RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CHL1O00533 1208 aa11.76□□□□□ -0.53
PDPN-201ENST00000294489 TCERG1O14776 1098 aaKnown RBP11.76□□□□□ -0.53
PDPN-201ENST00000294489 NBPF6Q5VWK0 638 aa11.76□□□□□ -0.53
PDPN-201ENST00000294489 CENPQQ7L2Z9 268 aaPredicted RBP11.76□□□□□ -0.53
PDPN-201ENST00000294489 NBPF4Q96M43 638 aa11.76□□□□□ -0.53
PDPN-201ENST00000294489 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
PDPN-201ENST00000294489 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
PDPN-201ENST00000294489 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
PDPN-201ENST00000294489 KIAA0232Q92628 1395 aa11.75□□□□□ -0.53
PDPN-201ENST00000294489 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
PDPN-201ENST00000294489 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
PDPN-201ENST00000294489 ROBO1Q9Y6N7 1651 aa11.75□□□□□ -0.53
PDPN-201ENST00000294489 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
PDPN-201ENST00000294489 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
PDPN-201ENST00000294489 MAP3K5Q99683 1374 aa11.74□□□□□ -0.53
PDPN-201ENST00000294489 VAMP4O75379 141 aa11.74□□□□□ -0.53
PDPN-201ENST00000294489 BCL2L13Q9BXK5 485 aa11.74□□□□□ -0.53
PDPN-201ENST00000294489 MS4A1P11836 297 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 AAMPQ13685 434 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 CEMIPQ8WUJ3 1361 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 ERBB3P21860 1342 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 DCTN1Q14203 1278 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 SSH1Q8WYL5 1049 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
PDPN-201ENST00000294489 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
PDPN-201ENST00000294489 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
PDPN-201ENST00000294489 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
PDPN-201ENST00000294489 CACNA1FO60840 1977 aa11.72□□□□□ -0.53
PDPN-201ENST00000294489 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
PDPN-201ENST00000294489 MCM10Q7L590 875 aa11.71□□□□□ -0.53
PDPN-201ENST00000294489 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
PDPN-201ENST00000294489 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
PDPN-201ENST00000294489 PARP4Q9UKK3 1724 aaKnown RBP11.71□□□□□ -0.53
PDPN-201ENST00000294489 LTV1Q96GA3 475 aaPredicted RBP11.71□□□□□ -0.53
PDPN-201ENST00000294489 LMOD2Q6P5Q4 547 aa11.71□□□□□ -0.54
PDPN-201ENST00000294489 FTSJ3Q8IY81 847 aaKnown RBP11.7□□□□□ -0.54
PDPN-201ENST00000294489 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
PDPN-201ENST00000294489 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
PDPN-201ENST00000294489 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
PDPN-201ENST00000294489 USHBP1Q8N6Y0 703 aa11.7□□□□□ -0.54
PDPN-201ENST00000294489 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
PDPN-201ENST00000294489 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
PDPN-201ENST00000294489 ARHGAP45Q92619 1136 aa11.7□□□□□ -0.54
PDPN-201ENST00000294489 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
PDPN-201ENST00000294489 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
PDPN-201ENST00000294489 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
PDPN-201ENST00000294489 RLBP1P12271 317 aa11.69□□□□□ -0.54
PDPN-201ENST00000294489 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
PDPN-201ENST00000294489 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
PDPN-201ENST00000294489 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
PDPN-201ENST00000294489 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
PDPN-201ENST00000294489 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
PDPN-201ENST00000294489 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
PDPN-201ENST00000294489 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
PDPN-201ENST00000294489 SHANK3Q9BYB0 1731 aa11.68□□□□□ -0.54
PDPN-201ENST00000294489 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
PDPN-201ENST00000294489 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
PDPN-201ENST00000294489 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
PDPN-201ENST00000294489 TRIM27P14373 513 aa11.67□□□□□ -0.54
PDPN-201ENST00000294489 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
PDPN-201ENST00000294489 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
PDPN-201ENST00000294489 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
PDPN-201ENST00000294489 COL5A2P05997 1499 aaPredicted RBP11.67□□□□□ -0.54
PDPN-201ENST00000294489 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
PDPN-201ENST00000294489 PLEKHO1Q53GL0 409 aaPredicted RBP11.67□□□□□ -0.54
PDPN-201ENST00000294489 NOB1Q9ULX3 412 aaKnown RBP11.67□□□□□ -0.54
PDPN-201ENST00000294489 MRC1P22897 1456 aa11.67□□□□□ -0.54
PDPN-201ENST00000294489 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
PDPN-201ENST00000294489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDPN-201ENST00000294489 MEGF6O75095 1541 aa11.66□□□□□ -0.54
PDPN-201ENST00000294489 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
PDPN-201ENST00000294489 PLCH1Q4KWH8 1693 aa11.66□□□□□ -0.54
PDPN-201ENST00000294489 RGS12O14924 1447 aa11.65□□□□□ -0.54
PDPN-201ENST00000294489 PDE4AP27815 886 aa11.65□□□□□ -0.54
PDPN-201ENST00000294489 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.54
PDPN-201ENST00000294489 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
PDPN-201ENST00000294489 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
PDPN-201ENST00000294489 ABCC4O15439 1325 aa11.64□□□□□ -0.55
PDPN-201ENST00000294489 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
PDPN-201ENST00000294489 IGHDP01880 384 aa11.64□□□□□ -0.55
PDPN-201ENST00000294489 BACH2Q9BYV9 841 aa11.64□□□□□ -0.55
PDPN-201ENST00000294489 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
PDPN-201ENST00000294489 ANP32AP39687 249 aaKnown RBP11.63□□□□□ -0.55
PDPN-201ENST00000294489 TSPYL4Q9UJ04 414 aa11.63□□□□□ -0.55
PDPN-201ENST00000294489 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
PDPN-201ENST00000294489 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
PDPN-201ENST00000294489 ITPRIPQ8IWB1 547 aa11.63□□□□□ -0.55
PDPN-201ENST00000294489 RWDD1Q9H446 243 aaPredicted RBP11.63□□□□□ -0.55
PDPN-201ENST00000294489 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
PDPN-201ENST00000294489 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
PDPN-201ENST00000294489 NRAPQ86VF7 1730 aa11.62□□□□□ -0.55
PDPN-201ENST00000294489 CHRNA2Q15822 529 aa11.62□□□□□ -0.55
PDPN-201ENST00000294489 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
PDPN-201ENST00000294489 PAPPAQ13219 1627 aa11.62□□□□□ -0.55
PDPN-201ENST00000294489 KDM6AO15550 1401 aaPredicted RBP11.62□□□□□ -0.55
PDPN-201ENST00000294489 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms