RNA–Protein interactions for RNA: ENST00000307358.6

HTRA3-201, Transcript of HtrA serine peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA3, Length 2,541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3-201ENST00000307358 NCLP19338 710 aaKnown RBP23.43■■□□□ 1.34
HTRA3-201ENST00000307358 NUCB2P80303 420 aa23.43■■□□□ 1.34
HTRA3-201ENST00000307358 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
HTRA3-201ENST00000307358 ZSCAN23Q3MJ62 389 aa23.42■■□□□ 1.34
HTRA3-201ENST00000307358 KIAA1211Q6ZU35 1233 aa23.42■■□□□ 1.34
HTRA3-201ENST00000307358 DCTN1Q14203 1278 aa23.42■■□□□ 1.34
HTRA3-201ENST00000307358 TPM2P07951 284 aa23.41■■□□□ 1.34
HTRA3-201ENST00000307358 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
HTRA3-201ENST00000307358 TNRQ92752 1358 aa23.41■■□□□ 1.34
HTRA3-201ENST00000307358 VSIG10Q8N0Z9 540 aa23.41■■□□□ 1.34
HTRA3-201ENST00000307358 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.41■■□□□ 1.34
HTRA3-201ENST00000307358 WASLO00401 505 aaPredicted RBP23.4■■□□□ 1.34
HTRA3-201ENST00000307358 ATP7BP35670 1465 aa23.4■■□□□ 1.34
HTRA3-201ENST00000307358 INTS3Q68E01 1043 aaKnown RBP23.4■■□□□ 1.34
HTRA3-201ENST00000307358 ZGPATQ8N5A5 531 aaKnown RBP23.4■■□□□ 1.34
HTRA3-201ENST00000307358 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.34
HTRA3-201ENST00000307358 SDSP20132 328 aa23.39■■□□□ 1.33
HTRA3-201ENST00000307358 KIF24Q5T7B8 1368 aa23.39■■□□□ 1.33
HTRA3-201ENST00000307358 RBSNQ9H1K0 784 aa23.38■■□□□ 1.33
HTRA3-201ENST00000307358 MSNP26038 577 aaKnown RBP23.38■■□□□ 1.33
HTRA3-201ENST00000307358 NME9Q86XW9 330 aa23.38■■□□□ 1.33
HTRA3-201ENST00000307358 ANKRD44Q8N8A2 993 aa23.38■■□□□ 1.33
HTRA3-201ENST00000307358 CDK12Q9NYV4 1490 aaPredicted RBP23.38■■□□□ 1.33
HTRA3-201ENST00000307358 SMARCA5O60264 1052 aaPredicted RBP23.37■■□□□ 1.33
HTRA3-201ENST00000307358 APBB1O00213 710 aa23.37■■□□□ 1.33
HTRA3-201ENST00000307358 OFD1O75665 1012 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 RGS12O14924 1447 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 GPT2Q8TD30 523 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 ZDHHC9Q9Y397 364 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 CPSF1Q10570 1443 aaKnown RBP23.36■■□□□ 1.33
HTRA3-201ENST00000307358 TMEM2Q9UHN6 1383 aa23.36■■□□□ 1.33
HTRA3-201ENST00000307358 PRPF40AO75400 957 aaKnown RBP23.35■■□□□ 1.33
HTRA3-201ENST00000307358 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
HTRA3-201ENST00000307358 CEP85Q6P2H3 762 aa23.35■■□□□ 1.33
HTRA3-201ENST00000307358 CHAMP1Q96JM3 812 aa23.35■■□□□ 1.33
HTRA3-201ENST00000307358 RBM27Q9P2N5 1060 aaKnown RBP23.35■■□□□ 1.33
HTRA3-201ENST00000307358 ST18O60284 1047 aa23.34■■□□□ 1.33
HTRA3-201ENST00000307358 RRS1Q15050 365 aaKnown RBP23.34■■□□□ 1.33
HTRA3-201ENST00000307358 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
HTRA3-201ENST00000307358 CWC22Q9HCG8 908 aaKnown RBP23.34■■□□□ 1.33
HTRA3-201ENST00000307358 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
HTRA3-201ENST00000307358 MSH6P52701 1360 aa23.33■■□□□ 1.33
HTRA3-201ENST00000307358 TECPR2O15040 1411 aa23.33■■□□□ 1.32
HTRA3-201ENST00000307358 RPAP2Q8IXW5 612 aaPredicted RBP23.32■■□□□ 1.32
HTRA3-201ENST00000307358 PDLIM2Q96JY6 352 aa23.32■■□□□ 1.32
HTRA3-201ENST00000307358 ZMYND15Q9H091 742 aa23.32■■□□□ 1.32
HTRA3-201ENST00000307358 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
HTRA3-201ENST00000307358 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
HTRA3-201ENST00000307358 EDC4Q6P2E9 1401 aaKnown RBP23.31■■□□□ 1.32
HTRA3-201ENST00000307358 LTKP29376 864 aa23.31■■□□□ 1.32
HTRA3-201ENST00000307358 CASC1Q6TDU7 716 aa23.31■■□□□ 1.32
HTRA3-201ENST00000307358 ADAMTS13Q76LX8 1427 aa23.3■■□□□ 1.32
HTRA3-201ENST00000307358 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
HTRA3-201ENST00000307358 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.3■■□□□ 1.32
HTRA3-201ENST00000307358 CPS1P31327 1500 aa23.3■■□□□ 1.32
HTRA3-201ENST00000307358 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.3■■□□□ 1.32
HTRA3-201ENST00000307358 MEIS3Q99687 375 aa23.3■■□□□ 1.32
HTRA3-201ENST00000307358 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
HTRA3-201ENST00000307358 NSFL1CQ9UNZ2 370 aaKnown RBP23.29■■□□□ 1.32
HTRA3-201ENST00000307358 AATKQ6ZMQ8 1374 aa23.29■■□□□ 1.32
HTRA3-201ENST00000307358 HS1BP3Q53T59 392 aa23.29■■□□□ 1.32
HTRA3-201ENST00000307358 TMEM63CQ9P1W3 806 aa23.29■■□□□ 1.32
HTRA3-201ENST00000307358 NOL7Q9UMY1 257 aaKnown RBP23.29■■□□□ 1.32
HTRA3-201ENST00000307358 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
HTRA3-201ENST00000307358 PKNOX2Q96KN3 472 aa23.28■■□□□ 1.32
HTRA3-201ENST00000307358 REC8O95072 547 aa23.28■■□□□ 1.32
HTRA3-201ENST00000307358 FOXD4L5Q5VV16 416 aaPredicted RBP23.27■■□□□ 1.32
HTRA3-201ENST00000307358 AEBP1Q8IUX7 1158 aa23.27■■□□□ 1.32
HTRA3-201ENST00000307358 FOXD4L4Q8WXT5 416 aaPredicted RBP23.27■■□□□ 1.32
HTRA3-201ENST00000307358 SIRT1Q96EB6 747 aa23.26■■□□□ 1.31
HTRA3-201ENST00000307358 PDCL3Q9H2J4 239 aa23.26■■□□□ 1.31
HTRA3-201ENST00000307358 SYCE3A1L190 88 aa23.26■■□□□ 1.31
HTRA3-201ENST00000307358 ERC2O15083 957 aa23.26■■□□□ 1.31
HTRA3-201ENST00000307358 TRHP20396 242 aaPredicted RBP23.26■■□□□ 1.31
HTRA3-201ENST00000307358 MON2Q7Z3U7 1717 aa23.26■■□□□ 1.31
HTRA3-201ENST00000307358 PLPPR3Q6T4P5 718 aa23.25■■□□□ 1.31
HTRA3-201ENST00000307358 COG3Q96JB2 828 aa23.25■■□□□ 1.31
HTRA3-201ENST00000307358 XPCQ01831 940 aaPredicted RBP23.25■■□□□ 1.31
HTRA3-201ENST00000307358 ZNF500O60304 480 aaPredicted RBP23.24■■□□□ 1.31
HTRA3-201ENST00000307358 LRSAM1Q6UWE0 723 aa23.24■■□□□ 1.31
HTRA3-201ENST00000307358 R3HCC1Q9Y3T6 440 aaKnown RBP23.24■■□□□ 1.31
HTRA3-201ENST00000307358 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
HTRA3-201ENST00000307358 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
HTRA3-201ENST00000307358 MCM10Q7L590 875 aa23.23■■□□□ 1.31
HTRA3-201ENST00000307358 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
HTRA3-201ENST00000307358 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
HTRA3-201ENST00000307358 CHL1O00533 1208 aa23.22■■□□□ 1.31
HTRA3-201ENST00000307358 NEK4P51957 841 aa23.22■■□□□ 1.31
HTRA3-201ENST00000307358 TERF1P54274 439 aa23.22■■□□□ 1.31
HTRA3-201ENST00000307358 TMX3Q96JJ7 454 aa23.22■■□□□ 1.31
HTRA3-201ENST00000307358 RBM10P98175 930 aaKnown RBP23.21■■□□□ 1.31
HTRA3-201ENST00000307358 PTPRCP08575 1304 aa23.21■■□□□ 1.31
HTRA3-201ENST00000307358 C3P01024 1663 aa23.21■■□□□ 1.31
HTRA3-201ENST00000307358 SULT6B1Q6IMI4 303 aa23.21■■□□□ 1.31
HTRA3-201ENST00000307358 ZKSCAN5Q9Y2L8 839 aa23.21■■□□□ 1.31
HTRA3-201ENST00000307358 ITSN1Q15811 1721 aa23.2■■□□□ 1.31
HTRA3-201ENST00000307358 PDE1AP54750 535 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms