RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 KCNA6P17658 529 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 K7ELQ4 463 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-201ENST00000309428 CDC45O75419 566 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-201ENST00000309428 SMC5Q8IY18 1101 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 EYA1Q99502 592 aa15.44■□□□□ 0.06
RETREG3-201ENST00000309428 NEK4P51957 841 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 SIL1Q9H173 461 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 SYCE3A1L190 88 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 PTMSP20962 102 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
RETREG3-201ENST00000309428 IQGAP1P46940 1657 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 CCDC173Q0VFZ6 552 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 HDAC1Q13547 482 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-201ENST00000309428 ZSCAN30Q86W11 494 aa15.43■□□□□ 0.06
RETREG3-201ENST00000309428 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
RETREG3-201ENST00000309428 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
RETREG3-201ENST00000309428 TPM2P07951 284 aa15.42■□□□□ 0.06
RETREG3-201ENST00000309428 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
RETREG3-201ENST00000309428 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-201ENST00000309428 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-201ENST00000309428 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-201ENST00000309428 ALDH1L2Q3SY69 923 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 GLI2P10070 1586 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 NSD2O96028 1365 aa15.41■□□□□ 0.06
RETREG3-201ENST00000309428 HMMRO75330 724 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 MYL6BP14649 208 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 NINLQ9Y2I6 1382 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 QRICH2Q9H0J4 1663 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
RETREG3-201ENST00000309428 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-201ENST00000309428 SDSP20132 328 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 CDK11BP21127 795 aaKnown RBP15.39■□□□□ 0.05
RETREG3-201ENST00000309428 MCCP23508 829 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 MLH3Q9UHC1 1453 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 FAM177BA6PVY3 158 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 GAS2L3Q86XJ1 694 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 ROBO2Q9HCK4 1378 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 NLRP2Q9NX02 1062 aa15.39■□□□□ 0.05
RETREG3-201ENST00000309428 KCNQ3O43525 872 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 PPFIA3O75145 1194 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 CT47B1P0C2W7 299 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 GSPT1P15170 499 aaKnown RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 PKP1Q13835 747 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ZGPATQ8N5A5 531 aaKnown RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ZNF592Q92610 1267 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 NUCB2P80303 420 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 FOSBP53539 338 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 C9orf78Q9NZ63 289 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-201ENST00000309428 MSH6P52701 1360 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 HECW2Q9P2P5 1572 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ABCA9Q8IUA7 1624 aa15.38■□□□□ 0.05
RETREG3-201ENST00000309428 ZNF530Q6P9A1 599 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-201ENST00000309428 CABLES1Q8TDN4 633 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 TNRQ92752 1358 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 FLIIQ13045 1269 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-201ENST00000309428 ADGRB3O60242 1522 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 SPC24Q8NBT2 197 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 ZNF830Q96NB3 372 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-201ENST00000309428 LGR6Q9HBX8 967 aa15.37■□□□□ 0.05
RETREG3-201ENST00000309428 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 MROH1Q8NDA8 1641 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 TAF7Q15545 349 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-201ENST00000309428 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
RETREG3-201ENST00000309428 KAT6BQ8WYB5 2073 aa15.36■□□□□ 0.05
RETREG3-201ENST00000309428 GNAI2P04899 355 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 MYOM1P52179 1685 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
RETREG3-201ENST00000309428 CBX1P83916 185 aa15.35■□□□□ 0.05
RETREG3-201ENST00000309428 IGSF3O75054 1194 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CHRNA2Q15822 529 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
RETREG3-201ENST00000309428 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 GNAT3A8MTJ3 354 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CPA1P15085 419 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 FGD1P98174 961 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CAMSAP1Q5T5Y3 1602 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 CWC27Q6UX04 472 aaKnown RBP15.34■□□□□ 0.05
RETREG3-201ENST00000309428 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
RETREG3-201ENST00000309428 PDCL3Q9H2J4 239 aa15.33■□□□□ 0.05
RETREG3-201ENST00000309428 SPG7Q9UQ90 795 aa15.33■□□□□ 0.05
RETREG3-201ENST00000309428 IL16Q14005 1332 aa15.33■□□□□ 0.05
RETREG3-201ENST00000309428 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 C1orf141Q5JVX7 400 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 FBXW7Q969H0 707 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms