RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 GBP4Q96PP9 640 aa17■□□□□ 0.31
NCSTN-201ENST00000294785 ACEP12821 1306 aa16.99■□□□□ 0.31
NCSTN-201ENST00000294785 K7ELQ4 463 aaPredicted RBP16.99■□□□□ 0.31
NCSTN-201ENST00000294785 PLEKHM2Q8IWE5 1019 aa16.99■□□□□ 0.31
NCSTN-201ENST00000294785 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
NCSTN-201ENST00000294785 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
NCSTN-201ENST00000294785 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
NCSTN-201ENST00000294785 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
NCSTN-201ENST00000294785 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
NCSTN-201ENST00000294785 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
NCSTN-201ENST00000294785 CRB1P82279 1406 aa16.97■□□□□ 0.31
NCSTN-201ENST00000294785 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
NCSTN-201ENST00000294785 SKOR2Q2VWA4 1001 aaPredicted RBP16.97■□□□□ 0.31
NCSTN-201ENST00000294785 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
NCSTN-201ENST00000294785 MRE11P49959 708 aa16.96■□□□□ 0.3
NCSTN-201ENST00000294785 RTL1A6NKG5 1358 aa16.96■□□□□ 0.3
NCSTN-201ENST00000294785 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
NCSTN-201ENST00000294785 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
NCSTN-201ENST00000294785 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
NCSTN-201ENST00000294785 MSH6P52701 1360 aa16.95■□□□□ 0.3
NCSTN-201ENST00000294785 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
NCSTN-201ENST00000294785 RABEP1Q15276 862 aa16.95■□□□□ 0.3
NCSTN-201ENST00000294785 KDRP35968 1356 aa16.94■□□□□ 0.3
NCSTN-201ENST00000294785 MCM10Q7L590 875 aa16.93■□□□□ 0.3
NCSTN-201ENST00000294785 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
NCSTN-201ENST00000294785 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
NCSTN-201ENST00000294785 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
NCSTN-201ENST00000294785 FLT4P35916 1363 aa16.93■□□□□ 0.3
NCSTN-201ENST00000294785 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
NCSTN-201ENST00000294785 GZF1Q9H116 711 aaPredicted RBP16.93■□□□□ 0.3
NCSTN-201ENST00000294785 CD2BP2O95400 341 aaKnown RBP16.92■□□□□ 0.3
NCSTN-201ENST00000294785 HMMRO75330 724 aa16.92■□□□□ 0.3
NCSTN-201ENST00000294785 LRRC37A3O60309 1634 aa16.92■□□□□ 0.3
NCSTN-201ENST00000294785 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
NCSTN-201ENST00000294785 PTPRUQ92729 1446 aa16.9■□□□□ 0.3
NCSTN-201ENST00000294785 CCT4P50991 539 aaKnown RBP16.9■□□□□ 0.3
NCSTN-201ENST00000294785 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
NCSTN-201ENST00000294785 USP26Q9BXU7 913 aa16.9■□□□□ 0.3
NCSTN-201ENST00000294785 SLIT1O75093 1534 aa16.9■□□□□ 0.3
NCSTN-201ENST00000294785 CACNA1FO60840 1977 aa16.9■□□□□ 0.3
NCSTN-201ENST00000294785 DIP2AQ14689 1571 aa16.9■□□□□ 0.3
NCSTN-201ENST00000294785 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
NCSTN-201ENST00000294785 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
NCSTN-201ENST00000294785 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.29
NCSTN-201ENST00000294785 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
NCSTN-201ENST00000294785 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
NCSTN-201ENST00000294785 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
NCSTN-201ENST00000294785 MEIS3Q99687 375 aa16.89■□□□□ 0.29
NCSTN-201ENST00000294785 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
NCSTN-201ENST00000294785 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
NCSTN-201ENST00000294785 LTKP29376 864 aa16.88■□□□□ 0.29
NCSTN-201ENST00000294785 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
NCSTN-201ENST00000294785 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
NCSTN-201ENST00000294785 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
NCSTN-201ENST00000294785 ANO8Q9HCE9 1232 aaPredicted RBP16.88■□□□□ 0.29
NCSTN-201ENST00000294785 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
NCSTN-201ENST00000294785 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
NCSTN-201ENST00000294785 IGSF1Q8N6C5 1336 aa16.87■□□□□ 0.29
NCSTN-201ENST00000294785 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
NCSTN-201ENST00000294785 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
NCSTN-201ENST00000294785 REC8O95072 547 aa16.87■□□□□ 0.29
NCSTN-201ENST00000294785 SDSP20132 328 aa16.87■□□□□ 0.29
NCSTN-201ENST00000294785 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
NCSTN-201ENST00000294785 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
NCSTN-201ENST00000294785 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
NCSTN-201ENST00000294785 NUCB2P80303 420 aa16.86■□□□□ 0.29
NCSTN-201ENST00000294785 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
NCSTN-201ENST00000294785 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
NCSTN-201ENST00000294785 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
NCSTN-201ENST00000294785 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
NCSTN-201ENST00000294785 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
NCSTN-201ENST00000294785 ST18O60284 1047 aa16.84■□□□□ 0.29
NCSTN-201ENST00000294785 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
NCSTN-201ENST00000294785 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
NCSTN-201ENST00000294785 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
NCSTN-201ENST00000294785 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
NCSTN-201ENST00000294785 STK31Q9BXU1 1019 aa16.84■□□□□ 0.29
NCSTN-201ENST00000294785 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
NCSTN-201ENST00000294785 NUTM2FA1L443 756 aa16.83■□□□□ 0.29
NCSTN-201ENST00000294785 GNAI2P04899 355 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 ARXQ96QS3 562 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 RRAGDQ9NQL2 400 aaPredicted RBP16.83■□□□□ 0.28
NCSTN-201ENST00000294785 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 AMOTL2Q9Y2J4 779 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 ERC2O15083 957 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 SSFA2P28290 1259 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
NCSTN-201ENST00000294785 SMARCA5O60264 1052 aaPredicted RBP16.82■□□□□ 0.28
NCSTN-201ENST00000294785 AMPHP49418 695 aa16.82■□□□□ 0.28
NCSTN-201ENST00000294785 FOXO3O43524 673 aa16.82■□□□□ 0.28
NCSTN-201ENST00000294785 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
NCSTN-201ENST00000294785 EYA1Q99502 592 aa16.82■□□□□ 0.28
NCSTN-201ENST00000294785 MARF1Q9Y4F3 1742 aaKnown RBP16.81■□□□□ 0.28
NCSTN-201ENST00000294785 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
NCSTN-201ENST00000294785 GNAI3P08754 354 aa16.81■□□□□ 0.28
NCSTN-201ENST00000294785 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
NCSTN-201ENST00000294785 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
NCSTN-201ENST00000294785 PDE1AP54750 535 aa16.81■□□□□ 0.28
NCSTN-201ENST00000294785 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms