RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 PDAP1Q13442 181 aaKnown RBP11.88□□□□□ -0.51
CLRN1-201ENST00000295911 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
CLRN1-201ENST00000295911 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
CLRN1-201ENST00000295911 FBLN1P23142 703 aa11.87□□□□□ -0.51
CLRN1-201ENST00000295911 ZKSCAN2Q63HK3 967 aa11.87□□□□□ -0.51
CLRN1-201ENST00000295911 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
CLRN1-201ENST00000295911 MYT1Q01538 1121 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
CLRN1-201ENST00000295911 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
CLRN1-201ENST00000295911 HMOX1P09601 288 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 PDE4AP27815 886 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 ANP32AP39687 249 aaKnown RBP11.86□□□□□ -0.51
CLRN1-201ENST00000295911 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
CLRN1-201ENST00000295911 ALDH1L2Q3SY69 923 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
CLRN1-201ENST00000295911 PMFBP1Q8TBY8 1022 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
CLRN1-201ENST00000295911 COG6Q9Y2V7 657 aa11.86□□□□□ -0.51
CLRN1-201ENST00000295911 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
CLRN1-201ENST00000295911 GNAI1P63096 354 aa11.85□□□□□ -0.51
CLRN1-201ENST00000295911 BACH2Q9BYV9 841 aa11.85□□□□□ -0.51
CLRN1-201ENST00000295911 PEAK1Q9H792 1746 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
CLRN1-201ENST00000295911 KCNA6P17658 529 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 DZIP1LQ8IYY4 767 aaKnown RBP11.84□□□□□ -0.51
CLRN1-201ENST00000295911 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
CLRN1-201ENST00000295911 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
CLRN1-201ENST00000295911 BRPF1P55201 1214 aaPredicted RBP11.83□□□□□ -0.52
CLRN1-201ENST00000295911 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
CLRN1-201ENST00000295911 FTSJ3Q8IY81 847 aaKnown RBP11.83□□□□□ -0.52
CLRN1-201ENST00000295911 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
CLRN1-201ENST00000295911 EIF4A2Q14240 407 aaKnown RBP11.82□□□□□ -0.52
CLRN1-201ENST00000295911 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
CLRN1-201ENST00000295911 ERICH6Q7L0X2 663 aa11.82□□□□□ -0.52
CLRN1-201ENST00000295911 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
CLRN1-201ENST00000295911 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
CLRN1-201ENST00000295911 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
CLRN1-201ENST00000295911 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
CLRN1-201ENST00000295911 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
CLRN1-201ENST00000295911 MARF1Q9Y4F3 1742 aaKnown RBP11.81□□□□□ -0.52
CLRN1-201ENST00000295911 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
CLRN1-201ENST00000295911 ATF7IPQ6VMQ6 1270 aa11.81□□□□□ -0.52
CLRN1-201ENST00000295911 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
CLRN1-201ENST00000295911 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
CLRN1-201ENST00000295911 FLT4P35916 1363 aa11.81□□□□□ -0.52
CLRN1-201ENST00000295911 RLBP1P12271 317 aa11.8□□□□□ -0.52
CLRN1-201ENST00000295911 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
CLRN1-201ENST00000295911 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
CLRN1-201ENST00000295911 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
CLRN1-201ENST00000295911 CFAP44Q96MT7 982 aa11.8□□□□□ -0.52
CLRN1-201ENST00000295911 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
CLRN1-201ENST00000295911 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
CLRN1-201ENST00000295911 IGHDP01880 384 aa11.79□□□□□ -0.52
CLRN1-201ENST00000295911 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
CLRN1-201ENST00000295911 ARHGAP45Q92619 1136 aa11.79□□□□□ -0.52
CLRN1-201ENST00000295911 IPO9Q96P70 1041 aaKnown RBP11.79□□□□□ -0.52
CLRN1-201ENST00000295911 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
CLRN1-201ENST00000295911 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
CLRN1-201ENST00000295911 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
CLRN1-201ENST00000295911 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
CLRN1-201ENST00000295911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLRN1-201ENST00000295911 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
CLRN1-201ENST00000295911 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
CLRN1-201ENST00000295911 POTEMA6NI47 508 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 VAMP4O75379 141 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 TRIM27P14373 513 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 AMPHP49418 695 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 NLRP6P59044 892 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 HSP90AB2PQ58FF8 381 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 LTN1O94822 1766 aa11.77□□□□□ -0.52
CLRN1-201ENST00000295911 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
CLRN1-201ENST00000295911 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
CLRN1-201ENST00000295911 MBIPQ9NS73 344 aa11.77□□□□□ -0.53
CLRN1-201ENST00000295911 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.53
CLRN1-201ENST00000295911 NWD1Q149M9 1564 aa11.76□□□□□ -0.53
CLRN1-201ENST00000295911 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
CLRN1-201ENST00000295911 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
CLRN1-201ENST00000295911 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
CLRN1-201ENST00000295911 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
CLRN1-201ENST00000295911 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
CLRN1-201ENST00000295911 KDRP35968 1356 aa11.75□□□□□ -0.53
CLRN1-201ENST00000295911 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
CLRN1-201ENST00000295911 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
CLRN1-201ENST00000295911 ITPRIPQ8IWB1 547 aa11.75□□□□□ -0.53
CLRN1-201ENST00000295911 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
CLRN1-201ENST00000295911 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
CLRN1-201ENST00000295911 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
CLRN1-201ENST00000295911 RGS3P49796 1198 aa11.74□□□□□ -0.53
CLRN1-201ENST00000295911 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
CLRN1-201ENST00000295911 AEBP1Q8IUX7 1158 aa11.74□□□□□ -0.53
CLRN1-201ENST00000295911 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
CLRN1-201ENST00000295911 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
CLRN1-201ENST00000295911 IGSF1Q8N6C5 1336 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms