RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
RUBCN-202ENST00000296343 USP19O94966 1318 aa16.61■□□□□ 0.25
RUBCN-202ENST00000296343 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
RUBCN-202ENST00000296343 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
RUBCN-202ENST00000296343 UPF2Q9HAU5 1272 aaKnown RBP16.6■□□□□ 0.25
RUBCN-202ENST00000296343 DIP2AQ14689 1571 aa16.6■□□□□ 0.25
RUBCN-202ENST00000296343 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
RUBCN-202ENST00000296343 FKBP5Q13451 457 aaPredicted RBP16.6■□□□□ 0.25
RUBCN-202ENST00000296343 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
RUBCN-202ENST00000296343 KCNQ3O43525 872 aa16.59■□□□□ 0.25
RUBCN-202ENST00000296343 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
RUBCN-202ENST00000296343 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
RUBCN-202ENST00000296343 TSHZ3Q63HK5 1081 aa16.59■□□□□ 0.25
RUBCN-202ENST00000296343 SBNO1A3KN83 1393 aa16.58■□□□□ 0.25
RUBCN-202ENST00000296343 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
RUBCN-202ENST00000296343 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.24
RUBCN-202ENST00000296343 HDAC1Q13547 482 aaPredicted RBP16.58■□□□□ 0.24
RUBCN-202ENST00000296343 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
RUBCN-202ENST00000296343 CHRNA2Q15822 529 aa16.57■□□□□ 0.24
RUBCN-202ENST00000296343 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
RUBCN-202ENST00000296343 AXIN2Q9Y2T1 843 aa16.57■□□□□ 0.24
RUBCN-202ENST00000296343 GCP02774 474 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
RUBCN-202ENST00000296343 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 SLIT1O75093 1534 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 MON2Q7Z3U7 1717 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 USP31Q70CQ4 1352 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
RUBCN-202ENST00000296343 ARXQ96QS3 562 aa16.55■□□□□ 0.24
RUBCN-202ENST00000296343 STK31Q9BXU1 1019 aa16.55■□□□□ 0.24
RUBCN-202ENST00000296343 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
RUBCN-202ENST00000296343 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
RUBCN-202ENST00000296343 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
RUBCN-202ENST00000296343 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
RUBCN-202ENST00000296343 NUCB1Q02818 461 aa16.54■□□□□ 0.24
RUBCN-202ENST00000296343 PTCH1Q13635 1447 aa16.54■□□□□ 0.24
RUBCN-202ENST00000296343 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
RUBCN-202ENST00000296343 MSH6P52701 1360 aa16.54■□□□□ 0.24
RUBCN-202ENST00000296343 EXOC6BQ9Y2D4 811 aa16.53■□□□□ 0.24
RUBCN-202ENST00000296343 ABCC4O15439 1325 aa16.53■□□□□ 0.24
RUBCN-202ENST00000296343 FRAT2O75474 233 aaPredicted RBP16.53■□□□□ 0.24
RUBCN-202ENST00000296343 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
RUBCN-202ENST00000296343 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.24
RUBCN-202ENST00000296343 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
RUBCN-202ENST00000296343 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
RUBCN-202ENST00000296343 AKAP12Q02952 1782 aa16.52■□□□□ 0.23
RUBCN-202ENST00000296343 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.23
RUBCN-202ENST00000296343 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.23
RUBCN-202ENST00000296343 KNDC1Q76NI1 1749 aa16.52■□□□□ 0.23
RUBCN-202ENST00000296343 NFKBIBQ15653 356 aa16.51■□□□□ 0.23
RUBCN-202ENST00000296343 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
RUBCN-202ENST00000296343 PIK3R4Q99570 1358 aa16.51■□□□□ 0.23
RUBCN-202ENST00000296343 TEFQ10587 303 aa16.5■□□□□ 0.23
RUBCN-202ENST00000296343 FLIIQ13045 1269 aa16.5■□□□□ 0.23
RUBCN-202ENST00000296343 AAMPQ13685 434 aa16.5■□□□□ 0.23
RUBCN-202ENST00000296343 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
RUBCN-202ENST00000296343 ATF3P18847 181 aa16.5■□□□□ 0.23
RUBCN-202ENST00000296343 ANKRD24Q8TF21 1146 aa16.5■□□□□ 0.23
RUBCN-202ENST00000296343 IP6K1Q92551 441 aa16.49■□□□□ 0.23
RUBCN-202ENST00000296343 CRB1P82279 1406 aa16.49■□□□□ 0.23
RUBCN-202ENST00000296343 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
RUBCN-202ENST00000296343 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
RUBCN-202ENST00000296343 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
RUBCN-202ENST00000296343 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
RUBCN-202ENST00000296343 ARHGEF10O15013 1369 aa16.48■□□□□ 0.23
RUBCN-202ENST00000296343 TBC1D2Q9BYX2 928 aa16.48■□□□□ 0.23
RUBCN-202ENST00000296343 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
RUBCN-202ENST00000296343 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
RUBCN-202ENST00000296343 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
RUBCN-202ENST00000296343 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
RUBCN-202ENST00000296343 PIK3C2AO00443 1686 aa16.47■□□□□ 0.23
RUBCN-202ENST00000296343 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
RUBCN-202ENST00000296343 BTBD11A6QL63 1104 aa16.46■□□□□ 0.23
RUBCN-202ENST00000296343 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
RUBCN-202ENST00000296343 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
RUBCN-202ENST00000296343 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
RUBCN-202ENST00000296343 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
RUBCN-202ENST00000296343 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
RUBCN-202ENST00000296343 INTS3Q68E01 1043 aaKnown RBP16.45■□□□□ 0.22
RUBCN-202ENST00000296343 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
RUBCN-202ENST00000296343 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
RUBCN-202ENST00000296343 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
RUBCN-202ENST00000296343 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
RUBCN-202ENST00000296343 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
RUBCN-202ENST00000296343 KDRP35968 1356 aa16.44■□□□□ 0.22
RUBCN-202ENST00000296343 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
RUBCN-202ENST00000296343 GSPT1P15170 499 aaKnown RBP16.44■□□□□ 0.22
RUBCN-202ENST00000296343 BECN1Q14457 450 aa16.44■□□□□ 0.22
RUBCN-202ENST00000296343 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
RUBCN-202ENST00000296343 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
RUBCN-202ENST00000296343 KCNH5Q8NCM2 988 aa16.43■□□□□ 0.22
RUBCN-202ENST00000296343 MAP4K4O95819 1239 aaPredicted RBP16.43■□□□□ 0.22
RUBCN-202ENST00000296343 JARID2Q92833 1246 aaPredicted RBP16.43■□□□□ 0.22
RUBCN-202ENST00000296343 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
RUBCN-202ENST00000296343 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
RUBCN-202ENST00000296343 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
RUBCN-202ENST00000296343 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms