RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
MSRB3-201ENST00000308259 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
MSRB3-201ENST00000308259 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
MSRB3-201ENST00000308259 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
MSRB3-201ENST00000308259 DCTN1Q14203 1278 aa12.71□□□□□ -0.37
MSRB3-201ENST00000308259 U2AF2P26368 475 aaKnown RBP eCLIP12.71□□□□□ -0.37
MSRB3-201ENST00000308259 TMX1Q9H3N1 280 aa12.71□□□□□ -0.37
MSRB3-201ENST00000308259 IFT172Q9UG01 1749 aa12.71□□□□□ -0.38
MSRB3-201ENST00000308259 APBB1O00213 710 aa12.71□□□□□ -0.38
MSRB3-201ENST00000308259 GLI2P10070 1586 aa12.71□□□□□ -0.38
MSRB3-201ENST00000308259 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
MSRB3-201ENST00000308259 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
MSRB3-201ENST00000308259 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
MSRB3-201ENST00000308259 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
MSRB3-201ENST00000308259 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
MSRB3-201ENST00000308259 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
MSRB3-201ENST00000308259 CALCOCO1Q9P1Z2 691 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 MLH3Q9UHC1 1453 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 SOX12O15370 315 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
MSRB3-201ENST00000308259 ZKSCAN5Q9Y2L8 839 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
MSRB3-201ENST00000308259 RRS1Q15050 365 aaKnown RBP12.69□□□□□ -0.38
MSRB3-201ENST00000308259 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
MSRB3-201ENST00000308259 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 SETBP1Q9Y6X0 1596 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 CHD1LQ86WJ1 897 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 SMC5Q8IY18 1101 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
MSRB3-201ENST00000308259 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 ABCC3O15438 1527 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 IPO8O15397 1037 aaKnown RBP12.68□□□□□ -0.38
MSRB3-201ENST00000308259 NME9Q86XW9 330 aa12.68□□□□□ -0.38
MSRB3-201ENST00000308259 PPLO60437 1756 aa12.67□□□□□ -0.38
MSRB3-201ENST00000308259 CAMSAP1Q5T5Y3 1602 aa12.67□□□□□ -0.38
MSRB3-201ENST00000308259 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
MSRB3-201ENST00000308259 FOXD4L6Q3SYB3 417 aaPredicted RBP12.67□□□□□ -0.38
MSRB3-201ENST00000308259 FOXD4L3Q6VB84 417 aaPredicted RBP12.67□□□□□ -0.38
MSRB3-201ENST00000308259 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
MSRB3-201ENST00000308259 NUCB1Q02818 461 aa12.66□□□□□ -0.38
MSRB3-201ENST00000308259 KRT24Q2M2I5 525 aa12.66□□□□□ -0.38
MSRB3-201ENST00000308259 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
MSRB3-201ENST00000308259 DRC7Q8IY82 874 aa12.66□□□□□ -0.38
MSRB3-201ENST00000308259 NSD2O96028 1365 aa12.66□□□□□ -0.38
MSRB3-201ENST00000308259 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
MSRB3-201ENST00000308259 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 KIF16BQ96L93 1317 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 YEATS2Q9ULM3 1422 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
MSRB3-201ENST00000308259 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.38
MSRB3-201ENST00000308259 CALRP27797 417 aaKnown RBP12.65□□□□□ -0.38
MSRB3-201ENST00000308259 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
MSRB3-201ENST00000308259 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
MSRB3-201ENST00000308259 NPHP1O15259 732 aa12.64□□□□□ -0.39
MSRB3-201ENST00000308259 VAMP4O75379 141 aa12.64□□□□□ -0.39
MSRB3-201ENST00000308259 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
MSRB3-201ENST00000308259 NEURL4Q96JN8 1562 aa12.64□□□□□ -0.39
MSRB3-201ENST00000308259 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
MSRB3-201ENST00000308259 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
MSRB3-201ENST00000308259 ZBTB7BO15156 539 aaPredicted RBP12.63□□□□□ -0.39
MSRB3-201ENST00000308259 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
MSRB3-201ENST00000308259 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
MSRB3-201ENST00000308259 TSPYL1Q9H0U9 437 aa12.63□□□□□ -0.39
MSRB3-201ENST00000308259 FCHSD2O94868 740 aa12.63□□□□□ -0.39
MSRB3-201ENST00000308259 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
MSRB3-201ENST00000308259 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
MSRB3-201ENST00000308259 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
MSRB3-201ENST00000308259 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
MSRB3-201ENST00000308259 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
MSRB3-201ENST00000308259 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
MSRB3-201ENST00000308259 CD163L1Q9NR16 1453 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 PSME1Q06323 249 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
MSRB3-201ENST00000308259 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
MSRB3-201ENST00000308259 NFE2L2Q16236 605 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 MYRIPQ8NFW9 859 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
MSRB3-201ENST00000308259 LMOD3Q0VAK6 560 aa12.61□□□□□ -0.39
MSRB3-201ENST00000308259 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
MSRB3-201ENST00000308259 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
MSRB3-201ENST00000308259 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
MSRB3-201ENST00000308259 ADGRB2O60241 1585 aa12.61□□□□□ -0.39
MSRB3-201ENST00000308259 SYCE3A1L190 88 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 MIS18AQ9NYP9 233 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 IL16Q14005 1332 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 A0A0G2JS52 829 aa12.6□□□□□ -0.39
MSRB3-201ENST00000308259 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
MSRB3-201ENST00000308259 SSFA2P28290 1259 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms