQ9Y4F5 1589 aaPredicted RBP21.91■■□□□ 1.1
SPSB4-201ENST00000310546 ATAD2Q6PL18 1390 aa21.91■■□□□ 1.1
SPSB4-201ENST00000310546 ZNF771Q7L3S4 317 aaPredicted RBP21.9■■□□□ 1.1
SPSB4-201ENST00000310546 GDPD2Q9HCC8 539 aa21.9■■□□□ 1.1
SPSB4-201ENST00000310546 PLEKHM2Q8IWE5 1019 aa21.9■■□□□ 1.1
SPSB4-201ENST00000310546 SYAP1Q96A49 352 aaPredicted RBP21.9■■□□□ 1.1
SPSB4-201ENST00000310546 FYB1O15117 783 aa21.9■■□□□ 1.1
SPSB4-201ENST00000310546 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
SPSB4-201ENST00000310546 C16orf71Q8IYS4 520 aaPredicted RBP21.9■■□□□ 1.1
SPSB4-201ENST00000310546 ZNF142P52746 1687 aaPredicted RBP21.89■■□□□ 1.1
SPSB4-201ENST00000310546 ADCY5O95622 1261 aa21.89■■□□□ 1.09
SPSB4-201ENST00000310546 AMOTL2Q9Y2J4 779 aa21.89■■□□□ 1.09
SPSB4-201ENST00000310546 INTS3Q68E01 1043 aaKnown RBP21.89■■□□□ 1.09
SPSB4-201ENST00000310546 CD163L1Q9NR16 1453 aa21.88■■□□□ 1.09
SPSB4-201ENST00000310546 CHMP4BQ9H444 224 aaKnown RBP21.88■■□□□ 1.09
SPSB4-201ENST00000310546 TMEM51Q9NW97 253 aa21.88■■□□□ 1.09
SPSB4-201ENST00000310546 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
SPSB4-201ENST00000310546 VGLL3A8MV65 326 aa21.87■■□□□ 1.09
SPSB4-201ENST00000310546 ZBTB22O15209 634 aa21.87■■□□□ 1.09
SPSB4-201ENST00000310546 TERF2IPQ9NYB0 399 aa21.87■■□□□ 1.09
SPSB4-201ENST00000310546 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
SPSB4-201ENST00000310546 NUDT16Q96DE0 195 aaKnown RBP21.87■■□□□ 1.09
SPSB4-201ENST00000310546 CHAF1AQ13111 956 aaPredicted RBP21.86■■□□□ 1.09
SPSB4-201ENST00000310546 NOL8Q76FK4 1167 aaKnown RBP21.86■■□□□ 1.09
SPSB4-201ENST00000310546 PLEKHF1Q96S99 279 aa21.86■■□□□ 1.09
SPSB4-201ENST00000310546 NAP1L2Q9ULW6 460 aaPredicted RBP21.86■■□□□ 1.09
SPSB4-201ENST00000310546 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
SPSB4-201ENST00000310546 DLC1Q96QB1 1528 aa21.86■■□□□ 1.09
SPSB4-201ENST00000310546 RIOK3O14730 519 aaKnown RBP21.86■■□□□ 1.09
SPSB4-201ENST00000310546 TTC22Q5TAA0 569 aa21.86■■□□□ 1.09
SPSB4-201ENST00000310546 THEMISQ8N1K5 641 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms