RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 TRAK2O60296 914 aa16.97■□□□□ 0.31
BCCIP-202ENST00000299130 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
BCCIP-202ENST00000299130 MSH6P52701 1360 aa16.97■□□□□ 0.31
BCCIP-202ENST00000299130 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
BCCIP-202ENST00000299130 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
BCCIP-202ENST00000299130 RIMS1Q86UR5 1692 aaKnown RBP16.96■□□□□ 0.31
BCCIP-202ENST00000299130 CRB1P82279 1406 aa16.96■□□□□ 0.31
BCCIP-202ENST00000299130 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
BCCIP-202ENST00000299130 ANKRD44Q8N8A2 993 aa16.96■□□□□ 0.31
BCCIP-202ENST00000299130 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.3
BCCIP-202ENST00000299130 CDC45O75419 566 aa16.96■□□□□ 0.3
BCCIP-202ENST00000299130 CEP85Q6P2H3 762 aa16.96■□□□□ 0.3
BCCIP-202ENST00000299130 MEIS3Q99687 375 aa16.96■□□□□ 0.3
BCCIP-202ENST00000299130 MAP3K19Q56UN5 1328 aa16.95■□□□□ 0.3
BCCIP-202ENST00000299130 NALCNQ8IZF0 1738 aa16.95■□□□□ 0.3
BCCIP-202ENST00000299130 APBB1O00213 710 aa16.95■□□□□ 0.3
BCCIP-202ENST00000299130 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
BCCIP-202ENST00000299130 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
BCCIP-202ENST00000299130 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
BCCIP-202ENST00000299130 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
BCCIP-202ENST00000299130 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
BCCIP-202ENST00000299130 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
BCCIP-202ENST00000299130 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
BCCIP-202ENST00000299130 FSD2A1L4K1 749 aa16.94■□□□□ 0.3
BCCIP-202ENST00000299130 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
BCCIP-202ENST00000299130 G2E3Q7L622 706 aa16.94■□□□□ 0.3
BCCIP-202ENST00000299130 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
BCCIP-202ENST00000299130 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
BCCIP-202ENST00000299130 RTL1A6NKG5 1358 aa16.93■□□□□ 0.3
BCCIP-202ENST00000299130 PANK2Q9BZ23 570 aa16.92■□□□□ 0.3
BCCIP-202ENST00000299130 GOLGA6L3A6NEY3 463 aa16.92■□□□□ 0.3
BCCIP-202ENST00000299130 F6X3S4 739 aa16.92■□□□□ 0.3
BCCIP-202ENST00000299130 K7ELQ4 463 aaPredicted RBP16.92■□□□□ 0.3
BCCIP-202ENST00000299130 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
BCCIP-202ENST00000299130 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
BCCIP-202ENST00000299130 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
BCCIP-202ENST00000299130 RPAP2Q8IXW5 612 aaPredicted RBP16.91■□□□□ 0.3
BCCIP-202ENST00000299130 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
BCCIP-202ENST00000299130 PTPRCP08575 1304 aa16.9■□□□□ 0.3
BCCIP-202ENST00000299130 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
BCCIP-202ENST00000299130 ARHGEF10O15013 1369 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.29
BCCIP-202ENST00000299130 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 HSP90AA1P07900 732 aaKnown RBP16.89■□□□□ 0.29
BCCIP-202ENST00000299130 SDSP20132 328 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 EYA1Q99502 592 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 TSPYL4Q9UJ04 414 aa16.89■□□□□ 0.29
BCCIP-202ENST00000299130 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.29
BCCIP-202ENST00000299130 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
BCCIP-202ENST00000299130 HAP1P54257 671 aaPredicted RBP16.88■□□□□ 0.29
BCCIP-202ENST00000299130 USP26Q9BXU7 913 aa16.88■□□□□ 0.29
BCCIP-202ENST00000299130 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
BCCIP-202ENST00000299130 SSFA2P28290 1259 aa16.87■□□□□ 0.29
BCCIP-202ENST00000299130 RRAGDQ9NQL2 400 aaPredicted RBP16.87■□□□□ 0.29
BCCIP-202ENST00000299130 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
BCCIP-202ENST00000299130 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
BCCIP-202ENST00000299130 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
BCCIP-202ENST00000299130 SBNO1A3KN83 1393 aa16.86■□□□□ 0.29
BCCIP-202ENST00000299130 FLT4P35916 1363 aa16.86■□□□□ 0.29
BCCIP-202ENST00000299130 TTC21AQ8NDW8 1320 aa16.86■□□□□ 0.29
BCCIP-202ENST00000299130 AMPHP49418 695 aa16.86■□□□□ 0.29
BCCIP-202ENST00000299130 KDRP35968 1356 aa16.85■□□□□ 0.29
BCCIP-202ENST00000299130 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
BCCIP-202ENST00000299130 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
BCCIP-202ENST00000299130 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
BCCIP-202ENST00000299130 PIK3C2AO00443 1686 aa16.83■□□□□ 0.29
BCCIP-202ENST00000299130 DIP2AQ14689 1571 aa16.83■□□□□ 0.29
BCCIP-202ENST00000299130 GBP4Q96PP9 640 aa16.83■□□□□ 0.28
BCCIP-202ENST00000299130 RABEP1Q15276 862 aa16.82■□□□□ 0.28
BCCIP-202ENST00000299130 TSHZ3Q63HK5 1081 aa16.82■□□□□ 0.28
BCCIP-202ENST00000299130 GAS2L3Q86XJ1 694 aa16.82■□□□□ 0.28
BCCIP-202ENST00000299130 AK9Q5TCS8 1911 aa16.82■□□□□ 0.28
BCCIP-202ENST00000299130 NLRP6P59044 892 aa16.82■□□□□ 0.28
BCCIP-202ENST00000299130 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
BCCIP-202ENST00000299130 TBX22Q9Y458 520 aa16.81■□□□□ 0.28
BCCIP-202ENST00000299130 CCT4P50991 539 aaKnown RBP16.81■□□□□ 0.28
BCCIP-202ENST00000299130 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
BCCIP-202ENST00000299130 MRE11P49959 708 aa16.8■□□□□ 0.28
BCCIP-202ENST00000299130 PDE1AP54750 535 aa16.8■□□□□ 0.28
BCCIP-202ENST00000299130 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
BCCIP-202ENST00000299130 PNMA6EA0A0J9YXQ4 647 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 HOXC9P31274 260 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 FLIIQ13045 1269 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 PKP1Q13835 747 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 ARHGAP23Q9P227 1491 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 SLIT1O75093 1534 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 HMMRO75330 724 aa16.79■□□□□ 0.28
BCCIP-202ENST00000299130 GNAI2P04899 355 aa16.78■□□□□ 0.28
BCCIP-202ENST00000299130 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
BCCIP-202ENST00000299130 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
BCCIP-202ENST00000299130 STK31Q9BXU1 1019 aa16.78■□□□□ 0.28
BCCIP-202ENST00000299130 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
BCCIP-202ENST00000299130 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
BCCIP-202ENST00000299130 MARF1Q9Y4F3 1742 aaKnown RBP16.77■□□□□ 0.28
BCCIP-202ENST00000299130 ZGPATQ8N5A5 531 aaKnown RBP16.77■□□□□ 0.28
BCCIP-202ENST00000299130 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
BCCIP-202ENST00000299130 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms