RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ANKRD44Q8N8A2 993 aa30.22■■■□□ 2.43
SPTSSA-201ENST00000298130 TSHZ3Q63HK5 1081 aa30.21■■■□□ 2.43
SPTSSA-201ENST00000298130 NECTIN2Q92692 538 aa30.21■■■□□ 2.43
SPTSSA-201ENST00000298130 SLC26A8Q96RN1 970 aa30.21■■■□□ 2.43
SPTSSA-201ENST00000298130 SDSP20132 328 aa30.2■■■□□ 2.43
SPTSSA-201ENST00000298130 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.2■■■□□ 2.43
SPTSSA-201ENST00000298130 MRE11P49959 708 aa30.2■■■□□ 2.43
SPTSSA-201ENST00000298130 NRXN3Q9Y4C0 1643 aa30.2■■■□□ 2.42
SPTSSA-201ENST00000298130 RGS12O14924 1447 aa30.19■■■□□ 2.42
SPTSSA-201ENST00000298130 PKP1Q13835 747 aa30.19■■■□□ 2.42
SPTSSA-201ENST00000298130 CIZ1Q9ULV3 898 aaPredicted RBP30.18■■■□□ 2.42
SPTSSA-201ENST00000298130 ATP10DQ9P241 1426 aa30.18■■■□□ 2.42
SPTSSA-201ENST00000298130 SPATA31D1Q6ZQQ2 1576 aa30.18■■■□□ 2.42
SPTSSA-201ENST00000298130 USP26Q9BXU7 913 aa30.16■■■□□ 2.42
SPTSSA-201ENST00000298130 RTL1A6NKG5 1358 aa30.16■■■□□ 2.42
SPTSSA-201ENST00000298130 MTHFSDQ2M296 383 aaKnown RBP30.15■■■□□ 2.42
SPTSSA-201ENST00000298130 CHAMP1Q96JM3 812 aa30.15■■■□□ 2.42
SPTSSA-201ENST00000298130 AK9Q5TCS8 1911 aa30.14■■■□□ 2.42
SPTSSA-201ENST00000298130 MAP3K19Q56UN5 1328 aa30.14■■■□□ 2.42
SPTSSA-201ENST00000298130 TSPYL4Q9UJ04 414 aa30.14■■■□□ 2.41
SPTSSA-201ENST00000298130 PPP6R1Q9UPN7 881 aa30.14■■■□□ 2.41
SPTSSA-201ENST00000298130 RPAP2Q8IXW5 612 aaPredicted RBP30.13■■■□□ 2.41
SPTSSA-201ENST00000298130 LTKP29376 864 aa30.12■■■□□ 2.41
SPTSSA-201ENST00000298130 NUTM2GQ5VZR2 741 aa30.12■■■□□ 2.41
SPTSSA-201ENST00000298130 EXOC6BQ9Y2D4 811 aa30.12■■■□□ 2.41
SPTSSA-201ENST00000298130 ZGPATQ8N5A5 531 aaKnown RBP30.11■■■□□ 2.41
SPTSSA-201ENST00000298130 BAG4O95429 457 aaKnown RBP30.1■■■□□ 2.41
SPTSSA-201ENST00000298130 NCLP19338 710 aaKnown RBP30.1■■■□□ 2.41
SPTSSA-201ENST00000298130 CEBPAP49715 358 aaPredicted RBP30.1■■■□□ 2.41
SPTSSA-201ENST00000298130 FOXD4L5Q5VV16 416 aaPredicted RBP30.09■■■□□ 2.41
SPTSSA-201ENST00000298130 MCTP1Q6DN14 999 aa30.09■■■□□ 2.41
SPTSSA-201ENST00000298130 FOXD4L4Q8WXT5 416 aaPredicted RBP30.09■■■□□ 2.41
SPTSSA-201ENST00000298130 RABEP1Q15276 862 aa30.09■■■□□ 2.41
SPTSSA-201ENST00000298130 DDX49Q9Y6V7 483 aaKnown RBP30.09■■■□□ 2.41
SPTSSA-201ENST00000298130 RTF1Q92541 710 aaKnown RBP30.08■■■□□ 2.41
SPTSSA-201ENST00000298130 ERBB4Q15303 1308 aa30.07■■■□□ 2.4
SPTSSA-201ENST00000298130 C3P01024 1663 aa30.06■■■□□ 2.4
SPTSSA-201ENST00000298130 MON2Q7Z3U7 1717 aa30.06■■■□□ 2.4
SPTSSA-201ENST00000298130 HDGFP51858 240 aaKnown RBP30.06■■■□□ 2.4
SPTSSA-201ENST00000298130 DIP2BQ9P265 1576 aa30.05■■■□□ 2.4
SPTSSA-201ENST00000298130 AGLP35573 1532 aa30.05■■■□□ 2.4
SPTSSA-201ENST00000298130 CRB1P82279 1406 aa30.04■■■□□ 2.4
SPTSSA-201ENST00000298130 PTPRCP08575 1304 aa30.04■■■□□ 2.4
SPTSSA-201ENST00000298130 KIF24Q5T7B8 1368 aa30.04■■■□□ 2.4
SPTSSA-201ENST00000298130 NOL8Q76FK4 1167 aaKnown RBP30.03■■■□□ 2.4
SPTSSA-201ENST00000298130 LTV1Q96GA3 475 aaPredicted RBP30.03■■■□□ 2.4
SPTSSA-201ENST00000298130 NAP1L5Q96NT1 182 aaPredicted RBP30.03■■■□□ 2.4
SPTSSA-201ENST00000298130 TNRQ92752 1358 aa30.03■■■□□ 2.4
SPTSSA-201ENST00000298130 AMPHP49418 695 aa30.03■■■□□ 2.4
SPTSSA-201ENST00000298130 TMEM2Q9UHN6 1383 aa30.02■■■□□ 2.4
SPTSSA-201ENST00000298130 EYA1Q99502 592 aa30.02■■■□□ 2.4
SPTSSA-201ENST00000298130 OVOS2A0A0J9YW53 1432 aa30.01■■■□□ 2.4
SPTSSA-201ENST00000298130 OVOS2Q6IE36 1432 aa30.01■■■□□ 2.4
SPTSSA-201ENST00000298130 GOLGA6L22H0YM25 854 aa30.01■■■□□ 2.39
SPTSSA-201ENST00000298130 SKOR2Q2VWA4 1001 aaPredicted RBP30.01■■■□□ 2.39
SPTSSA-201ENST00000298130 NGDNQ8NEJ9 315 aaKnown RBP30.01■■■□□ 2.39
SPTSSA-201ENST00000298130 CASC1Q6TDU7 716 aa30.01■■■□□ 2.39
SPTSSA-201ENST00000298130 KIAA0232Q92628 1395 aa30.01■■■□□ 2.39
SPTSSA-201ENST00000298130 USP6P35125 1406 aa30.01■■■□□ 2.39
SPTSSA-201ENST00000298130 SIRT1Q96EB6 747 aa30■■■□□ 2.39
SPTSSA-201ENST00000298130 RIMS1Q86UR5 1692 aaKnown RBP30■■■□□ 2.39
SPTSSA-201ENST00000298130 HAP1P54257 671 aaPredicted RBP30■■■□□ 2.39
SPTSSA-201ENST00000298130 PDE1AP54750 535 aa30■■■□□ 2.39
SPTSSA-201ENST00000298130 PEAK1Q9H792 1746 aa30■■■□□ 2.39
SPTSSA-201ENST00000298130 PLEKHG3A1L390 1219 aa29.99■■■□□ 2.39
SPTSSA-201ENST00000298130 TECPR2O15040 1411 aa29.99■■■□□ 2.39
SPTSSA-201ENST00000298130 FKBP5Q13451 457 aaPredicted RBP29.99■■■□□ 2.39
SPTSSA-201ENST00000298130 ITSN1Q15811 1721 aa29.99■■■□□ 2.39
SPTSSA-201ENST00000298130 PNMA6EA0A0J9YXQ4 647 aa29.99■■■□□ 2.39
SPTSSA-201ENST00000298130 ADAMTS13Q76LX8 1427 aa29.99■■■□□ 2.39
SPTSSA-201ENST00000298130 CAVIN1Q6NZI2 390 aaKnown RBP29.98■■■□□ 2.39
SPTSSA-201ENST00000298130 TRIM44Q96DX7 344 aaPredicted RBP29.97■■■□□ 2.39
SPTSSA-201ENST00000298130 AKAP12Q02952 1782 aa29.97■■■□□ 2.39
SPTSSA-201ENST00000298130 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.97■■■□□ 2.39
SPTSSA-201ENST00000298130 HMMRO75330 724 aa29.96■■■□□ 2.39
SPTSSA-201ENST00000298130 ERC2O15083 957 aa29.96■■■□□ 2.39
SPTSSA-201ENST00000298130 RILPL2Q969X0 211 aa29.96■■■□□ 2.39
SPTSSA-201ENST00000298130 AMOTL2Q9Y2J4 779 aa29.96■■■□□ 2.39
SPTSSA-201ENST00000298130 ESPNB1AK53 854 aa29.95■■■□□ 2.39
SPTSSA-201ENST00000298130 CLCN1P35523 988 aa29.95■■■□□ 2.39
SPTSSA-201ENST00000298130 ST18O60284 1047 aa29.94■■■□□ 2.38
SPTSSA-201ENST00000298130 PRPF40AO75400 957 aaKnown RBP29.94■■■□□ 2.38
SPTSSA-201ENST00000298130 STK31Q9BXU1 1019 aa29.94■■■□□ 2.38
SPTSSA-201ENST00000298130 RBM27Q9P2N5 1060 aaKnown RBP29.94■■■□□ 2.38
SPTSSA-201ENST00000298130 GNAI2P04899 355 aa29.94■■■□□ 2.38
SPTSSA-201ENST00000298130 TRIM6-TRIM34B2RNG4 842 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 NEK4P51957 841 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 FLIIQ13045 1269 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 USHBP1Q8N6Y0 703 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 REC8O95072 547 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 KLHL40Q2TBA0 621 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 ZDHHC9Q9Y397 364 aa29.93■■■□□ 2.38
SPTSSA-201ENST00000298130 PLEKHG5O94827 1062 aa29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 NLRP6P59044 892 aa29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 PALD1Q9ULE6 856 aa29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 NRKQ7Z2Y5 1582 aa29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 CCT4P50991 539 aaKnown RBP29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 FOXD4L6Q3SYB3 417 aaPredicted RBP29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 FOXD4L3Q6VB84 417 aaPredicted RBP29.92■■■□□ 2.38
SPTSSA-201ENST00000298130 PTPRUQ92729 1446 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms