RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11B-201ENST00000297350 FBLN1P23142 703 aa12.49□□□□□ -0.41
TNFRSF11B-201ENST00000297350 PTMSP20962 102 aa12.49□□□□□ -0.41
TNFRSF11B-201ENST00000297350 SULT6B1Q6IMI4 303 aa12.49□□□□□ -0.41
TNFRSF11B-201ENST00000297350 CRB1P82279 1406 aa12.49□□□□□ -0.41
TNFRSF11B-201ENST00000297350 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 SLKQ9H2G2 1235 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 AMOTL2Q9Y2J4 779 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 RTL1A6NKG5 1358 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 CACNA1FO60840 1977 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 RGS12O14924 1447 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 RGPD8O14715 1765 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 SLC26A8Q96RN1 970 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 DCTPP1Q9H773 170 aa12.48□□□□□ -0.41
TNFRSF11B-201ENST00000297350 CDC45O75419 566 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 ATP10DQ9P241 1426 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 BABAM1Q9NWV8 329 aa12.47□□□□□ -0.41
TNFRSF11B-201ENST00000297350 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
TNFRSF11B-201ENST00000297350 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.41
TNFRSF11B-201ENST00000297350 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF11B-201ENST00000297350 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.42
TNFRSF11B-201ENST00000297350 ANKLE2Q86XL3 938 aa12.46□□□□□ -0.42
TNFRSF11B-201ENST00000297350 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
TNFRSF11B-201ENST00000297350 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
TNFRSF11B-201ENST00000297350 HMMRO75330 724 aa12.45□□□□□ -0.42
TNFRSF11B-201ENST00000297350 MCM4P33991 863 aa12.45□□□□□ -0.42
TNFRSF11B-201ENST00000297350 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
TNFRSF11B-201ENST00000297350 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
TNFRSF11B-201ENST00000297350 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
TNFRSF11B-201ENST00000297350 DDIT3P35638 169 aa12.44□□□□□ -0.42
TNFRSF11B-201ENST00000297350 CCT4P50991 539 aaKnown RBP12.44□□□□□ -0.42
TNFRSF11B-201ENST00000297350 AEBP1Q8IUX7 1158 aa12.44□□□□□ -0.42
TNFRSF11B-201ENST00000297350 MAP3K19Q56UN5 1328 aa12.44□□□□□ -0.42
TNFRSF11B-201ENST00000297350 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
TNFRSF11B-201ENST00000297350 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF11B-201ENST00000297350 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
TNFRSF11B-201ENST00000297350 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
TNFRSF11B-201ENST00000297350 ADGRL3Q9HAR2 1447 aa12.43□□□□□ -0.42
TNFRSF11B-201ENST00000297350 HSP90AB2PQ58FF8 381 aa12.42□□□□□ -0.42
TNFRSF11B-201ENST00000297350 CASC1Q6TDU7 716 aa12.42□□□□□ -0.42
TNFRSF11B-201ENST00000297350 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
TNFRSF11B-201ENST00000297350 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
TNFRSF11B-201ENST00000297350 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
TNFRSF11B-201ENST00000297350 DCTN1Q14203 1278 aa12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 PLEKHM2Q8IWE5 1019 aa12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 KCNA6P17658 529 aa12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 CEP85Q6P2H3 762 aa12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 MSH6P52701 1360 aa12.41□□□□□ -0.42
TNFRSF11B-201ENST00000297350 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
TNFRSF11B-201ENST00000297350 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
TNFRSF11B-201ENST00000297350 RABEP1Q15276 862 aa12.4□□□□□ -0.42
TNFRSF11B-201ENST00000297350 MCM10Q7L590 875 aa12.4□□□□□ -0.42
TNFRSF11B-201ENST00000297350 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF11B-201ENST00000297350 AMPHP49418 695 aa12.39□□□□□ -0.43
TNFRSF11B-201ENST00000297350 SKOR2Q2VWA4 1001 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF11B-201ENST00000297350 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
TNFRSF11B-201ENST00000297350 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
TNFRSF11B-201ENST00000297350 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
TNFRSF11B-201ENST00000297350 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
TNFRSF11B-201ENST00000297350 KIF2CQ99661 725 aa12.38□□□□□ -0.43
TNFRSF11B-201ENST00000297350 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
TNFRSF11B-201ENST00000297350 MAP3K5Q99683 1374 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 GNAI3P08754 354 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 GNAT3A8MTJ3 354 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 REC8O95072 547 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 RAB3GAP1Q15042 981 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 EYA1Q99502 592 aa12.37□□□□□ -0.43
TNFRSF11B-201ENST00000297350 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
TNFRSF11B-201ENST00000297350 GOLGA6L3A6NEY3 463 aa12.36□□□□□ -0.43
TNFRSF11B-201ENST00000297350 GNAI2P04899 355 aa12.36□□□□□ -0.43
TNFRSF11B-201ENST00000297350 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 TRAK2O60296 914 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 HOXC9P31274 260 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 LTN1O94822 1766 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 TUBGCP6Q96RT7 1819 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 HSP90AA1P07900 732 aaKnown RBP12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 HOXB7P09629 217 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 MEIS3Q99687 375 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
TNFRSF11B-201ENST00000297350 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
TNFRSF11B-201ENST00000297350 NLRP6P59044 892 aa12.34□□□□□ -0.43
TNFRSF11B-201ENST00000297350 AOX1Q06278 1338 aa12.34□□□□□ -0.43
TNFRSF11B-201ENST00000297350 LMTK3Q96Q04 1460 aa12.34□□□□□ -0.43
TNFRSF11B-201ENST00000297350 OVOS2A0A0G2JMS6 1433 aa12.33□□□□□ -0.43
TNFRSF11B-201ENST00000297350 GOLGA6L22H0YM25 854 aa12.33□□□□□ -0.43
TNFRSF11B-201ENST00000297350 KRT24Q2M2I5 525 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms