RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 KCNA6P17658 529 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 K7ELQ4 463 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-201ENST00000309428 CDC45O75419 566 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-201ENST00000309428 SMC5Q8IY18 1101 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 EYA1Q99502 592 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 NEK4P51957 841 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 SIL1Q9H173 461 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 SYCE3A1L190 88 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 PTMSP20962 102 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
RETREG3-201ENST00000309428 IQGAP1P46940 1657 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 CCDC173Q0VFZ6 552 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 HDAC1Q13547 482 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-201ENST00000309428 ZSCAN30Q86W11 494 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
RETREG3-201ENST00000309428 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
RETREG3-201ENST00000309428 TPM2P07951 284 aa15.42■□□□□ 0.06
RETREG3-201ENST00000309428 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-201ENST00000309428 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-201ENST00000309428 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-201ENST00000309428 ALDH1L2Q3SY69 923 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 GLI2P10070 1586 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 NSD2O96028 1365 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 HMMRO75330 724 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 MYL6BP14649 208 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 NINLQ9Y2I6 1382 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 QRICH2Q9H0J4 1663 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-201ENST00000309428 SDSP20132 328 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 CDK11BP21127 795 aaKnown RBP15.39■□□□□ 0.05
RETREG3-201ENST00000309428 MCCP23508 829 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 MLH3Q9UHC1 1453 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 GAS2L3Q86XJ1 694 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 ROBO2Q9HCK4 1378 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 NLRP2Q9NX02 1062 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 KCNQ3O43525 872 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 PPFIA3O75145 1194 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 CT47B1P0C2W7 299 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 GSPT1P15170 499 aaKnown RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 PKP1Q13835 747 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ZGPATQ8N5A5 531 aaKnown RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ZNF592Q92610 1267 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 NUCB2P80303 420 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 FOSBP53539 338 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 C9orf78Q9NZ63 289 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 MSH6P52701 1360 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ABCA9Q8IUA7 1624 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-201ENST00000309428 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 TNRQ92752 1358 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 FLIIQ13045 1269 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-201ENST00000309428 ADGRB3O60242 1522 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 SPC24Q8NBT2 197 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 ZNF830Q96NB3 372 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-201ENST00000309428 LGR6Q9HBX8 967 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 MROH1Q8NDA8 1641 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 TAF7Q15545 349 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-201ENST00000309428 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
RETREG3-201ENST00000309428 KAT6BQ8WYB5 2073 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 GNAI2P04899 355 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 MYOM1P52179 1685 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
RETREG3-201ENST00000309428 CBX1P83916 185 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 IGSF3O75054 1194 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CHRNA2Q15822 529 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
RETREG3-201ENST00000309428 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 GNAT3A8MTJ3 354 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CPA1P15085 419 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 FGD1P98174 961 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CWC27Q6UX04 472 aaKnown RBP15.34■□□□□ 0.05
RETREG3-201ENST00000309428 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.05
RETREG3-201ENST00000309428 SPG7Q9UQ90 795 aa15.33■□□□□ 0.05
RETREG3-201ENST00000309428 IL16Q14005 1332 aa15.33■□□□□ 0.05
RETREG3-201ENST00000309428 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 C1orf141Q5JVX7 400 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 FBXW7Q969H0 707 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms