RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
RPUSD4-201ENST00000298317 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
RPUSD4-201ENST00000298317 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
RPUSD4-201ENST00000298317 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
RPUSD4-201ENST00000298317 IFT57Q9NWB7 429 aa16.45■□□□□ 0.22
RPUSD4-201ENST00000298317 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
RPUSD4-201ENST00000298317 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
RPUSD4-201ENST00000298317 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
RPUSD4-201ENST00000298317 NOLC1Q14978 699 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPUSD4-201ENST00000298317 UVSSAQ2YD98 709 aa16.44■□□□□ 0.22
RPUSD4-201ENST00000298317 FAM184AQ8NB25 1140 aa16.44■□□□□ 0.22
RPUSD4-201ENST00000298317 NPATQ14207 1427 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 PHF14O94880 888 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 TMX3Q96JJ7 454 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 GNAI1P63096 354 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 CUL4AQ13619 759 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 SPTLC3Q9NUV7 552 aa16.43■□□□□ 0.22
RPUSD4-201ENST00000298317 ASXL2Q76L83 1435 aa16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 ERC2O15083 957 aa16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 TSC1Q92574 1164 aa16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 MCM2P49736 904 aa16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
RPUSD4-201ENST00000298317 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
RPUSD4-201ENST00000298317 PPP4R3BQ5MIZ7 849 aa16.41■□□□□ 0.22
RPUSD4-201ENST00000298317 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
RPUSD4-201ENST00000298317 KIF20AO95235 890 aa16.4■□□□□ 0.22
RPUSD4-201ENST00000298317 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
RPUSD4-201ENST00000298317 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
RPUSD4-201ENST00000298317 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
RPUSD4-201ENST00000298317 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
RPUSD4-201ENST00000298317 TMEM51Q9NW97 253 aa16.4■□□□□ 0.22
RPUSD4-201ENST00000298317 ARHGEF40Q8TER5 1519 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 CBX1P83916 185 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 ZNF830Q96NB3 372 aaPredicted RBP16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 TERF2IPQ9NYB0 399 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 NEXMIFQ5QGS0 1516 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 NEK4P51957 841 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 CEP85Q6P2H3 762 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 USP25Q9UHP3 1055 aa16.39■□□□□ 0.21
RPUSD4-201ENST00000298317 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
RPUSD4-201ENST00000298317 ABCC3O15438 1527 aa16.38■□□□□ 0.21
RPUSD4-201ENST00000298317 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
RPUSD4-201ENST00000298317 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
RPUSD4-201ENST00000298317 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
RPUSD4-201ENST00000298317 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
RPUSD4-201ENST00000298317 RGS12O14924 1447 aa16.37■□□□□ 0.21
RPUSD4-201ENST00000298317 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
RPUSD4-201ENST00000298317 LETM1O95202 739 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-201ENST00000298317 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-201ENST00000298317 GADD45BO75293 160 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-201ENST00000298317 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-201ENST00000298317 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
RPUSD4-201ENST00000298317 ADCY5O95622 1261 aa16.36■□□□□ 0.21
RPUSD4-201ENST00000298317 C17orf53Q8N3J3 647 aaPredicted RBP16.36■□□□□ 0.21
RPUSD4-201ENST00000298317 OSBPL3Q9H4L5 887 aa16.36■□□□□ 0.21
RPUSD4-201ENST00000298317 TMEM87AQ8NBN3 555 aa16.36■□□□□ 0.21
RPUSD4-201ENST00000298317 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPUSD4-201ENST00000298317 MPNDQ8N594 471 aa16.35■□□□□ 0.21
RPUSD4-201ENST00000298317 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
RPUSD4-201ENST00000298317 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
RPUSD4-201ENST00000298317 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 PTPRMP28827 1452 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 ANKRD7Q92527 254 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 GDPD2Q9HCC8 539 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
RPUSD4-201ENST00000298317 CFAP65Q6ZU64 1925 aaKnown RBP16.33■□□□□ 0.21
RPUSD4-201ENST00000298317 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.21
RPUSD4-201ENST00000298317 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 ANAPC15P60006 121 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 PDCL2Q8N4E4 241 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 MSH6P52701 1360 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 HMOX1P09601 288 aa16.33■□□□□ 0.2
RPUSD4-201ENST00000298317 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 KIAA1524Q8TCG1 905 aa16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 HCLS1P14317 486 aaPredicted RBP16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 LMOD3Q0VAK6 560 aa16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
RPUSD4-201ENST00000298317 KDM4AO75164 1064 aa16.31■□□□□ 0.2
RPUSD4-201ENST00000298317 PDE1AP54750 535 aa16.31■□□□□ 0.2
RPUSD4-201ENST00000298317 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
RPUSD4-201ENST00000298317 ESYT1Q9BSJ8 1104 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms