RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
CCR1-201ENST00000296140 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
CCR1-201ENST00000296140 KLHL40Q2TBA0 621 aa11.9□□□□□ -0.5
CCR1-201ENST00000296140 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
CCR1-201ENST00000296140 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
CCR1-201ENST00000296140 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
CCR1-201ENST00000296140 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
CCR1-201ENST00000296140 RABEP1Q15276 862 aa11.89□□□□□ -0.51
CCR1-201ENST00000296140 FOXD4L5Q5VV16 416 aaPredicted RBP11.89□□□□□ -0.51
CCR1-201ENST00000296140 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
CCR1-201ENST00000296140 FOXD4L4Q8WXT5 416 aaPredicted RBP11.89□□□□□ -0.51
CCR1-201ENST00000296140 COG3Q96JB2 828 aa11.89□□□□□ -0.51
CCR1-201ENST00000296140 RBM27Q9P2N5 1060 aaKnown RBP11.89□□□□□ -0.51
CCR1-201ENST00000296140 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
CCR1-201ENST00000296140 INTS3Q68E01 1043 aaKnown RBP11.89□□□□□ -0.51
CCR1-201ENST00000296140 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
CCR1-201ENST00000296140 SOX12O15370 315 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
CCR1-201ENST00000296140 LMBRD1Q9NUN5 540 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 RTL1A6NKG5 1358 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 METP08581 1390 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 NUTM2FA1L443 756 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 GOLGA6L22H0YM25 854 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 MLECQ14165 292 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
CCR1-201ENST00000296140 CLEC17AQ6ZS10 378 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 ZDHHC9Q9Y397 364 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 F6X3S4 739 aa11.88□□□□□ -0.51
CCR1-201ENST00000296140 RIMBP3CA6NJZ7 1639 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 RIMBP3BA6NNM3 1639 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 RIMBP3Q9UFD9 1639 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 G2E3Q7L622 706 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
CCR1-201ENST00000296140 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 A2ML1A8K2U0 1454 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 ZSCAN23Q3MJ62 389 aa11.87□□□□□ -0.51
CCR1-201ENST00000296140 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 FOXO3O43524 673 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
CCR1-201ENST00000296140 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 GPT2Q8TD30 523 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 PPP1R9BQ96SB3 815 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 CCDC173Q0VFZ6 552 aa11.86□□□□□ -0.51
CCR1-201ENST00000296140 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 SETD1AO15047 1707 aaKnown RBP11.85□□□□□ -0.51
CCR1-201ENST00000296140 REREQ9P2R6 1566 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 CHL1O00533 1208 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 PTMSP20962 102 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
CCR1-201ENST00000296140 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 NOL8Q76FK4 1167 aaKnown RBP11.85□□□□□ -0.51
CCR1-201ENST00000296140 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
CCR1-201ENST00000296140 RPAP2Q8IXW5 612 aaPredicted RBP11.84□□□□□ -0.51
CCR1-201ENST00000296140 NUCB2P80303 420 aa11.84□□□□□ -0.51
CCR1-201ENST00000296140 HSP90AA2PQ14568 343 aaPredicted RBP11.84□□□□□ -0.51
CCR1-201ENST00000296140 EXOC6BQ9Y2D4 811 aa11.84□□□□□ -0.51
CCR1-201ENST00000296140 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
CCR1-201ENST00000296140 KIF24Q5T7B8 1368 aa11.84□□□□□ -0.51
CCR1-201ENST00000296140 ZNF445P59923 1031 aa11.83□□□□□ -0.52
CCR1-201ENST00000296140 TMEM63CQ9P1W3 806 aa11.83□□□□□ -0.52
CCR1-201ENST00000296140 PALD1Q9ULE6 856 aa11.83□□□□□ -0.52
CCR1-201ENST00000296140 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
CCR1-201ENST00000296140 KIAA1211Q6ZU35 1233 aa11.82□□□□□ -0.52
CCR1-201ENST00000296140 ZSCAN30Q86W11 494 aa11.82□□□□□ -0.52
CCR1-201ENST00000296140 ST18O60284 1047 aa11.82□□□□□ -0.52
CCR1-201ENST00000296140 PDE1AP54750 535 aa11.82□□□□□ -0.52
CCR1-201ENST00000296140 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCR1-201ENST00000296140 NRXN3Q9Y4C0 1643 aa11.82□□□□□ -0.52
CCR1-201ENST00000296140 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
CCR1-201ENST00000296140 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
CCR1-201ENST00000296140 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
CCR1-201ENST00000296140 SYCE3A1L190 88 aa11.81□□□□□ -0.52
CCR1-201ENST00000296140 ERC2O15083 957 aa11.81□□□□□ -0.52
CCR1-201ENST00000296140 NEK4P51957 841 aa11.81□□□□□ -0.52
CCR1-201ENST00000296140 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
CCR1-201ENST00000296140 CASC1Q6TDU7 716 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 C3P01024 1663 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 CRB1P82279 1406 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 MON2Q7Z3U7 1717 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 REC8O95072 547 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 RNF214Q8ND24 703 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 IL25Q9H293 177 aa11.8□□□□□ -0.52
CCR1-201ENST00000296140 PTPRCP08575 1304 aa11.79□□□□□ -0.52
CCR1-201ENST00000296140 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
CCR1-201ENST00000296140 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
CCR1-201ENST00000296140 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
CCR1-201ENST00000296140 ANP32BQ92688 251 aaKnown RBP11.79□□□□□ -0.52
CCR1-201ENST00000296140 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
CCR1-201ENST00000296140 RRP9O43818 475 aaKnown RBP11.79□□□□□ -0.52
CCR1-201ENST00000296140 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
CCR1-201ENST00000296140 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
CCR1-201ENST00000296140 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
CCR1-201ENST00000296140 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
CCR1-201ENST00000296140 NRKQ7Z2Y5 1582 aa11.78□□□□□ -0.52
CCR1-201ENST00000296140 ACEP12821 1306 aa11.78□□□□□ -0.52
CCR1-201ENST00000296140 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms