RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 ATP10DQ9P241 1426 aa9.36□□□□□ -0.91
ITGB1-201ENST00000302278 WDR90Q96KV7 1748 aa9.36□□□□□ -0.91
ITGB1-201ENST00000302278 POLD1P28340 1107 aa9.35□□□□□ -0.91
ITGB1-201ENST00000302278 CGNL1Q0VF96 1302 aa9.35□□□□□ -0.91
ITGB1-201ENST00000302278 IP6K1Q92551 441 aa9.35□□□□□ -0.91
ITGB1-201ENST00000302278 YBX3P16989 372 aaKnown RBP eCLIP9.35□□□□□ -0.917e-8■□□□□ 10.7
ITGB1-201ENST00000302278 ANKRD24Q8TF21 1146 aa9.35□□□□□ -0.91
ITGB1-201ENST00000302278 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
ITGB1-201ENST00000302278 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
ITGB1-201ENST00000302278 KIF24Q5T7B8 1368 aa9.34□□□□□ -0.91
ITGB1-201ENST00000302278 A0A1W2PP64 1363 aa9.34□□□□□ -0.91
ITGB1-201ENST00000302278 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
ITGB1-201ENST00000302278 NLGN2Q8NFZ4 835 aa9.33□□□□□ -0.92
ITGB1-201ENST00000302278 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
ITGB1-201ENST00000302278 UTRNP46939 3433 aa9.33□□□□□ -0.92
ITGB1-201ENST00000302278 ACSBG1Q96GR2 724 aa9.33□□□□□ -0.92
ITGB1-201ENST00000302278 TNRC6CQ9HCJ0 1690 aaKnown RBP9.33□□□□□ -0.92
ITGB1-201ENST00000302278 GPR162Q16538 588 aa9.32□□□□□ -0.92
ITGB1-201ENST00000302278 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
ITGB1-201ENST00000302278 C4AP0C0L4 1744 aa9.32□□□□□ -0.92
ITGB1-201ENST00000302278 C10orf71Q711Q0 1435 aa9.32□□□□□ -0.92
ITGB1-201ENST00000302278 DLEC1Q9Y238 1755 aa9.31□□□□□ -0.92
ITGB1-201ENST00000302278 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
ITGB1-201ENST00000302278 NME9Q86XW9 330 aa9.31□□□□□ -0.92
ITGB1-201ENST00000302278 FLAD1Q8NFF5 587 aa9.31□□□□□ -0.92
ITGB1-201ENST00000302278 ADAMTS7Q9UKP4 1686 aa9.3□□□□□ -0.92
ITGB1-201ENST00000302278 HSPA6P17066 643 aa9.3□□□□□ -0.92
ITGB1-201ENST00000302278 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
ITGB1-201ENST00000302278 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-201ENST00000302278 N4BP2Q86UW6 1770 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-201ENST00000302278 HOXC9P31274 260 aa9.29□□□□□ -0.92
ITGB1-201ENST00000302278 TFCP2L1Q9NZI6 479 aa9.28□□□□□ -0.92
ITGB1-201ENST00000302278 USP47Q96K76 1375 aa9.28□□□□□ -0.92
ITGB1-201ENST00000302278 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-201ENST00000302278 NRXN2Q9P2S2 1712 aa9.28□□□□□ -0.92
ITGB1-201ENST00000302278 SBF1O95248 1867 aa9.27□□□□□ -0.93
ITGB1-201ENST00000302278 INSRP06213 1382 aa9.27□□□□□ -0.93
ITGB1-201ENST00000302278 ZCRB1Q8TBF4 217 aaKnown RBP9.27□□□□□ -0.93
ITGB1-201ENST00000302278 CCNL1Q9UK58 526 aaPredicted RBP9.27□□□□□ -0.93
ITGB1-201ENST00000302278 MAP3K19Q56UN5 1328 aa9.27□□□□□ -0.93
ITGB1-201ENST00000302278 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
ITGB1-201ENST00000302278 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.93
ITGB1-201ENST00000302278 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
ITGB1-201ENST00000302278 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
ITGB1-201ENST00000302278 KIF3CO14782 793 aa9.26□□□□□ -0.93
ITGB1-201ENST00000302278 PCDH11XQ9BZA7 1347 aa9.26□□□□□ -0.93
ITGB1-201ENST00000302278 PCDH11YQ9BZA8 1340 aa9.26□□□□□ -0.93
ITGB1-201ENST00000302278 KDRP35968 1356 aa9.26□□□□□ -0.93
ITGB1-201ENST00000302278 PALLDQ8WX93 1383 aa9.26□□□□□ -0.93
ITGB1-201ENST00000302278 TJP1Q07157 1748 aa9.25□□□□□ -0.93
ITGB1-201ENST00000302278 SMG6Q86US8 1419 aaKnown RBP9.25□□□□□ -0.93
ITGB1-201ENST00000302278 SLC24A1O60721 1099 aa9.25□□□□□ -0.93
ITGB1-201ENST00000302278 TESK2Q96S53 571 aa9.25□□□□□ -0.93
ITGB1-201ENST00000302278 TONSLQ96HA7 1378 aa9.25□□□□□ -0.93
ITGB1-201ENST00000302278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.24□□□□□ -0.939e-7■■■□□ 17.5
ITGB1-201ENST00000302278 DNAJC5GQ8N7S2 189 aa9.24□□□□□ -0.93
ITGB1-201ENST00000302278 SSFA2P28290 1259 aa9.24□□□□□ -0.93
ITGB1-201ENST00000302278 KAT6BQ8WYB5 2073 aa9.24□□□□□ -0.93
ITGB1-201ENST00000302278 SLC12A5Q9H2X9 1139 aa9.24□□□□□ -0.93
ITGB1-201ENST00000302278 APLP1P51693 650 aa9.23□□□□□ -0.93
ITGB1-201ENST00000302278 GPBP1L1Q9HC44 474 aaPredicted RBP9.23□□□□□ -0.93
ITGB1-201ENST00000302278 VIRMAQ69YN4 1812 aaKnown RBP9.23□□□□□ -0.93
ITGB1-201ENST00000302278 SOX12O15370 315 aa9.23□□□□□ -0.93
ITGB1-201ENST00000302278 FLT4P35916 1363 aa9.23□□□□□ -0.93
ITGB1-201ENST00000302278 IGSF1Q8N6C5 1336 aa9.23□□□□□ -0.93
ITGB1-201ENST00000302278 DDX54Q8TDD1 881 aaKnown RBP9.23□□□□□ -0.93
ITGB1-201ENST00000302278 SMARCC1Q92922 1105 aaPredicted RBP9.23□□□□□ -0.93
ITGB1-201ENST00000302278 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
ITGB1-201ENST00000302278 NBPF6Q5VWK0 638 aa9.22□□□□□ -0.93
ITGB1-201ENST00000302278 NBPF4Q96M43 638 aa9.22□□□□□ -0.93
ITGB1-201ENST00000302278 JMYQ8N9B5 988 aa9.22□□□□□ -0.93
ITGB1-201ENST00000302278 KDM6AO15550 1401 aaPredicted RBP9.21□□□□□ -0.93
ITGB1-201ENST00000302278 SCN11AQ9UI33 1791 aa9.21□□□□□ -0.93
ITGB1-201ENST00000302278 COG3Q96JB2 828 aa9.21□□□□□ -0.93
ITGB1-201ENST00000302278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.21□□□□□ -0.935e-9■□□□□ 11.3
ITGB1-201ENST00000302278 ARFGEF2Q9Y6D5 1785 aa9.21□□□□□ -0.93
ITGB1-201ENST00000302278 CEP350Q5VT06 3117 aa9.21□□□□□ -0.94
ITGB1-201ENST00000302278 AMIGO3Q86WK7 504 aa9.21□□□□□ -0.94
ITGB1-201ENST00000302278 DICER1Q9UPY3 1922 aaKnown RBP9.21□□□□□ -0.94
ITGB1-201ENST00000302278 KCNQ4P56696 695 aa9.2□□□□□ -0.94
ITGB1-201ENST00000302278 MYH14Q7Z406 1995 aaKnown RBP9.2□□□□□ -0.94
ITGB1-201ENST00000302278 TGFB2P61812 414 aa9.2□□□□□ -0.94
ITGB1-201ENST00000302278 AFDNP55196 1824 aaKnown RBP9.2□□□□□ -0.94
ITGB1-201ENST00000302278 CYP27B1O15528 508 aa9.19□□□□□ -0.94
ITGB1-201ENST00000302278 UBR2Q8IWV8 1755 aa9.19□□□□□ -0.94
ITGB1-201ENST00000302278 RBM46Q8TBY0 533 aaKnown RBP9.19□□□□□ -0.94
ITGB1-201ENST00000302278 TOMM70O94826 608 aa9.19□□□□□ -0.94
ITGB1-201ENST00000302278 TATP17735 454 aaPredicted RBP9.18□□□□□ -0.94
ITGB1-201ENST00000302278 PELP1Q8IZL8 1130 aaKnown RBP9.18□□□□□ -0.94
ITGB1-201ENST00000302278 CARD11Q9BXL7 1154 aa9.18□□□□□ -0.94
ITGB1-201ENST00000302278 FYB1O15117 783 aa9.18□□□□□ -0.94
ITGB1-201ENST00000302278 GOLGB1Q14789 3259 aaKnown RBP9.18□□□□□ -0.94
ITGB1-201ENST00000302278 LINC00116Q8NCU8 138 aa9.18□□□□□ -0.94
ITGB1-201ENST00000302278 SIN3AQ96ST3 1273 aa9.18□□□□□ -0.94
ITGB1-201ENST00000302278 AMPHP49418 695 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 MSL1Q68DK7 614 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 MRC1P22897 1456 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 ADRA2BP18089 450 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 FSTL1Q12841 308 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms