RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 CLIP2Q9UDT6 1046 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 FCHSD2O94868 740 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 ATP2B3Q16720 1220 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 LARP1BQ659C4 914 aaKnown RBP14.12□□□□□ -0.15
ERCC1-202ENST00000300853 CCDC83Q8IWF9 413 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 ABCC2Q92887 1545 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 POLR3GO15318 223 aaPredicted RBP14.12□□□□□ -0.15
ERCC1-202ENST00000300853 STX6O43752 255 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 IL16Q14005 1332 aa14.12□□□□□ -0.15
ERCC1-202ENST00000300853 NFE2L2Q16236 605 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 CEP135Q66GS9 1140 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 CWC15Q9P013 229 aaKnown RBP14.11□□□□□ -0.15
ERCC1-202ENST00000300853 PAXBP1Q9Y5B6 917 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 ZSCAN20P17040 1043 aaPredicted RBP14.11□□□□□ -0.15
ERCC1-202ENST00000300853 CEBPZQ03701 1054 aaKnown RBP14.11□□□□□ -0.15
ERCC1-202ENST00000300853 CCDC73Q6ZRK6 1079 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 KIF18AQ8NI77 898 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 GPATCH3Q96I76 525 aa14.11□□□□□ -0.15
ERCC1-202ENST00000300853 VGFO15240 615 aaPredicted RBP14.1□□□□□ -0.15
ERCC1-202ENST00000300853 NOL10Q9BSC4 688 aaKnown RBP14.1□□□□□ -0.15
ERCC1-202ENST00000300853 IL1RAPL2Q9NP60 686 aa14.1□□□□□ -0.15
ERCC1-202ENST00000300853 WDR7Q9Y4E6 1490 aa14.1□□□□□ -0.15
ERCC1-202ENST00000300853 GNAI2P04899 355 aa14.1□□□□□ -0.15
ERCC1-202ENST00000300853 GSPT1P15170 499 aaKnown RBP14.1□□□□□ -0.15
ERCC1-202ENST00000300853 FMNL2Q96PY5 1086 aa14.1□□□□□ -0.15
ERCC1-202ENST00000300853 DNAJC2Q99543 621 aaKnown RBP14.1□□□□□ -0.15
ERCC1-202ENST00000300853 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
ERCC1-202ENST00000300853 GABPB1Q06547 395 aaPredicted RBP14.1□□□□□ -0.15
ERCC1-202ENST00000300853 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
ERCC1-202ENST00000300853 SMTNL1A8MU46 457 aa14.09□□□□□ -0.15
ERCC1-202ENST00000300853 ZSCAN22P10073 491 aaPredicted RBP14.09□□□□□ -0.15
ERCC1-202ENST00000300853 PDCP20941 246 aa14.09□□□□□ -0.15
ERCC1-202ENST00000300853 DCTPP1Q9H773 170 aa14.09□□□□□ -0.15
ERCC1-202ENST00000300853 SURF6O75683 361 aaKnown RBP14.09□□□□□ -0.15
ERCC1-202ENST00000300853 TSPYL6Q8N831 410 aa14.09□□□□□ -0.15
ERCC1-202ENST00000300853 DDX54Q8TDD1 881 aaKnown RBP14.09□□□□□ -0.15
ERCC1-202ENST00000300853 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
ERCC1-202ENST00000300853 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
ERCC1-202ENST00000300853 MRPL50Q8N5N7 158 aaKnown RBP14.09□□□□□ -0.15
ERCC1-202ENST00000300853 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
ERCC1-202ENST00000300853 NLRP1Q9C000 1473 aa14.08□□□□□ -0.15
ERCC1-202ENST00000300853 SMC2O95347 1197 aa14.08□□□□□ -0.15
ERCC1-202ENST00000300853 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.15
ERCC1-202ENST00000300853 KIF2CQ99661 725 aa14.08□□□□□ -0.15
ERCC1-202ENST00000300853 TSPYL1Q9H0U9 437 aa14.08□□□□□ -0.15
ERCC1-202ENST00000300853 BRD1O95696 1058 aa14.08□□□□□ -0.16
ERCC1-202ENST00000300853 UBXN4Q92575 508 aa14.08□□□□□ -0.16
ERCC1-202ENST00000300853 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
ERCC1-202ENST00000300853 CASTP20810 708 aaKnown RBP14.08□□□□□ -0.16
ERCC1-202ENST00000300853 SDF4Q9BRK5 362 aa14.08□□□□□ -0.16
ERCC1-202ENST00000300853 ITSN2Q9NZM3 1697 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-202ENST00000300853 CNTROBQ8N137 903 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
ERCC1-202ENST00000300853 DDIT3P35638 169 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 ZNF165P49910 485 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
ERCC1-202ENST00000300853 TMCO3Q6UWJ1 677 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 TRIM34Q9BYJ4 488 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 CYP46A1Q9Y6A2 500 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 ANKRD44Q8N8A2 993 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 COG3Q96JB2 828 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 SRCIN1Q9C0H9 1055 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 LIMCH1Q9UPQ0 1083 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 TRIM35Q9UPQ4 493 aa14.07□□□□□ -0.16
ERCC1-202ENST00000300853 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 GNAI3P08754 354 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 DNM1Q05193 864 aaKnown RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 CWC27Q6UX04 472 aaKnown RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 ZNF397Q8NF99 534 aaPredicted RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 ESYT1Q9BSJ8 1104 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 MBIPQ9NS73 344 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 TSPYL4Q9UJ04 414 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 KINO60870 393 aaKnown RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 VAMP4O75379 141 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 PDE1AP54750 535 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 BMS1Q14692 1282 aaKnown RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 FAM177A1Q8N128 213 aaPredicted RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 INTS4Q96HW7 963 aaKnown RBP14.06□□□□□ -0.16
ERCC1-202ENST00000300853 ATAD2Q6PL18 1390 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 STK3Q13188 491 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 RAPGEF6Q8TEU7 1601 aa14.06□□□□□ -0.16
ERCC1-202ENST00000300853 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
ERCC1-202ENST00000300853 CLEC17AQ6ZS10 378 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 MEIS3Q99687 375 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 UBTFL1P0CB47 393 aaPredicted RBP14.05□□□□□ -0.16
ERCC1-202ENST00000300853 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 AK7Q96M32 723 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
ERCC1-202ENST00000300853 GJB2P29033 226 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 RNF20Q5VTR2 975 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 C14orf37Q86TY3 774 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 NUTM1Q86Y26 1132 aa14.05□□□□□ -0.16
ERCC1-202ENST00000300853 NAT10Q9H0A0 1025 aaKnown RBP14.04□□□□□ -0.16
ERCC1-202ENST00000300853 F6X3S4 739 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms