RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
TRIM35-201ENST00000305364 MAP4K4O95819 1239 aaPredicted RBP15.65■□□□□ 0.1
TRIM35-201ENST00000305364 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
TRIM35-201ENST00000305364 UVSSAQ2YD98 709 aa15.65■□□□□ 0.1
TRIM35-201ENST00000305364 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 GIMAP6Q6P9H5 292 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 PDLIM2Q96JY6 352 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 TRAPPC8Q9Y2L5 1435 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 GOLGA6L19H0YKK7 550 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 LRRCC1Q9C099 1032 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 CGNQ9P2M7 1197 aaKnown RBP15.64■□□□□ 0.09
TRIM35-201ENST00000305364 ANKRD44Q8N8A2 993 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 PIBF1Q8WXW3 757 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
TRIM35-201ENST00000305364 MEIS3Q99687 375 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 NAP1L2Q9ULW6 460 aaPredicted RBP15.63■□□□□ 0.09
TRIM35-201ENST00000305364 NCOA3Q9Y6Q9 1424 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 SAMD9LQ8IVG5 1584 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 GADD45BO75293 160 aaPredicted RBP15.63■□□□□ 0.09
TRIM35-201ENST00000305364 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
TRIM35-201ENST00000305364 CNPY2Q9Y2B0 182 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 NPHP1O15259 732 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 NRDCO43847 1150 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 BICD2Q8TD16 824 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 C16orf45Q96MC5 204 aaPredicted RBP15.63■□□□□ 0.09
TRIM35-201ENST00000305364 CDK19Q9BWU1 502 aa15.63■□□□□ 0.09
TRIM35-201ENST00000305364 GNAI2P04899 355 aa15.62■□□□□ 0.09
TRIM35-201ENST00000305364 EMILIN1Q9Y6C2 1016 aa15.62■□□□□ 0.09
TRIM35-201ENST00000305364 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
TRIM35-201ENST00000305364 IL1RAPL2Q9NP60 686 aa15.62■□□□□ 0.09
TRIM35-201ENST00000305364 RTEL1-TNFRSF6BF6WH68 1400 aa15.62■□□□□ 0.09
TRIM35-201ENST00000305364 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
TRIM35-201ENST00000305364 SIRT2Q8IXJ6 389 aa15.62■□□□□ 0.09
TRIM35-201ENST00000305364 GTPBP4Q9BZE4 634 aaKnown RBP15.62■□□□□ 0.09
TRIM35-201ENST00000305364 F6X3S4 739 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 CAMK4Q16566 473 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 BECN2A8MW95 431 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 MX1P20591 662 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 PLEKHF1Q96S99 279 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 TSPYL4Q9UJ04 414 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 PDE1AP54750 535 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 RRS1Q15050 365 aaKnown RBP15.61■□□□□ 0.09
TRIM35-201ENST00000305364 CLEC17AQ6ZS10 378 aa15.61■□□□□ 0.09
TRIM35-201ENST00000305364 TAOK2Q9UL54 1235 aa15.6■□□□□ 0.09
TRIM35-201ENST00000305364 LAMC1P11047 1609 aa15.6■□□□□ 0.09
TRIM35-201ENST00000305364 U2AF2P26368 475 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRIM35-201ENST00000305364 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 SULT6B1Q6IMI4 303 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 MIS18AQ9NYP9 233 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 PLXNC1O60486 1568 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 UBE2HP62256 183 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 FERMT3Q86UX7 667 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 BCL2L12Q9HB09 334 aa15.59■□□□□ 0.09
TRIM35-201ENST00000305364 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.09
TRIM35-201ENST00000305364 SURF6O75683 361 aaKnown RBP15.58■□□□□ 0.09
TRIM35-201ENST00000305364 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.09
TRIM35-201ENST00000305364 KRT24Q2M2I5 525 aa15.58■□□□□ 0.09
TRIM35-201ENST00000305364 MCM10Q7L590 875 aa15.58■□□□□ 0.09
TRIM35-201ENST00000305364 ESYT1Q9BSJ8 1104 aa15.58■□□□□ 0.09
TRIM35-201ENST00000305364 ATP10AO60312 1499 aa15.58■□□□□ 0.09
TRIM35-201ENST00000305364 TTC37Q6PGP7 1564 aa15.58■□□□□ 0.08
TRIM35-201ENST00000305364 BRD1O95696 1058 aa15.58■□□□□ 0.08
TRIM35-201ENST00000305364 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.08
TRIM35-201ENST00000305364 DMTNQ08495 405 aa15.58■□□□□ 0.08
TRIM35-201ENST00000305364 A0A1W2PP64 1363 aa15.58■□□□□ 0.08
TRIM35-201ENST00000305364 RIOK3O14730 519 aaKnown RBP15.57■□□□□ 0.08
TRIM35-201ENST00000305364 STX6O43752 255 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 GNAI3P08754 354 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 BBXQ8WY36 941 aaPredicted RBP15.57■□□□□ 0.08
TRIM35-201ENST00000305364 TNMDQ9H2S6 317 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 KDM4AO75164 1064 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 TNNT1P13805 278 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 CCDC83Q8IWF9 413 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 NUP62CLQ9H1M0 184 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 CCDC66A2RUB6 948 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 FBXW7Q969H0 707 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 ERICH4A6NGS2 130 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 TNNT3P45378 269 aaPredicted RBP15.57■□□□□ 0.08
TRIM35-201ENST00000305364 NUTM1Q86Y26 1132 aa15.57■□□□□ 0.08
TRIM35-201ENST00000305364 RPGRIP1LQ68CZ1 1315 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 CCT4P50991 539 aaKnown RBP15.56■□□□□ 0.08
TRIM35-201ENST00000305364 CKAP2LQ8IYA6 745 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 DDX54Q8TDD1 881 aaKnown RBP15.56■□□□□ 0.08
TRIM35-201ENST00000305364 EID1Q9Y6B2 187 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 RUFY2Q8WXA3 655 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 ZDHHC9Q9Y397 364 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 PLCH2O75038 1416 aa15.56■□□□□ 0.08
TRIM35-201ENST00000305364 KIF20AO95235 890 aa15.55■□□□□ 0.08
TRIM35-201ENST00000305364 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 ZSCAN22P10073 491 aaPredicted RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 HSP90B1P14625 803 aaKnown RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 CWC27Q6UX04 472 aaKnown RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 INTS4Q96HW7 963 aaKnown RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 H3BQV1 296 aa15.55■□□□□ 0.08
TRIM35-201ENST00000305364 DTNBO60941 627 aa15.55■□□□□ 0.08
TRIM35-201ENST00000305364 KRT85P78386 507 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms