RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 IDI1Q13907 227 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 LMBRD1Q9NUN5 540 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
SEC23A-201ENST00000307712 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
SEC23A-201ENST00000307712 ZNF445P59923 1031 aa16.12■□□□□ 0.17
SEC23A-201ENST00000307712 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
SEC23A-201ENST00000307712 CAMK4Q16566 473 aa16.12■□□□□ 0.17
SEC23A-201ENST00000307712 TPM4P67936 248 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 LARP1BQ659C4 914 aaKnown RBP16.11■□□□□ 0.17
SEC23A-201ENST00000307712 CCDC83Q8IWF9 413 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 CEBPZQ03701 1054 aaKnown RBP16.11■□□□□ 0.17
SEC23A-201ENST00000307712 TEFQ10587 303 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 ZMYM3Q14202 1370 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 KDM5DQ9BY66 1539 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 FAM177BA6PVY3 158 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
SEC23A-201ENST00000307712 PPP1R9BQ96SB3 815 aa16.11■□□□□ 0.17
SEC23A-201ENST00000307712 TNMDQ9H2S6 317 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 PDE1AP54750 535 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.175e-8■□□□□ 10.4
SEC23A-201ENST00000307712 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 KRT85P78386 507 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
SEC23A-201ENST00000307712 CASTP20810 708 aaKnown RBP16.09■□□□□ 0.17
SEC23A-201ENST00000307712 STK3Q13188 491 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 NUTM2GQ5VZR2 741 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 USP48Q86UV5 1035 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 PODXL2Q9NZ53 605 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 PTPRTO14522 1441 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 SRGAP3O43295 1099 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 GIMAP6Q6P9H5 292 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEC23A-201ENST00000307712 PLCH2O75038 1416 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.172e-7■■■□□ 15.2
SEC23A-201ENST00000307712 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
SEC23A-201ENST00000307712 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.17
SEC23A-201ENST00000307712 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.17
SEC23A-201ENST00000307712 NUP62CLQ9H1M0 184 aa16.08■□□□□ 0.17
SEC23A-201ENST00000307712 POLKQ9UBT6 870 aa16.08■□□□□ 0.17
SEC23A-201ENST00000307712 PDCP20941 246 aa16.08■□□□□ 0.16
SEC23A-201ENST00000307712 CCDC73Q6ZRK6 1079 aa16.08■□□□□ 0.16
SEC23A-201ENST00000307712 PDRG1Q9NUG6 133 aa16.08■□□□□ 0.16
SEC23A-201ENST00000307712 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
SEC23A-201ENST00000307712 ABCC10Q5T3U5 1492 aa16.07■□□□□ 0.16
SEC23A-201ENST00000307712 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
SEC23A-201ENST00000307712 CEP85Q6P2H3 762 aa16.07■□□□□ 0.16
SEC23A-201ENST00000307712 CCAR2Q8N163 923 aaKnown RBP16.07■□□□□ 0.16
SEC23A-201ENST00000307712 GSPT1P15170 499 aaKnown RBP16.06■□□□□ 0.16
SEC23A-201ENST00000307712 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
SEC23A-201ENST00000307712 PRDM15P57071 1507 aaPredicted RBP16.06■□□□□ 0.16
SEC23A-201ENST00000307712 CKAP2LQ8IYA6 745 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 FSD1Q9BTV5 496 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 LRRFIP2Q9Y608 721 aaKnown RBP16.06■□□□□ 0.16
SEC23A-201ENST00000307712 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 MAP3K11Q16584 847 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 AEBP1Q8IUX7 1158 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 PRIMPOLQ96LW4 560 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
SEC23A-201ENST00000307712 STX6O43752 255 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 FMNL2Q96PY5 1086 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 PSMA5P28066 241 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 C17orf53Q8N3J3 647 aaPredicted RBP16.05■□□□□ 0.16
SEC23A-201ENST00000307712 TSC1Q92574 1164 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
SEC23A-201ENST00000307712 C16orf45Q96MC5 204 aaPredicted RBP16.05■□□□□ 0.16
SEC23A-201ENST00000307712 SDF4Q9BRK5 362 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
SEC23A-201ENST00000307712 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
SEC23A-201ENST00000307712 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-201ENST00000307712 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
SEC23A-201ENST00000307712 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
SEC23A-201ENST00000307712 ADGRL1O94910 1474 aa16.04■□□□□ 0.16
SEC23A-201ENST00000307712 UVSSAQ2YD98 709 aa16.04■□□□□ 0.16
SEC23A-201ENST00000307712 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
SEC23A-201ENST00000307712 AIMP1Q12904 312 aaKnown RBP16.04■□□□□ 0.16
SEC23A-201ENST00000307712 NLRP6P59044 892 aa16.03■□□□□ 0.16
SEC23A-201ENST00000307712 UBE2HP62256 183 aa16.03■□□□□ 0.16
SEC23A-201ENST00000307712 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
SEC23A-201ENST00000307712 PTPRCP08575 1304 aa16.03■□□□□ 0.16
SEC23A-201ENST00000307712 IGSF3O75054 1194 aa16.02■□□□□ 0.16
SEC23A-201ENST00000307712 GPT2Q8TD30 523 aa16.02■□□□□ 0.16
SEC23A-201ENST00000307712 TFIP11Q9UBB9 837 aaKnown RBP16.02■□□□□ 0.16
SEC23A-201ENST00000307712 ERVK-7P63135 1459 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms