RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 DEFB132Q7Z7B7 95 aa22.9■■□□□ 1.26
NDUFA3-201ENST00000303553 EYA1Q99502 592 aa22.9■■□□□ 1.26
NDUFA3-201ENST00000303553 IGSF1Q8N6C5 1336 aa22.88■■□□□ 1.25
NDUFA3-201ENST00000303553 APBA3O96018 575 aa22.88■■□□□ 1.25
NDUFA3-201ENST00000303553 MTHFSP49914 203 aa22.88■■□□□ 1.25
NDUFA3-201ENST00000303553 DDX54Q8TDD1 881 aaKnown RBP22.88■■□□□ 1.25
NDUFA3-201ENST00000303553 BCL11BQ9C0K0 894 aaPredicted RBP22.88■■□□□ 1.25
NDUFA3-201ENST00000303553 PCDH11XQ9BZA7 1347 aa22.87■■□□□ 1.25
NDUFA3-201ENST00000303553 PCDH11YQ9BZA8 1340 aa22.87■■□□□ 1.25
NDUFA3-201ENST00000303553 CNGB1Q14028 1251 aaPredicted RBP22.87■■□□□ 1.25
NDUFA3-201ENST00000303553 EN1Q05925 392 aaPredicted RBP22.85■■□□□ 1.25
NDUFA3-201ENST00000303553 DOT1LQ8TEK3 1739 aa22.85■■□□□ 1.25
NDUFA3-201ENST00000303553 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
NDUFA3-201ENST00000303553 RREB1Q92766 1687 aa22.84■■□□□ 1.25
NDUFA3-201ENST00000303553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.83■■□□□ 1.25
NDUFA3-201ENST00000303553 IL13P35225 146 aa22.81■■□□□ 1.24
NDUFA3-201ENST00000303553 CFAP53Q96M91 514 aa22.81■■□□□ 1.24
NDUFA3-201ENST00000303553 KAT6BQ8WYB5 2073 aa22.81■■□□□ 1.24
NDUFA3-201ENST00000303553 PLSCR1O15162 318 aa22.8■■□□□ 1.24
NDUFA3-201ENST00000303553 DIAPH1O60610 1272 aaKnown RBP22.8■■□□□ 1.24
NDUFA3-201ENST00000303553 CAMKK2Q96RR4 588 aa22.8■■□□□ 1.24
NDUFA3-201ENST00000303553 BTAF1O14981 1849 aa22.8■■□□□ 1.24
NDUFA3-201ENST00000303553 KDRP35968 1356 aa22.79■■□□□ 1.24
NDUFA3-201ENST00000303553 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
NDUFA3-201ENST00000303553 ACSBG1Q96GR2 724 aa22.79■■□□□ 1.24
NDUFA3-201ENST00000303553 DDX10Q13206 875 aaKnown RBP22.78■■□□□ 1.24
NDUFA3-201ENST00000303553 COL3A1P02461 1466 aaPredicted RBP22.78■■□□□ 1.24
NDUFA3-201ENST00000303553 NUP188Q5SRE5 1749 aa22.77■■□□□ 1.24
NDUFA3-201ENST00000303553 PPP2R1AP30153 589 aa22.76■■□□□ 1.23
NDUFA3-201ENST00000303553 AMOTQ4VCS5 1084 aa22.76■■□□□ 1.23
NDUFA3-201ENST00000303553 SULT6B1Q6IMI4 303 aa22.76■■□□□ 1.23
NDUFA3-201ENST00000303553 KCNQ2O43526 872 aa22.75■■□□□ 1.23
NDUFA3-201ENST00000303553 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
NDUFA3-201ENST00000303553 CYP27B1O15528 508 aa22.74■■□□□ 1.23
NDUFA3-201ENST00000303553 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
NDUFA3-201ENST00000303553 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
NDUFA3-201ENST00000303553 PTF1AQ7RTS3 328 aa22.73■■□□□ 1.23
NDUFA3-201ENST00000303553 AEBP1Q8IUX7 1158 aa22.72■■□□□ 1.23
NDUFA3-201ENST00000303553 TOGARAM1Q9Y4F4 1720 aa22.71■■□□□ 1.23
NDUFA3-201ENST00000303553 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
NDUFA3-201ENST00000303553 PRIM1P49642 420 aaKnown RBP22.71■■□□□ 1.23
NDUFA3-201ENST00000303553 NKX1-1Q15270 411 aaPredicted RBP22.71■■□□□ 1.23
NDUFA3-201ENST00000303553 RALBP1Q15311 655 aa22.71■■□□□ 1.23
NDUFA3-201ENST00000303553 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
NDUFA3-201ENST00000303553 PHKG2P15735 406 aa22.7■■□□□ 1.22
NDUFA3-201ENST00000303553 NBPF14Q5TI25 921 aa22.7■■□□□ 1.22
NDUFA3-201ENST00000303553 ITGB4P16144 1822 aa22.7■■□□□ 1.22
NDUFA3-201ENST00000303553 U2SURPO15042 1029 aaKnown RBP22.69■■□□□ 1.22
NDUFA3-201ENST00000303553 C1orf141Q5JVX7 400 aa22.68■■□□□ 1.22
NDUFA3-201ENST00000303553 HMOX1P09601 288 aa22.67■■□□□ 1.22
NDUFA3-201ENST00000303553 TXNRD1Q16881 649 aa22.67■■□□□ 1.22
NDUFA3-201ENST00000303553 ZNF530Q6P9A1 599 aaPredicted RBP22.67■■□□□ 1.22
NDUFA3-201ENST00000303553 LY75O60449 1722 aa22.67■■□□□ 1.22
NDUFA3-201ENST00000303553 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
NDUFA3-201ENST00000303553 SLC27A3Q5K4L6 730 aa22.64■■□□□ 1.21
NDUFA3-201ENST00000303553 DCAF5Q96JK2 942 aa22.64■■□□□ 1.21
NDUFA3-201ENST00000303553 HMGB2P26583 209 aaKnown RBP22.63■■□□□ 1.21
NDUFA3-201ENST00000303553 MPRIPQ6WCQ1 1025 aa22.63■■□□□ 1.21
NDUFA3-201ENST00000303553 PROM2Q8N271 834 aa22.62■■□□□ 1.21
NDUFA3-201ENST00000303553 TMOD3Q9NYL9 352 aa22.62■■□□□ 1.21
NDUFA3-201ENST00000303553 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
NDUFA3-201ENST00000303553 AKAP4Q5JQC9 854 aa22.61■■□□□ 1.21
NDUFA3-201ENST00000303553 SMARCC1Q92922 1105 aaPredicted RBP22.61■■□□□ 1.21
NDUFA3-201ENST00000303553 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
NDUFA3-201ENST00000303553 PAPPAQ13219 1627 aa22.6■■□□□ 1.21
NDUFA3-201ENST00000303553 ERVV-2B6SEH9 535 aa22.6■■□□□ 1.21
NDUFA3-201ENST00000303553 U2AF1L5P0DN76 240 aaPredicted RBP22.6■■□□□ 1.21
NDUFA3-201ENST00000303553 U2AF1Q01081 240 aaKnown RBP eCLIP22.6■■□□□ 1.21
NDUFA3-201ENST00000303553 R3HDM1Q15032 1099 aaKnown RBP22.6■■□□□ 1.21
NDUFA3-201ENST00000303553 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
NDUFA3-201ENST00000303553 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
NDUFA3-201ENST00000303553 KDM6AO15550 1401 aaPredicted RBP22.58■■□□□ 1.21
NDUFA3-201ENST00000303553 GAS2L2Q8NHY3 880 aa22.58■■□□□ 1.21
NDUFA3-201ENST00000303553 STK32BQ9NY57 414 aa22.58■■□□□ 1.21
NDUFA3-201ENST00000303553 PALLDQ8WX93 1383 aa22.58■■□□□ 1.21
NDUFA3-201ENST00000303553 FCHSD2O94868 740 aa22.57■■□□□ 1.2
NDUFA3-201ENST00000303553 PIGBQ92521 554 aa22.57■■□□□ 1.2
NDUFA3-201ENST00000303553 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
NDUFA3-201ENST00000303553 CCNL1Q9UK58 526 aaPredicted RBP22.56■■□□□ 1.2
NDUFA3-201ENST00000303553 NEFMP07197 916 aa22.55■■□□□ 1.2
NDUFA3-201ENST00000303553 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
NDUFA3-201ENST00000303553 CABP4P57796 275 aa22.55■■□□□ 1.2
NDUFA3-201ENST00000303553 MTHFSDQ2M296 383 aaKnown RBP22.55■■□□□ 1.2
NDUFA3-201ENST00000303553 C5P01031 1676 aa22.55■■□□□ 1.2
NDUFA3-201ENST00000303553 ADAMTS7Q9UKP4 1686 aa22.55■■□□□ 1.2
NDUFA3-201ENST00000303553 PRKRIP1Q9H875 184 aaPredicted RBP22.54■■□□□ 1.2
NDUFA3-201ENST00000303553 ANO8Q9HCE9 1232 aaPredicted RBP22.54■■□□□ 1.2
NDUFA3-201ENST00000303553 LRP5O75197 1615 aa22.53■■□□□ 1.2
NDUFA3-201ENST00000303553 SLC15A2Q16348 729 aa22.53■■□□□ 1.2
NDUFA3-201ENST00000303553 PNNQ9H307 717 aaKnown RBP22.53■■□□□ 1.2
NDUFA3-201ENST00000303553 LRRC4BQ9NT99 713 aa22.53■■□□□ 1.2
NDUFA3-201ENST00000303553 QSER1Q2KHR3 1735 aa22.53■■□□□ 1.2
NDUFA3-201ENST00000303553 MRC1P22897 1456 aa22.53■■□□□ 1.2
NDUFA3-201ENST00000303553 MAP3K5Q99683 1374 aa22.52■■□□□ 1.2
NDUFA3-201ENST00000303553 TAF1LQ8IZX4 1826 aa22.52■■□□□ 1.2
NDUFA3-201ENST00000303553 ZNF831Q5JPB2 1677 aa22.5■■□□□ 1.19
NDUFA3-201ENST00000303553 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
NDUFA3-201ENST00000303553 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
NDUFA3-201ENST00000303553 RNMTO43148 476 aaKnown RBP22.48■■□□□ 1.19
NDUFA3-201ENST00000303553 SLC52A2Q9HAB3 445 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms