RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 CAVIN4Q5BKX8 364 aa16.89■□□□□ 0.29
ALCAM-201ENST00000306107 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
ALCAM-201ENST00000306107 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
ALCAM-201ENST00000306107 CEP89Q96ST8 783 aa16.89■□□□□ 0.29
ALCAM-201ENST00000306107 WDR62O43379 1518 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 NBPF5PQ86XG9 351 aaPredicted RBP16.88■□□□□ 0.29
ALCAM-201ENST00000306107 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
ALCAM-201ENST00000306107 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 ATP5J2-PTCD1G3V325 749 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
ALCAM-201ENST00000306107 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
ALCAM-201ENST00000306107 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
ALCAM-201ENST00000306107 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
ALCAM-201ENST00000306107 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
ALCAM-201ENST00000306107 XBP1P17861 261 aa16.87■□□□□ 0.29
ALCAM-201ENST00000306107 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
ALCAM-201ENST00000306107 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
ALCAM-201ENST00000306107 ANXA1P04083 346 aa16.87■□□□□ 0.29
ALCAM-201ENST00000306107 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
ALCAM-201ENST00000306107 F6X3S4 739 aa16.87■□□□□ 0.29
ALCAM-201ENST00000306107 CCDC47Q96A33 483 aaKnown RBP16.87■□□□□ 0.29
ALCAM-201ENST00000306107 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
ALCAM-201ENST00000306107 PTMSP20962 102 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 POLD1P28340 1107 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 PDE3AQ14432 1141 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 ATP10AO60312 1499 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 HIP1O00291 1037 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 CDC45O75419 566 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 TDO2P48775 406 aa16.86■□□□□ 0.29
ALCAM-201ENST00000306107 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
ALCAM-201ENST00000306107 UGGT2Q9NYU1 1516 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
ALCAM-201ENST00000306107 FAM83GA6ND36 823 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 ZSCAN25Q6NSZ9 544 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 BRMS1Q9HCU9 246 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 DDX17Q92841 729 aaKnown RBP16.85■□□□□ 0.29
ALCAM-201ENST00000306107 MAP3K1Q13233 1512 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 DUOX2Q9NRD8 1548 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 PSMA5P28066 241 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 EXOC6BQ9Y2D4 811 aa16.85■□□□□ 0.29
ALCAM-201ENST00000306107 DNAAF4Q8WXU2 420 aa16.84■□□□□ 0.29
ALCAM-201ENST00000306107 IFT57Q9NWB7 429 aa16.84■□□□□ 0.29
ALCAM-201ENST00000306107 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
ALCAM-201ENST00000306107 SETDB2Q96T68 719 aa16.84■□□□□ 0.29
ALCAM-201ENST00000306107 CRACR2BQ8N4Y2 399 aaPredicted RBP16.83■□□□□ 0.28
ALCAM-201ENST00000306107 GCC1Q96CN9 775 aa16.83■□□□□ 0.28
ALCAM-201ENST00000306107 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.28
ALCAM-201ENST00000306107 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
ALCAM-201ENST00000306107 FAM98CQ17RN3 349 aaKnown RBP16.82■□□□□ 0.28
ALCAM-201ENST00000306107 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
ALCAM-201ENST00000306107 LDHAL6AQ6ZMR3 332 aa16.82■□□□□ 0.28
ALCAM-201ENST00000306107 DZIP1Q86YF9 867 aaKnown RBP16.82■□□□□ 0.28
ALCAM-201ENST00000306107 KIAA0556O60303 1618 aa16.82■□□□□ 0.28
ALCAM-201ENST00000306107 BECN2A8MW95 431 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 ST5P78524 1137 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 WDR78Q5VTH9 848 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 AKAP2Q9Y2D5 859 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 CDC5LQ99459 802 aaKnown RBP16.81■□□□□ 0.28
ALCAM-201ENST00000306107 GRM1Q13255 1194 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 USP21Q9UK80 565 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
ALCAM-201ENST00000306107 NUP133Q8WUM0 1156 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 JARID2Q92833 1246 aaPredicted RBP16.81■□□□□ 0.28
ALCAM-201ENST00000306107 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
ALCAM-201ENST00000306107 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
ALCAM-201ENST00000306107 MPHOSPH10O00566 681 aaKnown RBP16.8■□□□□ 0.28
ALCAM-201ENST00000306107 USP5P45974 858 aa16.8■□□□□ 0.28
ALCAM-201ENST00000306107 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 NFATC2IPQ8NCF5 419 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 SSH1Q8WYL5 1049 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 MVPQ14764 893 aaKnown RBP16.79■□□□□ 0.28
ALCAM-201ENST00000306107 TMEM132AQ24JP5 1023 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 PI4KAP2A4QPH2 592 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
ALCAM-201ENST00000306107 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
ALCAM-201ENST00000306107 PI4KAP1Q8N8J0 262 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
ALCAM-201ENST00000306107 MSNP26038 577 aaKnown RBP16.79■□□□□ 0.28
ALCAM-201ENST00000306107 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
ALCAM-201ENST00000306107 FLIIQ13045 1269 aa16.79■□□□□ 0.28
ALCAM-201ENST00000306107 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
ALCAM-201ENST00000306107 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 NEK4P51957 841 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
ALCAM-201ENST00000306107 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
ALCAM-201ENST00000306107 LTKP29376 864 aa16.77■□□□□ 0.28
ALCAM-201ENST00000306107 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
ALCAM-201ENST00000306107 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
ALCAM-201ENST00000306107 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.28
ALCAM-201ENST00000306107 NUTM1Q86Y26 1132 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms