RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 B4GALNT4Q76KP1 1039 aa22.51■■□□□ 1.19
BPTF-201ENST00000306378 CNKSR2Q8WXI2 1034 aa22.51■■□□□ 1.19
BPTF-201ENST00000306378 NOL3O60936 208 aaKnown RBP22.51■■□□□ 1.19
BPTF-201ENST00000306378 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
BPTF-201ENST00000306378 C1orf141Q5JVX7 400 aa22.5■■□□□ 1.19
BPTF-201ENST00000306378 PAFAH1B1P43034 410 aa22.5■■□□□ 1.19
BPTF-201ENST00000306378 KIF5BP33176 963 aa22.5■■□□□ 1.19
BPTF-201ENST00000306378 AIMP1Q12904 312 aaKnown RBP22.5■■□□□ 1.19
BPTF-201ENST00000306378 CFAP100Q494V2 611 aa22.49■■□□□ 1.19
BPTF-201ENST00000306378 USO1O60763 962 aaKnown RBP22.49■■□□□ 1.19
BPTF-201ENST00000306378 POTEDQ86YR6 584 aa22.49■■□□□ 1.19
BPTF-201ENST00000306378 OPA1O60313 960 aa22.49■■□□□ 1.19
BPTF-201ENST00000306378 AMPHP49418 695 aa22.48■■□□□ 1.19
BPTF-201ENST00000306378 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
BPTF-201ENST00000306378 TNNT1P13805 278 aa22.48■■□□□ 1.19
BPTF-201ENST00000306378 HOOK3Q86VS8 718 aa22.48■■□□□ 1.19
BPTF-201ENST00000306378 NAP1L3Q99457 506 aaPredicted RBP22.48■■□□□ 1.19
BPTF-201ENST00000306378 AK9Q5TCS8 1911 aa22.48■■□□□ 1.19
BPTF-201ENST00000306378 PHAXQ9H814 394 aaKnown RBP22.47■■□□□ 1.19
BPTF-201ENST00000306378 NOL7Q9UMY1 257 aaKnown RBP22.47■■□□□ 1.19
BPTF-201ENST00000306378 STX1AQ16623 288 aa22.47■■□□□ 1.19
BPTF-201ENST00000306378 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
BPTF-201ENST00000306378 ZNF330Q9Y3S2 320 aaPredicted RBP22.47■■□□□ 1.19
BPTF-201ENST00000306378 FAM177A1Q8N128 213 aaPredicted RBP22.47■■□□□ 1.19
BPTF-201ENST00000306378 SH2B1Q9NRF2 756 aaPredicted RBP22.47■■□□□ 1.19
BPTF-201ENST00000306378 CCDC121Q6ZUS5 278 aa22.46■■□□□ 1.19
BPTF-201ENST00000306378 WWC2Q6AWC2 1192 aa22.46■■□□□ 1.19
BPTF-201ENST00000306378 CTCFLQ8NI51 663 aaPredicted RBP22.46■■□□□ 1.19
BPTF-201ENST00000306378 HSF2BPO75031 334 aa22.46■■□□□ 1.19
BPTF-201ENST00000306378 COG3Q96JB2 828 aa22.46■■□□□ 1.19
BPTF-201ENST00000306378 C16orf45Q96MC5 204 aaPredicted RBP22.46■■□□□ 1.19
BPTF-201ENST00000306378 ZNF428Q96B54 188 aa22.46■■□□□ 1.19
BPTF-201ENST00000306378 LARP1BQ659C4 914 aaKnown RBP22.46■■□□□ 1.19
BPTF-201ENST00000306378 BCL2L13Q9BXK5 485 aa22.46■■□□□ 1.19
BPTF-201ENST00000306378 SNW1Q13573 536 aaKnown RBP22.45■■□□□ 1.18
BPTF-201ENST00000306378 ZBTB17Q13105 803 aa22.45■■□□□ 1.18
BPTF-201ENST00000306378 TERF1P54274 439 aa22.45■■□□□ 1.18
BPTF-201ENST00000306378 GABPB1Q06547 395 aaPredicted RBP22.45■■□□□ 1.18
BPTF-201ENST00000306378 KRT18P05783 430 aaKnown RBP22.45■■□□□ 1.18
BPTF-201ENST00000306378 CEP135Q66GS9 1140 aa22.45■■□□□ 1.18
BPTF-201ENST00000306378 TOP1P11387 765 aaKnown RBP22.45■■□□□ 1.18
BPTF-201ENST00000306378 RBM25P49756 843 aaKnown RBP22.45■■□□□ 1.18
BPTF-201ENST00000306378 TTC5Q8N0Z6 440 aa22.45■■□□□ 1.18
BPTF-201ENST00000306378 TCHPQ9BT92 498 aa22.45■■□□□ 1.18
BPTF-201ENST00000306378 SOGA1O94964 1423 aa22.44■■□□□ 1.18
BPTF-201ENST00000306378 UBTFL1P0CB47 393 aaPredicted RBP22.44■■□□□ 1.18
BPTF-201ENST00000306378 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
BPTF-201ENST00000306378 BCCIPQ9P287 314 aaKnown RBP eCLIP22.44■■□□□ 1.18
BPTF-201ENST00000306378 GOLIM4O00461 696 aa22.44■■□□□ 1.18
BPTF-201ENST00000306378 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
BPTF-201ENST00000306378 BMP2KQ9NSY1 1161 aaPredicted RBP22.44■■□□□ 1.18
BPTF-201ENST00000306378 FMNL3Q8IVF7 1028 aa22.44■■□□□ 1.18
BPTF-201ENST00000306378 PAK3O75914 559 aaPredicted RBP22.43■■□□□ 1.18
BPTF-201ENST00000306378 CCDC9Q9Y3X0 531 aaKnown RBP22.43■■□□□ 1.18
BPTF-201ENST00000306378 DDX23Q9BUQ8 820 aaKnown RBP22.43■■□□□ 1.18
BPTF-201ENST00000306378 TBC1D2BQ9UPU7 963 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 OGFRQ9NZT2 677 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 SEPT14Q6ZU15 432 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 PYM1Q9BRP8 204 aaKnown RBP22.43■■□□□ 1.18
BPTF-201ENST00000306378 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
BPTF-201ENST00000306378 FSD2A1L4K1 749 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
BPTF-201ENST00000306378 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.43■■□□□ 1.189e-7■■■■□ 21.2
BPTF-201ENST00000306378 TACC1O75410 805 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 IFT74Q96LB3 600 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 STIM2Q9P246 746 aa22.43■■□□□ 1.18
BPTF-201ENST00000306378 CCDC6Q16204 474 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 FKBP15Q5T1M5 1219 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 SUDS3Q9H7L9 328 aaPredicted RBP22.42■■□□□ 1.18
BPTF-201ENST00000306378 SOX12O15370 315 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 GTF2E1P29083 439 aaPredicted RBP22.42■■□□□ 1.18
BPTF-201ENST00000306378 C11orf95C9JLR9 678 aaPredicted RBP22.42■■□□□ 1.18
BPTF-201ENST00000306378 TEFQ10587 303 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 FSD1Q9BTV5 496 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 CCDC38Q502W7 563 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 AKNAQ7Z591 1439 aa22.42■■□□□ 1.18
BPTF-201ENST00000306378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.42■■□□□ 1.18
BPTF-201ENST00000306378 LUC7L2Q9Y383 392 aaKnown RBP22.41■■□□□ 1.18
BPTF-201ENST00000306378 ST20-MTHFSA0A0A6YYL1 179 aa22.41■■□□□ 1.18
BPTF-201ENST00000306378 FKBP5Q13451 457 aaPredicted RBP22.41■■□□□ 1.18
BPTF-201ENST00000306378 IFI16Q16666 785 aaKnown RBP22.41■■□□□ 1.18
BPTF-201ENST00000306378 RRP7AQ9Y3A4 280 aaKnown RBP22.41■■□□□ 1.18
BPTF-201ENST00000306378 KIF4BQ2VIQ3 1234 aa22.41■■□□□ 1.18
BPTF-201ENST00000306378 DDX19AQ9NUU7 478 aaKnown RBP22.41■■□□□ 1.18
BPTF-201ENST00000306378 YEATS4O95619 227 aa22.41■■□□□ 1.18
BPTF-201ENST00000306378 CCDC57Q2TAC2 916 aa22.41■■□□□ 1.18
BPTF-201ENST00000306378 FBF1Q8TES7 1133 aa22.41■■□□□ 1.18
BPTF-201ENST00000306378 PLVAPQ9BX97 442 aa22.4■■□□□ 1.18
BPTF-201ENST00000306378 MRVI1Q9Y6F6 885 aa22.4■■□□□ 1.18
BPTF-201ENST00000306378 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
BPTF-201ENST00000306378 GSTTP1A0A1W2PQM5 241 aa22.4■■□□□ 1.18
BPTF-201ENST00000306378 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
BPTF-201ENST00000306378 XPCQ01831 940 aaPredicted RBP22.39■■□□□ 1.17
BPTF-201ENST00000306378 MYCBPQ99417 103 aaPredicted RBP22.39■■□□□ 1.17
BPTF-201ENST00000306378 FERP16591 822 aa22.38■■□□□ 1.17
BPTF-201ENST00000306378 WIZO95785 1651 aa22.38■■□□□ 1.17
BPTF-201ENST00000306378 MYH10P35580 1976 aa22.38■■□□□ 1.17
BPTF-201ENST00000306378 SAFB2Q14151 953 aaKnown RBP eCLIP22.38■■□□□ 1.17
BPTF-201ENST00000306378 RASAL2Q9UJF2 1139 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms