RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 ARHGEF12Q9NZN5 1544 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 TESK2Q96S53 571 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 CFAP45Q9UL16 551 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 ATP10BO94823 1461 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 BTBD11A6QL63 1104 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 SMC2O95347 1197 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
TSR1-201ENST00000301364 STK3Q13188 491 aa22.93■■□□□ 1.26
TSR1-201ENST00000301364 SPATA32Q96LK8 384 aa22.93■■□□□ 1.26
TSR1-201ENST00000301364 DUOX2Q9NRD8 1548 aa22.93■■□□□ 1.26
TSR1-201ENST00000301364 SYCE3A1L190 88 aa22.92■■□□□ 1.26
TSR1-201ENST00000301364 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
TSR1-201ENST00000301364 NUP62CLQ9H1M0 184 aa22.92■■□□□ 1.26
TSR1-201ENST00000301364 ACBD3Q9H3P7 528 aa22.92■■□□□ 1.26
TSR1-201ENST00000301364 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
TSR1-201ENST00000301364 TBC1D9Q6ZT07 1266 aa22.92■■□□□ 1.26
TSR1-201ENST00000301364 SPG7Q9UQ90 795 aa22.92■■□□□ 1.26
TSR1-201ENST00000301364 CEBPZQ03701 1054 aaKnown RBP22.92■■□□□ 1.26
TSR1-201ENST00000301364 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.92■■□□□ 1.265e-6■■■■■ 34.6
TSR1-201ENST00000301364 MIS18AQ9NYP9 233 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 NUTM1Q86Y26 1132 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 PDILTQ8N807 584 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 PCDHB15Q9Y5E8 787 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 SSFA2P28290 1259 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 ME1P48163 572 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 FMNL2Q96PY5 1086 aa22.91■■□□□ 1.26
TSR1-201ENST00000301364 KIF6Q6ZMV9 814 aa22.9■■□□□ 1.26
TSR1-201ENST00000301364 FANCAO15360 1455 aa22.9■■□□□ 1.26
TSR1-201ENST00000301364 TAF7Q15545 349 aaPredicted RBP22.9■■□□□ 1.26
TSR1-201ENST00000301364 C8orf34Q49A92 452 aa22.9■■□□□ 1.26
TSR1-201ENST00000301364 TTC39AQ5SRH9 613 aa22.9■■□□□ 1.26
TSR1-201ENST00000301364 RRP9O43818 475 aaKnown RBP22.9■■□□□ 1.26
TSR1-201ENST00000301364 UPF3BQ9BZI7 483 aaKnown RBP22.9■■□□□ 1.26
TSR1-201ENST00000301364 CASTP20810 708 aaKnown RBP22.9■■□□□ 1.26
TSR1-201ENST00000301364 NUCB1Q02818 461 aa22.89■■□□□ 1.26
TSR1-201ENST00000301364 PIK3C2GO75747 1445 aa22.89■■□□□ 1.25
TSR1-201ENST00000301364 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
TSR1-201ENST00000301364 RBM10P98175 930 aaKnown RBP22.89■■□□□ 1.25
TSR1-201ENST00000301364 CABP4P57796 275 aa22.88■■□□□ 1.25
TSR1-201ENST00000301364 SH2B1Q9NRF2 756 aaPredicted RBP22.88■■□□□ 1.25
TSR1-201ENST00000301364 PER1O15534 1290 aaPredicted RBP22.87■■□□□ 1.25
TSR1-201ENST00000301364 KCNH5Q8NCM2 988 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 CTNNA3Q9UI47 895 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 KDM5BQ9UGL1 1544 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 UQCRHLA0A096LP55 91 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 PLCH2O75038 1416 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 UQCRHP07919 91 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
TSR1-201ENST00000301364 HSP90B2PQ58FF3 399 aa22.87■■□□□ 1.25
TSR1-201ENST00000301364 FILIP1LQ4L180 1135 aa22.86■■□□□ 1.25
TSR1-201ENST00000301364 MAP3K11Q16584 847 aa22.86■■□□□ 1.25
TSR1-201ENST00000301364 CCDC112Q8NEF3 446 aa22.86■■□□□ 1.25
TSR1-201ENST00000301364 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
TSR1-201ENST00000301364 MBIPQ9NS73 344 aa22.86■■□□□ 1.25
TSR1-201ENST00000301364 SHANK2Q9UPX8 1470 aa22.86■■□□□ 1.25
TSR1-201ENST00000301364 MYL6BP14649 208 aa22.85■■□□□ 1.25
TSR1-201ENST00000301364 TTC21BQ7Z4L5 1316 aa22.85■■□□□ 1.25
TSR1-201ENST00000301364 WDR62O43379 1518 aa22.85■■□□□ 1.25
TSR1-201ENST00000301364 ZSCAN25Q6NSZ9 544 aa22.85■■□□□ 1.25
TSR1-201ENST00000301364 CEP57L1Q8IYX8 460 aa22.85■■□□□ 1.25
TSR1-201ENST00000301364 CCDC183Q5T5S1 534 aa22.84■■□□□ 1.25
TSR1-201ENST00000301364 F6X3S4 739 aa22.84■■□□□ 1.25
TSR1-201ENST00000301364 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
TSR1-201ENST00000301364 CNNM1Q9NRU3 951 aa22.84■■□□□ 1.25
TSR1-201ENST00000301364 PIP4K2AP48426 406 aaPredicted RBP22.84■■□□□ 1.25
TSR1-201ENST00000301364 TTC22Q5TAA0 569 aa22.84■■□□□ 1.25
TSR1-201ENST00000301364 MPNDQ8N594 471 aa22.84■■□□□ 1.25
TSR1-201ENST00000301364 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
TSR1-201ENST00000301364 SCAND2PQ9GZW5 306 aaPredicted RBP22.83■■□□□ 1.25
TSR1-201ENST00000301364 CEP126Q9P2H0 1117 aa22.83■■□□□ 1.25
TSR1-201ENST00000301364 CCDC57Q2TAC2 916 aa22.83■■□□□ 1.24
TSR1-201ENST00000301364 KLHL40Q2TBA0 621 aa22.83■■□□□ 1.24
TSR1-201ENST00000301364 TRIM22Q8IYM9 498 aa22.83■■□□□ 1.24
TSR1-201ENST00000301364 BAG4O95429 457 aaKnown RBP22.82■■□□□ 1.24
TSR1-201ENST00000301364 ATP2B1P20020 1258 aa22.82■■□□□ 1.24
TSR1-201ENST00000301364 LIMCH1Q9UPQ0 1083 aa22.82■■□□□ 1.24
TSR1-201ENST00000301364 CCDC83Q8IWF9 413 aa22.82■■□□□ 1.24
TSR1-201ENST00000301364 SMARCE1Q969G3 411 aa22.82■■□□□ 1.24
TSR1-201ENST00000301364 SERPINC1P01008 464 aa22.82■■□□□ 1.24
TSR1-201ENST00000301364 FLIIQ13045 1269 aa22.82■■□□□ 1.24
TSR1-201ENST00000301364 CDKL5O76039 1030 aa22.81■■□□□ 1.24
TSR1-201ENST00000301364 ANKLE2Q86XL3 938 aa22.81■■□□□ 1.24
TSR1-201ENST00000301364 DACH1Q9UI36 760 aa22.81■■□□□ 1.24
TSR1-201ENST00000301364 PRPF40BQ6NWY9 871 aaKnown RBP22.81■■□□□ 1.24
TSR1-201ENST00000301364 LRRFIP2Q9Y608 721 aaKnown RBP22.81■■□□□ 1.24
TSR1-201ENST00000301364 NACAP1Q9BZK3 213 aa22.81■■□□□ 1.24
TSR1-201ENST00000301364 LARP1Q6PKG0 1096 aaKnown RBP22.81■■□□□ 1.24
TSR1-201ENST00000301364 PZPP20742 1482 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 FYB1O15117 783 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 TRIM34Q9BYJ4 488 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 POGZQ7Z3K3 1410 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 AMOTQ4VCS5 1084 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 DNAAF4Q8WXU2 420 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 ERCC4Q92889 916 aaPredicted RBP22.8■■□□□ 1.24
TSR1-201ENST00000301364 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
TSR1-201ENST00000301364 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
TSR1-201ENST00000301364 TXLNAP40222 546 aa22.79■■□□□ 1.24
TSR1-201ENST00000301364 SNX21Q969T3 373 aa22.79■■□□□ 1.24
TSR1-201ENST00000301364 CBFA2T2O43439 604 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms