RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 LRRFIP2Q9Y608 721 aaKnown RBP16.21■□□□□ 0.19
RBM47-201ENST00000295971 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
RBM47-201ENST00000295971 ZNF530Q6P9A1 599 aaPredicted RBP16.21■□□□□ 0.19
RBM47-201ENST00000295971 USHBP1Q8N6Y0 703 aa16.21■□□□□ 0.19
RBM47-201ENST00000295971 RBM10P98175 930 aaKnown RBP16.21■□□□□ 0.19
RBM47-201ENST00000295971 SNX21Q969T3 373 aa16.21■□□□□ 0.19
RBM47-201ENST00000295971 SIL1Q9H173 461 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 FLIIQ13045 1269 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 ESCO1Q5FWF5 840 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 ANKRD44Q8N8A2 993 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 WDR33Q9C0J8 1336 aaKnown RBP16.2■□□□□ 0.18
RBM47-201ENST00000295971 BECN2A8MW95 431 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 NLRP2Q9NX02 1062 aa16.2■□□□□ 0.18
RBM47-201ENST00000295971 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
RBM47-201ENST00000295971 ACEP12821 1306 aa16.19■□□□□ 0.18
RBM47-201ENST00000295971 LARP6Q9BRS8 491 aaKnown RBP16.19■□□□□ 0.18
RBM47-201ENST00000295971 GDPD2Q9HCC8 539 aa16.19■□□□□ 0.18
RBM47-201ENST00000295971 PTPRCP08575 1304 aa16.19■□□□□ 0.18
RBM47-201ENST00000295971 DDX54Q8TDD1 881 aaKnown RBP16.19■□□□□ 0.18
RBM47-201ENST00000295971 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
RBM47-201ENST00000295971 EIF4A2Q14240 407 aaKnown RBP16.18■□□□□ 0.18
RBM47-201ENST00000295971 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
RBM47-201ENST00000295971 NEUROD6Q96NK8 337 aa16.18■□□□□ 0.18
RBM47-201ENST00000295971 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 SBNO2Q9Y2G9 1366 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 KLHL40Q2TBA0 621 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
RBM47-201ENST00000295971 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 MYO5CQ9NQX4 1742 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 KDM5AP29375 1690 aaKnown RBP16.17■□□□□ 0.18
RBM47-201ENST00000295971 PREX2Q70Z35 1606 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
RBM47-201ENST00000295971 FBXW7Q969H0 707 aa16.17■□□□□ 0.18
RBM47-201ENST00000295971 PPIP5K1Q6PFW1 1433 aa16.16■□□□□ 0.18
RBM47-201ENST00000295971 NPATQ14207 1427 aa16.16■□□□□ 0.18
RBM47-201ENST00000295971 JAKMIP1Q96N16 626 aaKnown RBP16.16■□□□□ 0.18
RBM47-201ENST00000295971 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
RBM47-201ENST00000295971 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
RBM47-201ENST00000295971 CEBPAP49715 358 aaPredicted RBP16.16■□□□□ 0.18
RBM47-201ENST00000295971 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
RBM47-201ENST00000295971 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
RBM47-201ENST00000295971 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
RBM47-201ENST00000295971 SYNMO15061 1565 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 FOXO3O43524 673 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 STK3Q13188 491 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
RBM47-201ENST00000295971 ZNF592Q92610 1267 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 TPM2P07951 284 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 PDE1AP54750 535 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
RBM47-201ENST00000295971 AACSQ86V21 672 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
RBM47-201ENST00000295971 AMOTL2Q9Y2J4 779 aa16.15■□□□□ 0.18
RBM47-201ENST00000295971 PSMA5P28066 241 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 CEP85Q6P2H3 762 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 KIF1BPQ96EK5 621 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 DNAJC2Q99543 621 aaKnown RBP16.14■□□□□ 0.17
RBM47-201ENST00000295971 TOMM22Q9NS69 142 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
RBM47-201ENST00000295971 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 ANXA1P04083 346 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
RBM47-201ENST00000295971 ZGPATQ8N5A5 531 aaKnown RBP16.14■□□□□ 0.17
RBM47-201ENST00000295971 SPC24Q8NBT2 197 aa16.14■□□□□ 0.17
RBM47-201ENST00000295971 RRAGDQ9NQL2 400 aaPredicted RBP16.14■□□□□ 0.17
RBM47-201ENST00000295971 FERMT3Q86UX7 667 aa16.13■□□□□ 0.17
RBM47-201ENST00000295971 THEMISQ8N1K5 641 aaPredicted RBP16.13■□□□□ 0.17
RBM47-201ENST00000295971 TRPM2O94759 1503 aa16.13■□□□□ 0.17
RBM47-201ENST00000295971 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
RBM47-201ENST00000295971 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
RBM47-201ENST00000295971 ABCC1P33527 1531 aa16.12■□□□□ 0.17
RBM47-201ENST00000295971 MYL6BP14649 208 aa16.12■□□□□ 0.17
RBM47-201ENST00000295971 LARP1BQ659C4 914 aaKnown RBP16.12■□□□□ 0.17
RBM47-201ENST00000295971 CEBPZQ03701 1054 aaKnown RBP16.12■□□□□ 0.17
RBM47-201ENST00000295971 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
RBM47-201ENST00000295971 IL13P35225 146 aa16.12■□□□□ 0.17
RBM47-201ENST00000295971 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
RBM47-201ENST00000295971 PDCP20941 246 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 ERC1Q8IUD2 1116 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 PDRG1Q9NUG6 133 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 CLCN1P35523 988 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 TPM4P67936 248 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 PPP1R42Q7Z4L9 355 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 PLEKHF1Q96S99 279 aa16.11■□□□□ 0.17
RBM47-201ENST00000295971 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
RBM47-201ENST00000295971 USP19O94966 1318 aa16.1■□□□□ 0.17
RBM47-201ENST00000295971 CPLX1O14810 134 aa16.1■□□□□ 0.17
RBM47-201ENST00000295971 MTHFSDQ2M296 383 aaKnown RBP16.1■□□□□ 0.17
RBM47-201ENST00000295971 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
RBM47-201ENST00000295971 ZFYVE9O95405 1425 aa16.1■□□□□ 0.17
RBM47-201ENST00000295971 GLRX3O76003 335 aaKnown RBP16.09■□□□□ 0.17
RBM47-201ENST00000295971 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 G2E3Q7L622 706 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 USP26Q9BXU7 913 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms