RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
VCAM1-201ENST00000294728 EXOSC9Q06265 439 aaKnown RBP7.73□□□□□ -1.17
VCAM1-201ENST00000294728 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
VCAM1-201ENST00000294728 IFT57Q9NWB7 429 aa7.73□□□□□ -1.17
VCAM1-201ENST00000294728 ZRANB1Q9UGI0 708 aa7.73□□□□□ -1.17
VCAM1-201ENST00000294728 METP08581 1390 aa7.73□□□□□ -1.17
VCAM1-201ENST00000294728 CACNA1FO60840 1977 aa7.73□□□□□ -1.17
VCAM1-201ENST00000294728 HDGFL2Q7Z4V5 671 aaPredicted RBP7.73□□□□□ -1.17
VCAM1-201ENST00000294728 TRPC5Q9UL62 973 aaPredicted RBP7.73□□□□□ -1.17
VCAM1-201ENST00000294728 HAP1P54257 671 aaPredicted RBP7.72□□□□□ -1.17
VCAM1-201ENST00000294728 POGKQ9P215 609 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 GOLGA6L3A6NEY3 463 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 CLCN1P35523 988 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 LMOD3Q0VAK6 560 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 NUTM2DQ5VT03 806 aaPredicted RBP7.72□□□□□ -1.17
VCAM1-201ENST00000294728 CHD1LQ86WJ1 897 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 HSCBQ8IWL3 235 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 BCL9LQ86UU0 1499 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 ZBTB7BO15156 539 aaPredicted RBP7.72□□□□□ -1.17
VCAM1-201ENST00000294728 TMEM132EQ6IEE7 984 aa7.72□□□□□ -1.17
VCAM1-201ENST00000294728 NOB1Q9ULX3 412 aaKnown RBP7.72□□□□□ -1.17
VCAM1-201ENST00000294728 RRP7AQ9Y3A4 280 aaKnown RBP7.72□□□□□ -1.17
VCAM1-201ENST00000294728 PXDNQ92626 1479 aa7.71□□□□□ -1.17
VCAM1-201ENST00000294728 RAB3GAP1Q15042 981 aa7.71□□□□□ -1.17
VCAM1-201ENST00000294728 TNNQ9UQP3 1299 aa7.71□□□□□ -1.17
VCAM1-201ENST00000294728 GLI3P10071 1580 aa7.71□□□□□ -1.18
VCAM1-201ENST00000294728 GNAI1P63096 354 aa7.71□□□□□ -1.18
VCAM1-201ENST00000294728 NFE2L2Q16236 605 aa7.71□□□□□ -1.18
VCAM1-201ENST00000294728 KLHL34Q8N239 644 aa7.71□□□□□ -1.18
VCAM1-201ENST00000294728 TMEM57Q8N5G2 664 aa7.71□□□□□ -1.18
VCAM1-201ENST00000294728 USP21Q9UK80 565 aa7.71□□□□□ -1.18
VCAM1-201ENST00000294728 KIAA0232Q92628 1395 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 RIPK4P57078 832 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 MRPL50Q8N5N7 158 aaKnown RBP7.7□□□□□ -1.18
VCAM1-201ENST00000294728 TRAK2O60296 914 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 GBP4Q96PP9 640 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 VAMP4O75379 141 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 XRCC6P12956 609 aaKnown RBP eCLIP7.7□□□□□ -1.18
VCAM1-201ENST00000294728 KIF2CQ99661 725 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 CABP2Q9NPB3 220 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 FMN2Q9NZ56 1722 aa7.7□□□□□ -1.18
VCAM1-201ENST00000294728 LRRC37A3O60309 1634 aa7.69□□□□□ -1.18
VCAM1-201ENST00000294728 CHGAP10645 457 aaKnown RBP7.69□□□□□ -1.18
VCAM1-201ENST00000294728 ITPRIPQ8IWB1 547 aa7.69□□□□□ -1.18
VCAM1-201ENST00000294728 DDX17Q92841 729 aaKnown RBP7.69□□□□□ -1.18
VCAM1-201ENST00000294728 IL17RAQ96F46 866 aa7.69□□□□□ -1.18
VCAM1-201ENST00000294728 API5Q9BZZ5 524 aaKnown RBP7.69□□□□□ -1.18
VCAM1-201ENST00000294728 BRWD3Q6RI45 1802 aa7.69□□□□□ -1.18
VCAM1-201ENST00000294728 SLIT2O94813 1529 aa7.69□□□□□ -1.18
VCAM1-201ENST00000294728 NEUROD2Q15784 382 aa7.69□□□□□ -1.18
VCAM1-201ENST00000294728 ANO8Q9HCE9 1232 aaPredicted RBP7.69□□□□□ -1.18
VCAM1-201ENST00000294728 TSR2Q969E8 191 aaKnown RBP7.68□□□□□ -1.18
VCAM1-201ENST00000294728 SLKQ9H2G2 1235 aaPredicted RBP7.68□□□□□ -1.18
VCAM1-201ENST00000294728 NWD2Q9ULI1 1742 aa7.68□□□□□ -1.18
VCAM1-201ENST00000294728 KIF1AQ12756 1690 aa7.68□□□□□ -1.18
VCAM1-201ENST00000294728 ARHGEF10O15013 1369 aa7.68□□□□□ -1.18
VCAM1-201ENST00000294728 EPB41L2O43491 1005 aaKnown RBP7.68□□□□□ -1.18
VCAM1-201ENST00000294728 IL13P35225 146 aa7.68□□□□□ -1.18
VCAM1-201ENST00000294728 POLKQ9UBT6 870 aa7.68□□□□□ -1.18
VCAM1-201ENST00000294728 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
VCAM1-201ENST00000294728 ADAMTS2O95450 1211 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 SRPK2P78362 688 aaKnown RBP7.67□□□□□ -1.18
VCAM1-201ENST00000294728 CDK19Q9BWU1 502 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 BCL2L13Q9BXK5 485 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 RTL1A6NKG5 1358 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 ROBO2Q9HCK4 1378 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 SOS1Q07889 1333 aaPredicted RBP7.67□□□□□ -1.18
VCAM1-201ENST00000294728 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
VCAM1-201ENST00000294728 HS1BP3Q53T59 392 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 PRAM1Q96QH2 718 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 DCTPP1Q9H773 170 aa7.67□□□□□ -1.18
VCAM1-201ENST00000294728 ABCA3Q99758 1704 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 ATP10DQ9P241 1426 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 PLCH1Q4KWH8 1693 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 CDC45O75419 566 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
VCAM1-201ENST00000294728 TERF1P54274 439 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 RABEP1Q15276 862 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 UBE2Q2Q8WVN8 375 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 GJD4Q96KN9 370 aaPredicted RBP7.66□□□□□ -1.18
VCAM1-201ENST00000294728 PPP1R9BQ96SB3 815 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 GRPEL1Q9HAV7 217 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 PTPRCP08575 1304 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
VCAM1-201ENST00000294728 RPAP2Q8IXW5 612 aaPredicted RBP7.66□□□□□ -1.18
VCAM1-201ENST00000294728 GGNBP2Q9H3C7 697 aa7.66□□□□□ -1.18
VCAM1-201ENST00000294728 CWC22Q9HCG8 908 aaKnown RBP7.66□□□□□ -1.18
VCAM1-201ENST00000294728 U2SURPO15042 1029 aaKnown RBP7.65□□□□□ -1.18
VCAM1-201ENST00000294728 CYP2E1P05181 493 aaPredicted RBP7.65□□□□□ -1.18
VCAM1-201ENST00000294728 TNPO1Q92973 898 aaKnown RBP7.65□□□□□ -1.18
VCAM1-201ENST00000294728 KLHL40Q2TBA0 621 aa7.65□□□□□ -1.18
VCAM1-201ENST00000294728 ORAI2Q96SN7 254 aa7.65□□□□□ -1.18
VCAM1-201ENST00000294728 OSBPL3Q9H4L5 887 aa7.65□□□□□ -1.18
VCAM1-201ENST00000294728 RRAGDQ9NQL2 400 aaPredicted RBP7.65□□□□□ -1.18
VCAM1-201ENST00000294728 NPHP3Q7Z494 1330 aa7.65□□□□□ -1.19
VCAM1-201ENST00000294728 PXDNLA1KZ92 1463 aa7.65□□□□□ -1.19
VCAM1-201ENST00000294728 FAM208AQ9UK61 1670 aaKnown RBP7.65□□□□□ -1.19
VCAM1-201ENST00000294728 USP31Q70CQ4 1352 aa7.65□□□□□ -1.19
VCAM1-201ENST00000294728 OVOS2A0A0J9YW53 1432 aa7.65□□□□□ -1.19
VCAM1-201ENST00000294728 OVOS2Q6IE36 1432 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms