RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PNNQ9H307 717 aaKnown RBP9.16□□□□□ -0.94
PTCD2-201ENST00000308077 IGSF1Q8N6C5 1336 aa9.16□□□□□ -0.94
PTCD2-201ENST00000308077 SLFN5Q08AF3 891 aa9.15□□□□□ -0.94
PTCD2-201ENST00000308077 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
PTCD2-201ENST00000308077 SULT6B1Q6IMI4 303 aa9.15□□□□□ -0.94
PTCD2-201ENST00000308077 EYA1Q99502 592 aa9.15□□□□□ -0.94
PTCD2-201ENST00000308077 IGSF5Q9NSI5 407 aa9.15□□□□□ -0.94
PTCD2-201ENST00000308077 TRIM35Q9UPQ4 493 aa9.15□□□□□ -0.94
PTCD2-201ENST00000308077 ZBTB7CA1YPR0 619 aa9.14□□□□□ -0.95
PTCD2-201ENST00000308077 BAG6P46379 1132 aa9.14□□□□□ -0.95
PTCD2-201ENST00000308077 TRMT2AQ8IZ69 625 aaKnown RBP9.14□□□□□ -0.95
PTCD2-201ENST00000308077 CABLES1Q8TDN4 633 aa9.14□□□□□ -0.95
PTCD2-201ENST00000308077 KDRP35968 1356 aa9.14□□□□□ -0.95
PTCD2-201ENST00000308077 DLL1O00548 723 aa9.14□□□□□ -0.95
PTCD2-201ENST00000308077 RIPK4P57078 832 aa9.13□□□□□ -0.95
PTCD2-201ENST00000308077 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
PTCD2-201ENST00000308077 LTV1Q96GA3 475 aaPredicted RBP9.13□□□□□ -0.95
PTCD2-201ENST00000308077 NFE2L2Q16236 605 aa9.13□□□□□ -0.95
PTCD2-201ENST00000308077 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
PTCD2-201ENST00000308077 E9PSI1 815 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 WDR63Q8IWG1 891 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 SPON1Q9HCB6 807 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
PTCD2-201ENST00000308077 LMO7Q8WWI1 1683 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 ABCC6O95255 1503 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 ATRNO75882 1429 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 NEFMP07197 916 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 USHBP1Q8N6Y0 703 aa9.12□□□□□ -0.95
PTCD2-201ENST00000308077 WDR90Q96KV7 1748 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 NCAPD2Q15021 1401 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 CPDO75976 1380 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 KIAA0232Q92628 1395 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 RNF123Q5XPI4 1314 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 NBPF6Q5VWK0 638 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 NBPF4Q96M43 638 aa9.11□□□□□ -0.95
PTCD2-201ENST00000308077 ANKRD24Q8TF21 1146 aa9.1□□□□□ -0.95
PTCD2-201ENST00000308077 LRRC59Q96AG4 307 aaKnown RBP9.1□□□□□ -0.95
PTCD2-201ENST00000308077 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
PTCD2-201ENST00000308077 FKBP8Q14318 412 aa9.1□□□□□ -0.95
PTCD2-201ENST00000308077 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
PTCD2-201ENST00000308077 COL22A1Q8NFW1 1626 aaPredicted RBP9.1□□□□□ -0.95
PTCD2-201ENST00000308077 ERBB3P21860 1342 aa9.09□□□□□ -0.95
PTCD2-201ENST00000308077 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
PTCD2-201ENST00000308077 CHRNA2Q15822 529 aa9.09□□□□□ -0.95
PTCD2-201ENST00000308077 THUMPD2Q9BTF0 503 aaKnown RBP9.09□□□□□ -0.95
PTCD2-201ENST00000308077 IL16Q14005 1332 aa9.09□□□□□ -0.95
PTCD2-201ENST00000308077 MTHFSDQ2M296 383 aaKnown RBP9.09□□□□□ -0.95
PTCD2-201ENST00000308077 NEFLP07196 543 aa9.08□□□□□ -0.96
PTCD2-201ENST00000308077 DCTN1Q14203 1278 aa9.07□□□□□ -0.96
PTCD2-201ENST00000308077 TSR2Q969E8 191 aaKnown RBP9.07□□□□□ -0.96
PTCD2-201ENST00000308077 FANCIQ9NVI1 1328 aa9.07□□□□□ -0.96
PTCD2-201ENST00000308077 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
PTCD2-201ENST00000308077 KCNQ2O43526 872 aa9.07□□□□□ -0.96
PTCD2-201ENST00000308077 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
PTCD2-201ENST00000308077 RRP1P56182 461 aaKnown RBP9.06□□□□□ -0.96
PTCD2-201ENST00000308077 LMOD3Q0VAK6 560 aa9.06□□□□□ -0.96
PTCD2-201ENST00000308077 PRDM11Q9NQV5 511 aa9.06□□□□□ -0.96
PTCD2-201ENST00000308077 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
PTCD2-201ENST00000308077 PPP4R3CPQ6ZMV5 832 aa9.06□□□□□ -0.96
PTCD2-201ENST00000308077 MCM10Q7L590 875 aa9.06□□□□□ -0.96
PTCD2-201ENST00000308077 COL5A2P05997 1499 aaPredicted RBP9.06□□□□□ -0.96
PTCD2-201ENST00000308077 ZNF853P0CG23 659 aa9.05□□□□□ -0.96
PTCD2-201ENST00000308077 HAP1P54257 671 aaPredicted RBP9.05□□□□□ -0.96
PTCD2-201ENST00000308077 GAS2L2Q8NHY3 880 aa9.05□□□□□ -0.96
PTCD2-201ENST00000308077 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
PTCD2-201ENST00000308077 CRB1P82279 1406 aa9.04□□□□□ -0.96
PTCD2-201ENST00000308077 COL14A1Q05707 1796 aaKnown RBP9.04□□□□□ -0.96
PTCD2-201ENST00000308077 MAP3K5Q99683 1374 aa9.04□□□□□ -0.96
PTCD2-201ENST00000308077 EXOSC9Q06265 439 aaKnown RBP9.04□□□□□ -0.96
PTCD2-201ENST00000308077 IFT57Q9NWB7 429 aa9.04□□□□□ -0.96
PTCD2-201ENST00000308077 NLRP2Q9NX02 1062 aa9.04□□□□□ -0.96
PTCD2-201ENST00000308077 LAS1LQ9Y4W2 734 aaKnown RBP9.04□□□□□ -0.96
PTCD2-201ENST00000308077 BRWD3Q6RI45 1802 aa9.04□□□□□ -0.96
PTCD2-201ENST00000308077 MEGF6O75095 1541 aa9.04□□□□□ -0.96
PTCD2-201ENST00000308077 PLIN1O60240 522 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 CALD1Q05682 793 aaKnown RBP9.03□□□□□ -0.96
PTCD2-201ENST00000308077 C8orf37Q96NL8 207 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 MBIPQ9NS73 344 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 PKD1L3Q7Z443 1732 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 BCAR3O75815 825 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 GNAI1P63096 354 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 CFAP44Q96MT7 982 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 WDR17Q8IZU2 1322 aa9.03□□□□□ -0.96
PTCD2-201ENST00000308077 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
PTCD2-201ENST00000308077 GNAT3A8MTJ3 354 aa9.02□□□□□ -0.97
PTCD2-201ENST00000308077 HTATSF1O43719 755 aaKnown RBP9.02□□□□□ -0.97
PTCD2-201ENST00000308077 RARSP54136 660 aaKnown RBP9.02□□□□□ -0.97
PTCD2-201ENST00000308077 IL17REQ8NFR9 667 aa9.02□□□□□ -0.97
PTCD2-201ENST00000308077 RTF1Q92541 710 aaKnown RBP9.02□□□□□ -0.97
PTCD2-201ENST00000308077 ADAMTS7Q9UKP4 1686 aa9.01□□□□□ -0.97
PTCD2-201ENST00000308077 PARP4Q9UKK3 1724 aaKnown RBP9.01□□□□□ -0.97
PTCD2-201ENST00000308077 CHL1O00533 1208 aa9.01□□□□□ -0.97
PTCD2-201ENST00000308077 PLEKHO1Q53GL0 409 aaPredicted RBP9.01□□□□□ -0.97
PTCD2-201ENST00000308077 ZNF530Q6P9A1 599 aaPredicted RBP9.01□□□□□ -0.97
PTCD2-201ENST00000308077 CEMIPQ8WUJ3 1361 aa9.01□□□□□ -0.97
PTCD2-201ENST00000308077 CT47B1P0C2W7 299 aaPredicted RBP9□□□□□ -0.97
PTCD2-201ENST00000308077 AMOTQ4VCS5 1084 aa9□□□□□ -0.97
PTCD2-201ENST00000308077 C20orf194Q5TEA3 1177 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms