RNA–Protein interactions for RNA: ENST00000296446.12

PRKAR2A-202, Transcript of protein kinase cAMP-dependent type II regulatory subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PRKAR2A, Length 3,318 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR2A-202ENST00000296446 NLRP1Q9C000 1473 aa17.33■□□□□ 0.36
PRKAR2A-202ENST00000296446 A0A0G2JS52 829 aa17.32■□□□□ 0.36
PRKAR2A-202ENST00000296446 CCDC9Q9Y3X0 531 aaKnown RBP17.32■□□□□ 0.36
PRKAR2A-202ENST00000296446 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
PRKAR2A-202ENST00000296446 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
PRKAR2A-202ENST00000296446 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
PRKAR2A-202ENST00000296446 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
PRKAR2A-202ENST00000296446 MYO3AQ8NEV4 1616 aa17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 CSB-PGBD3P0DP91 1061 aa17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 KCNQ3O43525 872 aa17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
PRKAR2A-202ENST00000296446 TEFQ10587 303 aa17.3■□□□□ 0.36
PRKAR2A-202ENST00000296446 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
PRKAR2A-202ENST00000296446 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 PLEKHG3A1L390 1219 aa17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 CHL1O00533 1208 aa17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 ZNF853P0CG23 659 aa17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 HOXC9P31274 260 aa17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 COL3A1P02461 1466 aaPredicted RBP17.29■□□□□ 0.36
PRKAR2A-202ENST00000296446 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
PRKAR2A-202ENST00000296446 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
PRKAR2A-202ENST00000296446 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
PRKAR2A-202ENST00000296446 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 ZMYND15Q9H091 742 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 PTPRUQ92729 1446 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 AAMPQ13685 434 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 MSH6P52701 1360 aa17.27■□□□□ 0.36
PRKAR2A-202ENST00000296446 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.35
PRKAR2A-202ENST00000296446 XRCC6P12956 609 aaKnown RBP eCLIP17.27■□□□□ 0.35
PRKAR2A-202ENST00000296446 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.35
PRKAR2A-202ENST00000296446 GCC1Q96CN9 775 aa17.27■□□□□ 0.35
PRKAR2A-202ENST00000296446 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.35
PRKAR2A-202ENST00000296446 TBX22Q9Y458 520 aa17.27■□□□□ 0.35
PRKAR2A-202ENST00000296446 FLIIQ13045 1269 aa17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 NUTM1Q86Y26 1132 aa17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
PRKAR2A-202ENST00000296446 ATP7BP35670 1465 aa17.25■□□□□ 0.35
PRKAR2A-202ENST00000296446 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 HSPA2P54652 639 aa17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 USP6P35125 1406 aa17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
PRKAR2A-202ENST00000296446 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
PRKAR2A-202ENST00000296446 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
PRKAR2A-202ENST00000296446 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
PRKAR2A-202ENST00000296446 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
PRKAR2A-202ENST00000296446 MYL6BP14649 208 aa17.23■□□□□ 0.35
PRKAR2A-202ENST00000296446 HSP90AA2PQ14568 343 aaPredicted RBP17.22■□□□□ 0.35
PRKAR2A-202ENST00000296446 L1TD1Q5T7N2 865 aaKnown RBP17.22■□□□□ 0.35
PRKAR2A-202ENST00000296446 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
PRKAR2A-202ENST00000296446 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
PRKAR2A-202ENST00000296446 CHAMP1Q96JM3 812 aa17.22■□□□□ 0.35
PRKAR2A-202ENST00000296446 FLT4P35916 1363 aa17.22■□□□□ 0.35
PRKAR2A-202ENST00000296446 CDC45O75419 566 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 SDSP20132 328 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 ABCC4O15439 1325 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 HMMRO75330 724 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
PRKAR2A-202ENST00000296446 GOLGA6L3A6NEY3 463 aa17.21■□□□□ 0.34
PRKAR2A-202ENST00000296446 GNAI2P04899 355 aa17.21■□□□□ 0.34
PRKAR2A-202ENST00000296446 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.34
PRKAR2A-202ENST00000296446 PI4KAP2A4QPH2 592 aa17.2■□□□□ 0.34
PRKAR2A-202ENST00000296446 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
PRKAR2A-202ENST00000296446 PI4KAP1Q8N8J0 262 aa17.2■□□□□ 0.34
PRKAR2A-202ENST00000296446 GLIPR1L2Q4G1C9 344 aa17.2■□□□□ 0.34
PRKAR2A-202ENST00000296446 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
PRKAR2A-202ENST00000296446 CASC1Q6TDU7 716 aa17.19■□□□□ 0.34
PRKAR2A-202ENST00000296446 SIL1Q9H173 461 aa17.19■□□□□ 0.34
PRKAR2A-202ENST00000296446 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
PRKAR2A-202ENST00000296446 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
PRKAR2A-202ENST00000296446 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 SRGAP3O43295 1099 aa17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
PRKAR2A-202ENST00000296446 GCP02774 474 aa17.17■□□□□ 0.34
PRKAR2A-202ENST00000296446 C9orf78Q9NZ63 289 aaPredicted RBP17.17■□□□□ 0.34
PRKAR2A-202ENST00000296446 SPATA31D1Q6ZQQ2 1576 aa17.16■□□□□ 0.34
PRKAR2A-202ENST00000296446 INTS3Q68E01 1043 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms