RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 TTC21AQ8NDW8 1320 aa30■■■□□ 2.39
FOXA3-201ENST00000302177 TBC1D9Q6ZT07 1266 aa29.98■■■□□ 2.39
FOXA3-201ENST00000302177 SPRYD3Q8NCJ5 442 aa29.98■■■□□ 2.39
FOXA3-201ENST00000302177 ANKRD44Q8N8A2 993 aa29.97■■■□□ 2.39
FOXA3-201ENST00000302177 ARHGEF10O15013 1369 aa29.97■■■□□ 2.39
FOXA3-201ENST00000302177 CDC45O75419 566 aa29.97■■■□□ 2.39
FOXA3-201ENST00000302177 RGS12O14924 1447 aa29.97■■■□□ 2.39
FOXA3-201ENST00000302177 STRCQ7RTU9 1775 aa29.97■■■□□ 2.39
FOXA3-201ENST00000302177 KIF2CQ99661 725 aa29.96■■■□□ 2.39
FOXA3-201ENST00000302177 LTKP29376 864 aa29.95■■■□□ 2.39
FOXA3-201ENST00000302177 PEAK1Q9H792 1746 aa29.95■■■□□ 2.39
FOXA3-201ENST00000302177 CRB1P82279 1406 aa29.94■■■□□ 2.38
FOXA3-201ENST00000302177 HSP90AB2PQ58FF8 381 aa29.94■■■□□ 2.38
FOXA3-201ENST00000302177 DDX11L8A8MPP1 907 aa29.94■■■□□ 2.38
FOXA3-201ENST00000302177 PLEKHM2Q8IWE5 1019 aa29.94■■■□□ 2.38
FOXA3-201ENST00000302177 ANKLE2Q86XL3 938 aa29.92■■■□□ 2.38
FOXA3-201ENST00000302177 EID1Q9Y6B2 187 aa29.92■■■□□ 2.38
FOXA3-201ENST00000302177 ATP10DQ9P241 1426 aa29.91■■■□□ 2.38
FOXA3-201ENST00000302177 MCM10Q7L590 875 aa29.91■■■□□ 2.38
FOXA3-201ENST00000302177 PTPRUQ92729 1446 aa29.91■■■□□ 2.38
FOXA3-201ENST00000302177 TBX22Q9Y458 520 aa29.9■■■□□ 2.38
FOXA3-201ENST00000302177 SBNO1A3KN83 1393 aa29.9■■■□□ 2.38
FOXA3-201ENST00000302177 KDRP35968 1356 aa29.89■■■□□ 2.38
FOXA3-201ENST00000302177 SLIT1O75093 1534 aa29.89■■■□□ 2.37
FOXA3-201ENST00000302177 HSP90AB1P08238 724 aaKnown RBP29.88■■■□□ 2.37
FOXA3-201ENST00000302177 TTC22Q5TAA0 569 aa29.88■■■□□ 2.37
FOXA3-201ENST00000302177 FLT4P35916 1363 aa29.88■■■□□ 2.37
FOXA3-201ENST00000302177 CEP85Q6P2H3 762 aa29.88■■■□□ 2.37
FOXA3-201ENST00000302177 ARHGAP23Q9P227 1491 aa29.87■■■□□ 2.37
FOXA3-201ENST00000302177 TRAK2O60296 914 aa29.87■■■□□ 2.37
FOXA3-201ENST00000302177 GSPT1P15170 499 aaKnown RBP29.87■■■□□ 2.37
FOXA3-201ENST00000302177 RTL1A6NKG5 1358 aa29.87■■■□□ 2.37
FOXA3-201ENST00000302177 MAP3K19Q56UN5 1328 aa29.86■■■□□ 2.37
FOXA3-201ENST00000302177 FSD2A1L4K1 749 aa29.86■■■□□ 2.37
FOXA3-201ENST00000302177 RTN4Q9NQC3 1192 aaKnown RBP29.86■■■□□ 2.37
FOXA3-201ENST00000302177 K7ELQ4 463 aaPredicted RBP29.85■■■□□ 2.37
FOXA3-201ENST00000302177 HTATSF1O43719 755 aaKnown RBP29.85■■■□□ 2.37
FOXA3-201ENST00000302177 PTMSP20962 102 aa29.85■■■□□ 2.37
FOXA3-201ENST00000302177 KRT24Q2M2I5 525 aa29.85■■■□□ 2.37
FOXA3-201ENST00000302177 RTF1Q92541 710 aaKnown RBP29.84■■■□□ 2.37
FOXA3-201ENST00000302177 AMOTL2Q9Y2J4 779 aa29.84■■■□□ 2.37
FOXA3-201ENST00000302177 FMN2Q9NZ56 1722 aa29.83■■■□□ 2.37
FOXA3-201ENST00000302177 GOLGA6L3A6NEY3 463 aa29.83■■■□□ 2.37
FOXA3-201ENST00000302177 SLC4A2P04920 1241 aa29.83■■■□□ 2.37
FOXA3-201ENST00000302177 RAB3GAP1Q15042 981 aa29.83■■■□□ 2.37
FOXA3-201ENST00000302177 FAM43AQ8N2R8 423 aa29.83■■■□□ 2.37
FOXA3-201ENST00000302177 GAS2L2Q8NHY3 880 aa29.83■■■□□ 2.37
FOXA3-201ENST00000302177 MTHFSDQ2M296 383 aaKnown RBP29.82■■■□□ 2.36
FOXA3-201ENST00000302177 ISY1Q9ULR0 285 aaKnown RBP29.82■■■□□ 2.36
FOXA3-201ENST00000302177 NUTM2FA1L443 756 aa29.81■■■□□ 2.36
FOXA3-201ENST00000302177 GBP4Q96PP9 640 aa29.81■■■□□ 2.36
FOXA3-201ENST00000302177 SLC26A8Q96RN1 970 aa29.81■■■□□ 2.36
FOXA3-201ENST00000302177 IGSF1Q8N6C5 1336 aa29.81■■■□□ 2.36
FOXA3-201ENST00000302177 MSH6P52701 1360 aa29.81■■■□□ 2.36
FOXA3-201ENST00000302177 HMMRO75330 724 aa29.81■■■□□ 2.36
FOXA3-201ENST00000302177 CCT4P50991 539 aaKnown RBP29.81■■■□□ 2.36
FOXA3-201ENST00000302177 DIP2AQ14689 1571 aa29.8■■■□□ 2.36
FOXA3-201ENST00000302177 RABEP1Q15276 862 aa29.79■■■□□ 2.36
FOXA3-201ENST00000302177 TNPO1Q92973 898 aaKnown RBP29.79■■■□□ 2.36
FOXA3-201ENST00000302177 SOS1Q07889 1333 aaPredicted RBP29.78■■■□□ 2.36
FOXA3-201ENST00000302177 TSPYL4Q9UJ04 414 aa29.78■■■□□ 2.36
FOXA3-201ENST00000302177 CASC1Q6TDU7 716 aa29.77■■■□□ 2.36
FOXA3-201ENST00000302177 MEIS3Q99687 375 aa29.77■■■□□ 2.36
FOXA3-201ENST00000302177 SKOR2Q2VWA4 1001 aaPredicted RBP29.77■■■□□ 2.36
FOXA3-201ENST00000302177 NGDNQ8NEJ9 315 aaKnown RBP29.77■■■□□ 2.36
FOXA3-201ENST00000302177 ANKARQ7Z5J8 1434 aa29.76■■■□□ 2.35
FOXA3-201ENST00000302177 HSP90AA1P07900 732 aaKnown RBP29.75■■■□□ 2.35
FOXA3-201ENST00000302177 C16orf71Q8IYS4 520 aaPredicted RBP29.75■■■□□ 2.35
FOXA3-201ENST00000302177 EYA1Q99502 592 aa29.75■■■□□ 2.35
FOXA3-201ENST00000302177 USP26Q9BXU7 913 aa29.75■■■□□ 2.35
FOXA3-201ENST00000302177 AMPHP49418 695 aa29.75■■■□□ 2.35
FOXA3-201ENST00000302177 OSBPL3Q9H4L5 887 aa29.75■■■□□ 2.35
FOXA3-201ENST00000302177 NPHP4O75161 1426 aaPredicted RBP29.74■■■□□ 2.35
FOXA3-201ENST00000302177 CD2BP2O95400 341 aaKnown RBP29.74■■■□□ 2.35
FOXA3-201ENST00000302177 CLEC17AQ6ZS10 378 aa29.74■■■□□ 2.35
FOXA3-201ENST00000302177 BABAM1Q9NWV8 329 aa29.73■■■□□ 2.35
FOXA3-201ENST00000302177 FOXO3O43524 673 aa29.72■■■□□ 2.35
FOXA3-201ENST00000302177 XRCC6P12956 609 aaKnown RBP eCLIP29.72■■■□□ 2.35
FOXA3-201ENST00000302177 SDSP20132 328 aa29.71■■■□□ 2.35
FOXA3-201ENST00000302177 MRE11P49959 708 aa29.71■■■□□ 2.35
FOXA3-201ENST00000302177 RBM42Q9BTD8 480 aaKnown RBP29.71■■■□□ 2.35
FOXA3-201ENST00000302177 STK31Q9BXU1 1019 aa29.7■■■□□ 2.35
FOXA3-201ENST00000302177 PIK3C2AO00443 1686 aa29.7■■■□□ 2.35
FOXA3-201ENST00000302177 SOX12O15370 315 aa29.7■■■□□ 2.34
FOXA3-201ENST00000302177 MIS18AQ9NYP9 233 aa29.7■■■□□ 2.34
FOXA3-201ENST00000302177 LRRC37A3O60309 1634 aa29.69■■■□□ 2.34
FOXA3-201ENST00000302177 USP54Q70EL1 1684 aa29.69■■■□□ 2.34
FOXA3-201ENST00000302177 ZNF335Q9H4Z2 1342 aaPredicted RBP29.68■■■□□ 2.34
FOXA3-201ENST00000302177 REC8O95072 547 aa29.68■■■□□ 2.34
FOXA3-201ENST00000302177 GNAI2P04899 355 aa29.68■■■□□ 2.34
FOXA3-201ENST00000302177 CCDC30Q5VVM6 783 aa29.68■■■□□ 2.34
FOXA3-201ENST00000302177 G2E3Q7L622 706 aa29.68■■■□□ 2.34
FOXA3-201ENST00000302177 GZF1Q9H116 711 aaPredicted RBP29.68■■■□□ 2.34
FOXA3-201ENST00000302177 GNAT3A8MTJ3 354 aa29.67■■■□□ 2.34
FOXA3-201ENST00000302177 OTUD7AQ8TE49 926 aaPredicted RBP29.67■■■□□ 2.34
FOXA3-201ENST00000302177 XRN1Q8IZH2 1706 aaKnown RBP29.67■■■□□ 2.34
FOXA3-201ENST00000302177 GNAI3P08754 354 aa29.65■■■□□ 2.34
FOXA3-201ENST00000302177 NLRP6P59044 892 aa29.65■■■□□ 2.34
FOXA3-201ENST00000302177 SMARCA5O60264 1052 aaPredicted RBP29.64■■■□□ 2.34
FOXA3-201ENST00000302177 RGPD8O14715 1765 aaPredicted RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms