RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 ABCC3O15438 1527 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 RGS12O14924 1447 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 CCDC183Q5T5S1 534 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 C14orf93Q9H972 538 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 RRP7AQ9Y3A4 280 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 NRKQ7Z2Y5 1582 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 CACNA1FO60840 1977 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 DNTTIP2Q5QJE6 756 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 DCTPP1Q9H773 170 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 TMEM63CQ9P1W3 806 aa6.53□□□□□ -1.36
USP8-201ENST00000307179 CGNQ9P2M7 1197 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
USP8-201ENST00000307179 FCHSD2O94868 740 aa6.52□□□□□ -1.36
USP8-201ENST00000307179 RPAP2Q8IXW5 612 aaPredicted RBP6.52□□□□□ -1.36
USP8-201ENST00000307179 RTL1A6NKG5 1358 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 SYCE3A1L190 88 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 GNAI1P63096 354 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 ERC2O15083 957 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 MRPL50Q8N5N7 158 aaKnown RBP6.52□□□□□ -1.37
USP8-201ENST00000307179 OSBPL3Q9H4L5 887 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 ATP6V1DQ9Y5K8 247 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 KIDINS220Q9ULH0 1771 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 RNF20Q5VTR2 975 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 PLEKHM2Q8IWE5 1019 aa6.52□□□□□ -1.37
USP8-201ENST00000307179 ATP7BP35670 1465 aa6.51□□□□□ -1.37
USP8-201ENST00000307179 ZNF710Q8N1W2 664 aa6.51□□□□□ -1.37
USP8-201ENST00000307179 AOX1Q06278 1338 aa6.51□□□□□ -1.37
USP8-201ENST00000307179 CFAP70Q5T0N1 1121 aa6.51□□□□□ -1.37
USP8-201ENST00000307179 ATP10DQ9P241 1426 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 ARHGEF40Q8TER5 1519 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 CRYBG1Q9Y4K1 1723 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.5□□□□□ -1.37
USP8-201ENST00000307179 ZDHHC9Q9Y397 364 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 PAXBP1Q9Y5B6 917 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 DLC1Q96QB1 1528 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 ADGRF5Q8IZF2 1346 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 ARHGEF10O15013 1369 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 SMTNL1A8MU46 457 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 GSPT1P15170 499 aaKnown RBP6.5□□□□□ -1.37
USP8-201ENST00000307179 TSR2Q969E8 191 aaKnown RBP6.5□□□□□ -1.37
USP8-201ENST00000307179 BCL2L12Q9HB09 334 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 RPAP1Q9BWH6 1393 aaPredicted RBP6.5□□□□□ -1.37
USP8-201ENST00000307179 ANKRD44Q8N8A2 993 aa6.5□□□□□ -1.37
USP8-201ENST00000307179 HMMRO75330 724 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 MX1P20591 662 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 DHX8Q14562 1220 aaKnown RBP6.49□□□□□ -1.37
USP8-201ENST00000307179 DIAPH1O60610 1272 aaKnown RBP6.49□□□□□ -1.37
USP8-201ENST00000307179 PLEKHG5O94827 1062 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 CAVIN2O95810 425 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 SLFNL1Q499Z3 407 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 TERF2IPQ9NYB0 399 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 CCDC171Q6TFL3 1326 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 MAP2P11137 1827 aaKnown RBP6.49□□□□□ -1.37
USP8-201ENST00000307179 PREX1Q8TCU6 1659 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 ADGRL3Q9HAR2 1447 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 KDM4AO75164 1064 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 UBE2HP62256 183 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 KIAA1524Q8TCG1 905 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 FOXD4L1Q9NU39 408 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 ZHX1Q9UKY1 873 aaPredicted RBP6.49□□□□□ -1.37
USP8-201ENST00000307179 PTPRCP08575 1304 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 KIAA0232Q92628 1395 aa6.49□□□□□ -1.37
USP8-201ENST00000307179 RBM27Q9P2N5 1060 aaKnown RBP6.49□□□□□ -1.37
USP8-201ENST00000307179 MON2Q7Z3U7 1717 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 A0A1W2PP64 1363 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 NEMFO60524 1076 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 ZNF853P0CG23 659 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 NFE2L2Q16236 605 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
USP8-201ENST00000307179 CALCOCO1Q9P1Z2 691 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 KIF2AO00139 706 aaPredicted RBP6.48□□□□□ -1.37
USP8-201ENST00000307179 ADCY5O95622 1261 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 TUBB4AP04350 444 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 IPO4Q8TEX9 1081 aaKnown RBP6.48□□□□□ -1.37
USP8-201ENST00000307179 TMX3Q96JJ7 454 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
USP8-201ENST00000307179 MORC2Q9Y6X9 1032 aaPredicted RBP6.48□□□□□ -1.37
USP8-201ENST00000307179 PXDNLA1KZ92 1463 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 VAMP4O75379 141 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 CDC25BP30305 580 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 DNAJC2Q99543 621 aaKnown RBP6.47□□□□□ -1.37
USP8-201ENST00000307179 SETD1AO15047 1707 aaKnown RBP6.47□□□□□ -1.37
USP8-201ENST00000307179 CD163L1Q9NR16 1453 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 AEBP1Q8IUX7 1158 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 AKAP12Q02952 1782 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 SIRT2Q8IXJ6 389 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 SLC12A5Q9H2X9 1139 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 AATKQ6ZMQ8 1374 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 RIMS2Q9UQ26 1411 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 TCHHQ07283 1943 aa6.47□□□□□ -1.37
USP8-201ENST00000307179 PTPRMP28827 1452 aa6.46□□□□□ -1.37
USP8-201ENST00000307179 CBX1P83916 185 aa6.46□□□□□ -1.37
USP8-201ENST00000307179 PDE4CQ08493 712 aa6.46□□□□□ -1.37
USP8-201ENST00000307179 ATP2B3Q16720 1220 aa6.46□□□□□ -1.37
USP8-201ENST00000307179 DDX41Q9UJV9 622 aaKnown RBP6.46□□□□□ -1.37
USP8-201ENST00000307179 FAM208AQ9UK61 1670 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms