RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 CCDC94Q9BW85 323 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-201ENST00000301050 K7ELQ4 463 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-201ENST00000301050 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
CACNB3-201ENST00000301050 TBX22Q9Y458 520 aa19.59■□□□□ 0.73
CACNB3-201ENST00000301050 TOPAZ1Q8N9V7 1692 aa19.58■□□□□ 0.73
CACNB3-201ENST00000301050 COG3Q96JB2 828 aa19.58■□□□□ 0.73
CACNB3-201ENST00000301050 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.72
CACNB3-201ENST00000301050 DZIP1LQ8IYY4 767 aaKnown RBP19.58■□□□□ 0.72
CACNB3-201ENST00000301050 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.72
CACNB3-201ENST00000301050 ZSCAN20P17040 1043 aaPredicted RBP19.57■□□□□ 0.72
CACNB3-201ENST00000301050 ZSCAN23Q3MJ62 389 aa19.57■□□□□ 0.72
CACNB3-201ENST00000301050 ZKSCAN2Q63HK3 967 aa19.57■□□□□ 0.72
CACNB3-201ENST00000301050 CAVIN1Q6NZI2 390 aaKnown RBP19.57■□□□□ 0.72
CACNB3-201ENST00000301050 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
CACNB3-201ENST00000301050 ACEP12821 1306 aa19.57■□□□□ 0.72
CACNB3-201ENST00000301050 LRRC7Q96NW7 1537 aa19.56■□□□□ 0.72
CACNB3-201ENST00000301050 RRS1Q15050 365 aaKnown RBP19.56■□□□□ 0.72
CACNB3-201ENST00000301050 TRIM35Q9UPQ4 493 aa19.56■□□□□ 0.72
CACNB3-201ENST00000301050 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
CACNB3-201ENST00000301050 MCM5P33992 734 aa19.55■□□□□ 0.72
CACNB3-201ENST00000301050 HMOX1P09601 288 aa19.54■□□□□ 0.72
CACNB3-201ENST00000301050 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
CACNB3-201ENST00000301050 PRIM1P49642 420 aaKnown RBP19.54■□□□□ 0.72
CACNB3-201ENST00000301050 TSR2Q969E8 191 aaKnown RBP19.54■□□□□ 0.72
CACNB3-201ENST00000301050 DIP2AQ14689 1571 aa19.54■□□□□ 0.72
CACNB3-201ENST00000301050 NRKQ7Z2Y5 1582 aa19.54■□□□□ 0.72
CACNB3-201ENST00000301050 PRKAR2BP31323 418 aa19.53■□□□□ 0.72
CACNB3-201ENST00000301050 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
CACNB3-201ENST00000301050 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
CACNB3-201ENST00000301050 PTCH1Q13635 1447 aa19.53■□□□□ 0.72
CACNB3-201ENST00000301050 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.72
CACNB3-201ENST00000301050 AATKQ6ZMQ8 1374 aa19.52■□□□□ 0.71
CACNB3-201ENST00000301050 CDK12Q9NYV4 1490 aaPredicted RBP19.52■□□□□ 0.71
CACNB3-201ENST00000301050 PLEKHG3A1L390 1219 aa19.51■□□□□ 0.71
CACNB3-201ENST00000301050 LMBRD1Q9NUN5 540 aa19.51■□□□□ 0.71
CACNB3-201ENST00000301050 FCHSD2O94868 740 aa19.51■□□□□ 0.71
CACNB3-201ENST00000301050 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
CACNB3-201ENST00000301050 IL13P35225 146 aa19.5■□□□□ 0.71
CACNB3-201ENST00000301050 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
CACNB3-201ENST00000301050 USP6P35125 1406 aa19.5■□□□□ 0.71
CACNB3-201ENST00000301050 RGPD8O14715 1765 aaPredicted RBP19.49■□□□□ 0.71
CACNB3-201ENST00000301050 KCNA6P17658 529 aa19.49■□□□□ 0.71
CACNB3-201ENST00000301050 ITPRIPQ8IWB1 547 aa19.49■□□□□ 0.71
CACNB3-201ENST00000301050 LNPKQ9C0E8 428 aa19.49■□□□□ 0.71
CACNB3-201ENST00000301050 NUCB1Q02818 461 aa19.49■□□□□ 0.71
CACNB3-201ENST00000301050 DDX19BQ9UMR2 479 aa19.49■□□□□ 0.71
CACNB3-201ENST00000301050 TRIM27P14373 513 aa19.48■□□□□ 0.71
CACNB3-201ENST00000301050 PHACTR3Q96KR7 559 aa19.48■□□□□ 0.71
CACNB3-201ENST00000301050 AK9Q5TCS8 1911 aa19.48■□□□□ 0.71
CACNB3-201ENST00000301050 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
CACNB3-201ENST00000301050 BMP2KLQ5H9B9 411 aa19.47■□□□□ 0.71
CACNB3-201ENST00000301050 SOX12O15370 315 aa19.47■□□□□ 0.71
CACNB3-201ENST00000301050 MYRIPQ8NFW9 859 aa19.47■□□□□ 0.71
CACNB3-201ENST00000301050 JARID2Q92833 1246 aaPredicted RBP19.47■□□□□ 0.71
CACNB3-201ENST00000301050 RBM27Q9P2N5 1060 aaKnown RBP19.47■□□□□ 0.71
CACNB3-201ENST00000301050 OVOS2A0A0J9YW53 1432 aa19.46■□□□□ 0.71
CACNB3-201ENST00000301050 OVOS2Q6IE36 1432 aa19.46■□□□□ 0.71
CACNB3-201ENST00000301050 SMC4Q9NTJ3 1288 aa19.45■□□□□ 0.7
CACNB3-201ENST00000301050 ADAMTSL3P82987 1691 aa19.45■□□□□ 0.7
CACNB3-201ENST00000301050 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
CACNB3-201ENST00000301050 GTPBP4Q9BZE4 634 aaKnown RBP19.45■□□□□ 0.7
CACNB3-201ENST00000301050 KIF16BQ96L93 1317 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 CYP2E1P05181 493 aaPredicted RBP19.44■□□□□ 0.7
CACNB3-201ENST00000301050 ZNF710Q8N1W2 664 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 NUCB2P80303 420 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 CBX1P83916 185 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 NGDNQ8NEJ9 315 aaKnown RBP19.44■□□□□ 0.7
CACNB3-201ENST00000301050 GPT2Q8TD30 523 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 TSC1Q92574 1164 aa19.44■□□□□ 0.7
CACNB3-201ENST00000301050 TBC1D9Q6ZT07 1266 aa19.43■□□□□ 0.7
CACNB3-201ENST00000301050 ZBTB40Q9NUA8 1239 aa19.43■□□□□ 0.7
CACNB3-201ENST00000301050 NFE2L2Q16236 605 aa19.43■□□□□ 0.7
CACNB3-201ENST00000301050 ANKLE2Q86XL3 938 aa19.43■□□□□ 0.7
CACNB3-201ENST00000301050 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
CACNB3-201ENST00000301050 ZNF142P52746 1687 aaPredicted RBP19.43■□□□□ 0.7
CACNB3-201ENST00000301050 IL16Q14005 1332 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 LRSAM1Q6UWE0 723 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
CACNB3-201ENST00000301050 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
CACNB3-201ENST00000301050 PRPF40AO75400 957 aaKnown RBP19.42■□□□□ 0.7
CACNB3-201ENST00000301050 KIF20AO95235 890 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 PDE4CQ08493 712 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 PKP1Q13835 747 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 BBXQ8WY36 941 aaPredicted RBP19.42■□□□□ 0.7
CACNB3-201ENST00000301050 NALCNQ8IZF0 1738 aa19.42■□□□□ 0.7
CACNB3-201ENST00000301050 KIAA2012Q0VF49 1180 aa19.41■□□□□ 0.7
CACNB3-201ENST00000301050 TMEM57Q8N5G2 664 aa19.41■□□□□ 0.7
CACNB3-201ENST00000301050 PEAK1Q9H792 1746 aa19.41■□□□□ 0.7
CACNB3-201ENST00000301050 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
CACNB3-201ENST00000301050 SSH1Q8WYL5 1049 aa19.4■□□□□ 0.7
CACNB3-201ENST00000301050 SYCE3A1L190 88 aa19.4■□□□□ 0.7
CACNB3-201ENST00000301050 ZBTB7CA1YPR0 619 aa19.4■□□□□ 0.7
CACNB3-201ENST00000301050 TMEM63CQ9P1W3 806 aa19.4■□□□□ 0.7
CACNB3-201ENST00000301050 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
CACNB3-201ENST00000301050 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.7
CACNB3-201ENST00000301050 GTF2E1P29083 439 aaPredicted RBP19.39■□□□□ 0.7
CACNB3-201ENST00000301050 ATP2B3Q16720 1220 aa19.39■□□□□ 0.69
CACNB3-201ENST00000301050 DNTTIP2Q5QJE6 756 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms