RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 CHMP4CQ96CF2 233 aa16.36■□□□□ 0.21
RDH13-201ENST00000291892 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
RDH13-201ENST00000291892 CHGAP10645 457 aaKnown RBP16.35■□□□□ 0.21
RDH13-201ENST00000291892 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
RDH13-201ENST00000291892 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 KIF18AQ8NI77 898 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 NRBP1Q9UHY1 535 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 KRT222Q8N1A0 295 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
RDH13-201ENST00000291892 NOS1P29475 1434 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 REC8O95072 547 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 TMX1Q9H3N1 280 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 KANK1Q14678 1352 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 SHPRHQ149N8 1683 aa16.34■□□□□ 0.21
RDH13-201ENST00000291892 TCHHQ07283 1943 aa16.33■□□□□ 0.21
RDH13-201ENST00000291892 KDM5AP29375 1690 aaKnown RBP16.33■□□□□ 0.21
RDH13-201ENST00000291892 CD109Q6YHK3 1445 aa16.33■□□□□ 0.21
RDH13-201ENST00000291892 TPD52L1Q16890 204 aaPredicted RBP16.33■□□□□ 0.21
RDH13-201ENST00000291892 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
RDH13-201ENST00000291892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.33■□□□□ 0.2
RDH13-201ENST00000291892 SRCIN1Q9C0H9 1055 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 GOLGA6L6A8MZA4 724 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 ERC2O15083 957 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 MX1P20591 662 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
RDH13-201ENST00000291892 CAMK4Q16566 473 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 ADGRF5Q8IZF2 1346 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 TNNT3P45378 269 aaPredicted RBP16.32■□□□□ 0.2
RDH13-201ENST00000291892 GTF3C6Q969F1 213 aa16.32■□□□□ 0.2
RDH13-201ENST00000291892 ANKRD36BQ8N2N9 1353 aa16.31■□□□□ 0.2
RDH13-201ENST00000291892 KMT5BQ4FZB7 885 aa16.31■□□□□ 0.2
RDH13-201ENST00000291892 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
RDH13-201ENST00000291892 LUZP1Q86V48 1076 aa16.3■□□□□ 0.2
RDH13-201ENST00000291892 CEP152O94986 1710 aa16.3■□□□□ 0.2
RDH13-201ENST00000291892 CDC42BPBQ9Y5S2 1711 aa16.3■□□□□ 0.2
RDH13-201ENST00000291892 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
RDH13-201ENST00000291892 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
RDH13-201ENST00000291892 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
RDH13-201ENST00000291892 SMTNL1A8MU46 457 aa16.29■□□□□ 0.2
RDH13-201ENST00000291892 ELF2Q15723 593 aa16.29■□□□□ 0.2
RDH13-201ENST00000291892 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
RDH13-201ENST00000291892 ZNF215Q9UL58 517 aaPredicted RBP16.29■□□□□ 0.2
RDH13-201ENST00000291892 MORC2Q9Y6X9 1032 aaPredicted RBP16.29■□□□□ 0.2
RDH13-201ENST00000291892 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
RDH13-201ENST00000291892 ARHGEF5Q12774 1597 aa16.28■□□□□ 0.2
RDH13-201ENST00000291892 HNRNPH2P55795 449 aaKnown RBP16.28■□□□□ 0.2
RDH13-201ENST00000291892 RILPL2Q969X0 211 aa16.28■□□□□ 0.2
RDH13-201ENST00000291892 MADDQ8WXG6 1647 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 FBLN1P23142 703 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 FBXO38Q6PIJ6 1188 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 PLEKHF1Q96S99 279 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 TRIM5Q9C035 493 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.2
RDH13-201ENST00000291892 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
RDH13-201ENST00000291892 MRPL50Q8N5N7 158 aaKnown RBP16.27■□□□□ 0.2
RDH13-201ENST00000291892 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
RDH13-201ENST00000291892 WDR33Q9C0J8 1336 aaKnown RBP16.27■□□□□ 0.19
RDH13-201ENST00000291892 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.19
RDH13-201ENST00000291892 POLR3GO15318 223 aaPredicted RBP16.26■□□□□ 0.19
RDH13-201ENST00000291892 HMOX1P09601 288 aa16.26■□□□□ 0.19
RDH13-201ENST00000291892 NEK11Q8NG66 645 aa16.25■□□□□ 0.19
RDH13-201ENST00000291892 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
RDH13-201ENST00000291892 CEP135Q66GS9 1140 aa16.25■□□□□ 0.19
RDH13-201ENST00000291892 NOL10Q9BSC4 688 aaKnown RBP16.25■□□□□ 0.19
RDH13-201ENST00000291892 USP27XA6NNY8 438 aa16.24■□□□□ 0.19
RDH13-201ENST00000291892 VAMP4O75379 141 aa16.24■□□□□ 0.19
RDH13-201ENST00000291892 PTPRTO14522 1441 aa16.24■□□□□ 0.19
RDH13-201ENST00000291892 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
RDH13-201ENST00000291892 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
RDH13-201ENST00000291892 UBE2HP62256 183 aa16.24■□□□□ 0.19
RDH13-201ENST00000291892 DNM1Q05193 864 aaKnown RBP16.24■□□□□ 0.19
RDH13-201ENST00000291892 ARID5BQ14865 1188 aa16.24■□□□□ 0.19
RDH13-201ENST00000291892 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
RDH13-201ENST00000291892 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
RDH13-201ENST00000291892 MLECQ14165 292 aa16.23■□□□□ 0.19
RDH13-201ENST00000291892 RAD51AP2Q09MP3 1159 aa16.23■□□□□ 0.19
RDH13-201ENST00000291892 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
RDH13-201ENST00000291892 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
RDH13-201ENST00000291892 MCCP23508 829 aa16.22■□□□□ 0.19
RDH13-201ENST00000291892 PRKAR2BP31323 418 aa16.22■□□□□ 0.19
RDH13-201ENST00000291892 CUL4AQ13619 759 aa16.22■□□□□ 0.19
RDH13-201ENST00000291892 TPM3P06753 285 aa16.22■□□□□ 0.19
RDH13-201ENST00000291892 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
RDH13-201ENST00000291892 VPS37CA5D8V6 355 aaPredicted RBP16.21■□□□□ 0.19
RDH13-201ENST00000291892 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
RDH13-201ENST00000291892 RSPH14Q9UHP6 348 aa16.21■□□□□ 0.19
RDH13-201ENST00000291892 KIF3BO15066 747 aa16.21■□□□□ 0.19
RDH13-201ENST00000291892 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
RDH13-201ENST00000291892 CACTINQ8WUQ7 758 aaKnown RBP16.21■□□□□ 0.19
RDH13-201ENST00000291892 ZCCHC11Q5TAX3 1644 aaKnown RBP16.21■□□□□ 0.19
RDH13-201ENST00000291892 PREX2Q70Z35 1606 aa16.21■□□□□ 0.19
RDH13-201ENST00000291892 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms